vOTU-006793

Overview

vOTU representative UHGV-0392016

No. of genomes 5

Genome length 35,195 bps

Completeness 100.00% (complete)

Host Erysipelatoclostridium ramosum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-006793
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-01076 › vGENUS-01346 › vSUBGEN-13644 › vOTU-006793
Host taxonomy	Bacteria › Firmicutes › Bacilli › Erysipelotrichales › Coprobacillaceae › Erysipelatoclostridium › Erysipelatoclostridium ramosum
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0392016
BioSample	NA
Genome length	35,195 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	59
CDS density	93.80%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0392016_2	eggNOG-mapper	428127.EUBDOL_01238	NA	NA
UHGV-0392016_4	eggNOG-mapper	1235799.C818_00262	NA	NA
UHGV-0392016_6	UniRef90	UniRef90_A0A7U9CJ41	Phosphagen kinase N-terminal domain-containing protein	NA
UHGV-0392016_10	UniRef90	UniRef90_A0A3E3EF98	Helix-turn-helix domain-containing protein	NA
UHGV-0392016_10	eggNOG-mapper	428125.CLOLEP_01805	NA	NA
UHGV-0392016_10	Structural annotation	PF13542	NA	NA
UHGV-0392016_11	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0392016_11	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0392016_11	UniRef90	UniRef90_A0A6N3ALZ5	Terminase-like family protein	NA
UHGV-0392016_11	eggNOG-mapper	642492.Clole_0814	Phage terminase, large subunit, PBSX family	NA
UHGV-0392016_11	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0392016_11	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0392016_11	COG	COG1783	Phage terminase large subunit	NA
UHGV-0392016_11	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0392016_12	PHROG	phrog_533	portal protein	head and packaging
UHGV-0392016_12	UniRef90	UniRef90_A0A6N3AB16	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0392016_12	eggNOG-mapper	428125.CLOLEP_01803	NA	NA
UHGV-0392016_12	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0392016_12	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0392016_12	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0392016_13	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0392016_13	UniRef90	UniRef90_A0A6N3A974	Phage minor capsid protein 2	NA
UHGV-0392016_13	eggNOG-mapper	428125.CLOLEP_01802	NA	NA
UHGV-0392016_13	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0392016_13	COG	COG2369	NA	NA
UHGV-0392016_13	Structural annotation	PF06152	NA	NA
UHGV-0392016_15	eggNOG-mapper	596323.HMPREF0554_1580	Belongs to the Dps family	NA
UHGV-0392016_15	COG	COG0783	DNA-binding ferritin-like protein (oxidative damage protectant)	NA
UHGV-0392016_15	Structural annotation	PF14530, MF_01441, NF009990, COG0783	NA	NA
UHGV-0392016_17	PHROG	phrog_422	major head protein	head and packaging
UHGV-0392016_17	UniRef90	UniRef90_A0A316T938	S-l_SbsC_C domain-containing protein	NA
UHGV-0392016_17	eggNOG-mapper	428125.CLOLEP_00183	COG NOG28280 non supervised orthologous group	NA
UHGV-0392016_17	Structural annotation	PF19821, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0392016_18	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0392016_18	eggNOG-mapper	1497679.EP56_07555	NA	NA
UHGV-0392016_19	UniRef90	UniRef90_UPI001D06E7F2	minor capsid protein	NA
UHGV-0392016_19	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0392016_20	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0392016_20	UniRef90	UniRef90_A0A6N3ACU8	Minor capsid protein	NA
UHGV-0392016_20	eggNOG-mapper	1027396.LMOSA_9610	Minor capsid protein	NA
UHGV-0392016_20	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0392016_20	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0392016_21	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0392016_21	Structural annotation	PF12691	NA	NA
UHGV-0392016_22	PHROG	phrog_820	major tail protein	tail
UHGV-0392016_22	UniRef90	UniRef90_A0A3A6EPU8	S-l_SbsC_C domain-containing protein	NA
UHGV-0392016_22	eggNOG-mapper	428125.CLOLEP_00178	Belongs to the glycosyl hydrolase family 6	NA
UHGV-0392016_22	COG	COG5492	NA	NA
UHGV-0392016_22	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0392016_23	Structural annotation	PF10666	NA	NA
UHGV-0392016_24	PHROG	phrog_706	NA	unknown function
UHGV-0392016_24	UniRef90	UniRef90_A0A6N3ADJ1	Bacteriophage Gp15 protein	NA
UHGV-0392016_24	eggNOG-mapper	428125.CLOLEP_01787	Bacteriophage Gp15 protein	NA
UHGV-0392016_24	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0392016_24	Structural annotation	PF06854	NA	NA
UHGV-0392016_25	KOfam	K10398	KIF11, EG5; kinesin family member 11	NA
UHGV-0392016_25	PHROG	phrog_5218	NA	unknown function
UHGV-0392016_25	UniRef90	UniRef90_A0A6N3ADB1	Phage-related minor tail protein	NA
UHGV-0392016_25	eggNOG-mapper	658655.HMPREF0988_00531	Phage-related minor tail protein	NA
UHGV-0392016_25	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0392016_25	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0392016_25	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0392016_26	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0392016_26	eggNOG-mapper	411490.ANACAC_00709	phage tail	NA
UHGV-0392016_26	COG	COG4722	Phage-related protein YomH	NA
UHGV-0392016_26	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-0392016_27	PHROG	phrog_3558	tail protein	tail
UHGV-0392016_27	UniRef90	UniRef90_A0A6N3AEF7	Peptidase S74 domain-containing protein	NA
UHGV-0392016_27	eggNOG-mapper	610130.Closa_0754	NA	NA
UHGV-0392016_27	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0392016_27	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0392016_27	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0392016_27	COG	COG4926	Phage-related protein	NA
UHGV-0392016_27	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0392016_28	PHROG	phrog_24267	NA	unknown function
UHGV-0392016_28	eggNOG-mapper	553973.CLOHYLEM_06931	tail collar domain protein	NA
UHGV-0392016_28	COG	COG4675	Phage tail collar domain	NA
UHGV-0392016_28	Structural annotation	PF10651	NA	NA
UHGV-0392016_29	PHROG	phrog_33625	holin	lysis
UHGV-0392016_29	UniRef90	UniRef90_A0A6N3AF02	Bacteriophage holin	NA
UHGV-0392016_29	eggNOG-mapper	1196031.ALEG01000039_gene1391	Bacteriophage holin	NA
UHGV-0392016_29	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0392016_29	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0392016_29	COG	COG5546	NA	NA
UHGV-0392016_29	Structural annotation	COG5546	NA	NA
UHGV-0392016_31	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0392016_31	PHROG	phrog_3088	amidase	lysis
UHGV-0392016_31	UniRef90	UniRef90_UPI001079B0A7	SH3 domain-containing protein	NA
UHGV-0392016_31	eggNOG-mapper	1232446.BAIE02000094_gene1162	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-0392016_31	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0392016_31	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0392016_31	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0392016_31	Structural annotation	PF01510, PF18342, MF_04111, NF008758, NF040670, COG5632	NA	NA
UHGV-0392016_33	UniRef90	UniRef90_G9QZ89	HTH cro/C1-type domain-containing protein	NA
UHGV-0392016_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0392016_33	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0392016_34	AcrCatalog	cluster_37488	NA	NA
UHGV-0392016_35	KOfam	K14059	int; integrase	NA
UHGV-0392016_35	PHROG	phrog_1	integrase	integration and excision
UHGV-0392016_35	UniRef90	UniRef90_UPI000E46F6FE	site-specific integrase	NA
UHGV-0392016_35	eggNOG-mapper	1232446.BAIE02000002_gene793	Phage integrase family	NA
UHGV-0392016_35	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0392016_35	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0392016_35	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0392016_35	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-0392016_38	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0392016_38	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0392016_38	UniRef90	UniRef90_UPI001D0853D7	LexA family transcriptional regulator	NA
UHGV-0392016_38	eggNOG-mapper	428127.EUBDOL_02138	Peptidase S24-like	NA
UHGV-0392016_38	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0392016_38	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0392016_38	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0392016_38	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0392016_38	Structural annotation	PF00717, PF12844, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-0392016_39	UniRef90	UniRef90_UPI000E4A43B6	transcriptional regulator	NA
UHGV-0392016_39	eggNOG-mapper	883112.HMPREF9707_01486	TRANSCRIPTIONal	NA
UHGV-0392016_39	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0392016_39	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0392016_42	PHROG	phrog_2113	NA	unknown function
UHGV-0392016_43	UniRef90	UniRef90_A0A7U9GQY0	HTH_17 domain-containing protein	NA
UHGV-0392016_43	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0392016_43	COG	COG2452	Predicted site-specific integrase-resolvase	NA
UHGV-0392016_44	PHROG	phrog_4707	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0392016_44	eggNOG-mapper	1122172.KB890259_gene1441	NA	NA
UHGV-0392016_44	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0392016_44	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0392016_44	Structural annotation	PF04492, MF_01819, NF040939, COG3355	NA	NA
UHGV-0392016_45	Structural annotation	PF11417	NA	NA
UHGV-0392016_48	PHROG	phrog_14970	NA	unknown function
UHGV-0392016_48	UniRef90	UniRef90_A0A1C5NV07	DNA damage response protein A	NA
UHGV-0392016_48	eggNOG-mapper	428127.EUBDOL_01248	double-strand break repair protein	NA
UHGV-0392016_48	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-0392016_48	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0392016_48	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0392016_49	PHROG	phrog_10477	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0392016_50	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0392016_50	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0392016_50	UniRef90	UniRef90_A0A3E3EF61	Single-stranded DNA-binding protein	NA
UHGV-0392016_50	eggNOG-mapper	428126.CLOSPI_02450	COG COG0629 Single-stranded DNA-binding protein	NA
UHGV-0392016_50	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0392016_50	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0392016_50	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0392016_50	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0392016_50	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0392016_51	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0392016_51	eggNOG-mapper	428127.EUBDOL_01246	NA	NA
UHGV-0392016_51	Structural annotation	PF05772	NA	NA
UHGV-0392016_52	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0392016_52	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0392016_52	UniRef90	UniRef90_U3PDU0	Putative Holliday junction resolvase	NA
UHGV-0392016_52	eggNOG-mapper	1399942.U3PDU0_9CAUD	magnesium ion binding	NA
UHGV-0392016_52	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0392016_52	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0392016_53	PHROG	phrog_7566	NA	unknown function
UHGV-0392016_53	eggNOG-mapper	1304866.K413DRAFT_1198	NA	NA
UHGV-0392016_54	PHROG	phrog_22292	NA	unknown function
UHGV-0392016_54	eggNOG-mapper	1232446.BAIE02000041_gene2433	NA	NA
UHGV-0392016_55	eggNOG-mapper	1035196.HMPREF9998_01745	NA	NA
UHGV-0392016_56	PHROG	phrog_419	NA	unknown function
UHGV-0392016_56	UniRef90	UniRef90_A0A3F3A3T2	Gp9	NA
UHGV-0392016_56	eggNOG-mapper	1277892.M1IRA5_9CAUD	NA	NA
UHGV-0392016_56	Structural annotation	PF14083	NA	NA
UHGV-0392016_57	PHROG	phrog_30930	NA	unknown function
UHGV-0392016_57	UniRef90	UniRef90_D2BQD3	NA	NA
UHGV-0392016_57	eggNOG-mapper	1214184.ALKY01000039_gene933	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0392016	Yes	35,195 bps	33.53%	100.00%	0.9738
UHGV-0389173	No	34,406 bps	33.83%	100.00%	0.9739
UHGV-0120785	No	20,541 bps	35.53%	58.91%	0.9811
UHGV-1465082	No	20,541 bps	35.53%	58.91%	0.9792
UHGV-1691950	No	14,348 bps	35.37%	41.14%	0.9821