vOTU-007013

Overview

No. of genomes 39

Genome length 52,864 bps

Completeness 100.00% (complete)

Host CAG-41 sp900066215

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-007013
Number of genomes	39
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00102 › vSUBFAM-00821 › vGENUS-01198 › vSUBGEN-19553 › vOTU-007013
Host taxonomy	Bacteria › Firmicutes A › Clostridia › UBA1381 › UBA1381 › CAG-41 › CAG-41 sp900066215
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1367701
BioSample	SAMEA2784515
Genome length	52,864 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	62
CDS density	94.34%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1367701_1	PHROG	phrog_10089	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UHGV-1367701_1	UniRef90	UniRef90_A0A3D0X8D0	Helicase ATP-binding domain-containing protein (Fragment)	NA
UHGV-1367701_1	eggNOG-mapper	397288.C806_03713	helicase C-terminal domain protein	NA
UHGV-1367701_1	Pfam	PF18819	Phage MuF-C-terminal domain	MuF_C
UHGV-1367701_1	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-1367701_1	Pfam	PF18857	Large polyvalent protein associated domain 38	LPD38
UHGV-1367701_1	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-1367701_3	KOfam	K21471	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	NA
UHGV-1367701_3	PHROG	phrog_329	minor tail protein	tail
UHGV-1367701_3	UniRef90	UniRef90_A0A355JE00	Peptidase C51 domain-containing protein	NA
UHGV-1367701_3	eggNOG-mapper	748727.CLJU_c01500	NLP P60 protein	NA
UHGV-1367701_3	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-1367701_3	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-1367701_3	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-1367701_4	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1367701_4	PHROG	phrog_435	endolysin	lysis
UHGV-1367701_4	UniRef90	UniRef90_A0A1C5N460	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1367701_4	eggNOG-mapper	272563.CD630_09720	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1367701_4	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1367701_4	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1367701_4	Structural annotation	PF01520, PF18342, MF_00417, TIGR02883, COG0860, COG4991	NA	NA
UHGV-1367701_5	eggNOG-mapper	397290.C810_05225	NA	NA
UHGV-1367701_6	PHROG	phrog_37799	NA	unknown function
UHGV-1367701_6	UniRef90	UniRef90_R6NA79	Toxin secretion/phage lysis holin	NA
UHGV-1367701_6	eggNOG-mapper	272563.CD630_06610	Bacteriophage holin family	NA
UHGV-1367701_6	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1367701_6	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1367701_6	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1367701_6	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1367701_7	PHROG	phrog_5073	tail fiber protein	tail
UHGV-1367701_7	eggNOG-mapper	1536769.P40081_01140	NA	NA
UHGV-1367701_7	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1367701_8	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-1367701_8	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-1367701_10	UniRef90	UniRef90_R6MQV2	Tail Collar domain protein	NA
UHGV-1367701_10	Structural annotation	PF01696, NF000420, COG3420	NA	NA
UHGV-1367701_12	Structural annotation	PF09144, NF038393	NA	NA
UHGV-1367701_15	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-1367701_15	eggNOG-mapper	1449126.JQKL01000002_gene1688	NA	NA
UHGV-1367701_16	Structural annotation	PF20387	NA	NA
UHGV-1367701_18	PHROG	phrog_14242	major head protein	head and packaging
UHGV-1367701_18	UniRef90	UniRef90_A0A355JD53	Phage major capsid protein	NA
UHGV-1367701_18	eggNOG-mapper	588581.Cpap_1528	NA	NA
UHGV-1367701_18	NCBIFam	NF033394.1	phage major capsid protein	NA
UHGV-1367701_18	Structural annotation	PF17236, MF_04133, NF033394, COG4653	NA	NA
UHGV-1367701_20	PHROG	phrog_156	portal protein	head and packaging
UHGV-1367701_20	eggNOG-mapper	588581.Cpap_1526	NA	NA
UHGV-1367701_20	Structural annotation	PF16510, MF_04120, TIGR01538, COG4383	NA	NA
UHGV-1367701_22	UniRef90	UniRef90_A0A7X6VKT0	C2H2-type domain-containing protein	NA
UHGV-1367701_22	Structural annotation	PF21169	NA	NA
UHGV-1367701_23	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1367701_23	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-1367701_23	UniRef90	UniRef90_A0A355JD48	Terminase_3 domain-containing protein	NA
UHGV-1367701_23	eggNOG-mapper	1232449.BAHV02000016_gene1824	NA	NA
UHGV-1367701_23	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1367701_23	COG	COG1783	Phage terminase large subunit	NA
UHGV-1367701_23	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1367701_24	eggNOG-mapper	1449126.JQKL01000046_gene2071	NA	NA
UHGV-1367701_24	Structural annotation	PF06056, COG2963	NA	NA
UHGV-1367701_26	UniRef90	UniRef90_A0A1Q9JGI6	RHH_1 domain-containing protein	NA
UHGV-1367701_26	eggNOG-mapper	1095750.HMPREF9970_2261	NA	NA
UHGV-1367701_26	Structural annotation	PF03869, NF041793, COG4691	NA	NA
UHGV-1367701_28	Structural annotation	PF02796, COG2771	NA	NA
UHGV-1367701_30	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-1367701_30	UniRef90	UniRef90_A0A373Q857	YopX domain-containing protein	NA
UHGV-1367701_30	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-1367701_31	eggNOG-mapper	1235802.C823_04654	NA	NA
UHGV-1367701_32	eggNOG-mapper	1235793.C809_02213	NA	NA
UHGV-1367701_32	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-1367701_33	PHROG	phrog_6802	NA	unknown function
UHGV-1367701_33	eggNOG-mapper	1256908.HMPREF0373_03028	NA	NA
UHGV-1367701_34	PHROG	phrog_419	NA	unknown function
UHGV-1367701_34	UniRef90	UniRef90_A0A060QMU0	NA	NA
UHGV-1367701_34	eggNOG-mapper	1123312.KB904569_gene346	NA	NA
UHGV-1367701_34	Structural annotation	PF14083	NA	NA
UHGV-1367701_35	KOfam	K19779	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	NA
UHGV-1367701_35	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-1367701_35	UniRef90	UniRef90_A0A1C5STJ7	MazG domain-containing protein	NA
UHGV-1367701_35	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-1367701_35	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-1367701_35	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-1367701_35	Structural annotation	PF14354, COG3478	NA	NA
UHGV-1367701_39	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1367701_39	eggNOG-mapper	536233.CLO_1822	NA	NA
UHGV-1367701_39	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-1367701_40	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-1367701_40	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1367701_40	UniRef90	UniRef90_UPI00137AD09D	NA	NA
UHGV-1367701_40	eggNOG-mapper	445971.ANASTE_00700	NA	NA
UHGV-1367701_40	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-1367701_40	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-1367701_40	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-1367701_40	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1367701_40	Structural annotation	PF14297, PF07261, TIGR01446, COG3935	NA	NA
UHGV-1367701_41	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1367701_41	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1367701_41	UniRef90	UniRef90_R6M3F2	Single-stranded DNA-binding protein	NA
UHGV-1367701_41	eggNOG-mapper	588581.Cpap_1479	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1367701_41	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1367701_41	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1367701_41	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1367701_41	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1367701_41	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1367701_43	PHROG	phrog_398	NA	unknown function
UHGV-1367701_43	UniRef90	UniRef90_UPI00137A6F13	putative HNHc nuclease	NA
UHGV-1367701_43	eggNOG-mapper	1485543.JMME01000021_gene802	Putative HNHc nuclease	NA
UHGV-1367701_43	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-1367701_43	Structural annotation	PF16784	NA	NA
UHGV-1367701_44	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-1367701_44	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-1367701_44	UniRef90	UniRef90_A0A7X8XIL0	MBL fold metallo-hydrolase	NA
UHGV-1367701_44	eggNOG-mapper	665956.HMPREF1032_03101	May be involved in the transport of PQQ or its precursor to the periplasm	NA
UHGV-1367701_44	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-1367701_44	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-1367701_44	Structural annotation	PF12706, MF_01818, TIGR03307, COG1234	NA	NA
UHGV-1367701_45	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-1367701_45	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1367701_45	UniRef90	UniRef90_UPI001D034282	recombinase RecT	NA
UHGV-1367701_45	eggNOG-mapper	1095750.HMPREF9970_1675	RecT family	NA
UHGV-1367701_45	Pfam	PF03837	RecT family	RecT
UHGV-1367701_45	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-1367701_45	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1367701_45	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-1367701_46	PHROG	phrog_674	NA	unknown function
UHGV-1367701_46	UniRef90	UniRef90_A0A7X5HYD7	NA	NA
UHGV-1367701_46	eggNOG-mapper	1408437.JNJN01000039_gene373	NA	NA
UHGV-1367701_46	Pfam	PF07083	NA	DUF1351
UHGV-1367701_46	Structural annotation	PF07083	NA	NA
UHGV-1367701_47	Structural annotation	PF09943	NA	NA
UHGV-1367701_48	PHROG	phrog_1029	NA	unknown function
UHGV-1367701_48	eggNOG-mapper	1078085.HMPREF1210_01165	NA	NA
UHGV-1367701_48	Structural annotation	PF10065, COG5532	NA	NA
UHGV-1367701_49	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-1367701_49	UniRef90	UniRef90_R6MCS9	NA	NA
UHGV-1367701_49	eggNOG-mapper	1519439.JPJG01000059_gene1910	NA	NA
UHGV-1367701_51	Structural annotation	PF10922	NA	NA
UHGV-1367701_54	PHROG	phrog_3150	NA	unknown function
UHGV-1367701_54	eggNOG-mapper	580331.Thit_1411	NA	NA
UHGV-1367701_56	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1367701_56	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1367701_56	UniRef90	UniRef90_A0A542AKC5	DNA-binding XRE family transcriptional regulator	NA
UHGV-1367701_56	eggNOG-mapper	218284.CCDN010000001_gene1646	Helix-turn-helix XRE-family like proteins	NA
UHGV-1367701_56	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-1367701_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1367701_56	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1367701_56	Structural annotation	PF01381, MF_00535, NF041951, COG1396	NA	NA
UHGV-1367701_57	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1367701_57	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1367701_57	UniRef90	UniRef90_R6MT43	DNA-binding helix-turn-helix protein	NA
UHGV-1367701_57	eggNOG-mapper	411460.RUMTOR_02056	Bacteriophage CI repressor helix-turn-helix domain	NA
UHGV-1367701_57	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-1367701_57	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1367701_57	COG	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	NA
UHGV-1367701_57	Structural annotation	PF12844, MF_00584, NF041951, COG1476	NA	NA
UHGV-1367701_58	PHROG	phrog_87	metallo-protease	other
UHGV-1367701_58	UniRef90	UniRef90_R6NN10	Peptidase_M78 domain-containing protein	NA
UHGV-1367701_58	eggNOG-mapper	536232.CLM_2576	IrrE N-terminal-like domain	NA
UHGV-1367701_58	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-1367701_58	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-1367701_58	Structural annotation	PF06114, COG2856	NA	NA
UHGV-1367701_60	eggNOG-mapper	1120998.AUFC01000015_gene1569	competence protein COMEC	NA
UHGV-1367701_60	COG	COG2333	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	NA
UHGV-1367701_62	KOfam	K14059	int; integrase	NA
UHGV-1367701_62	PHROG	phrog_1	integrase	integration and excision
UHGV-1367701_62	UniRef90	UniRef90_R6MY37	Putative integrase	NA
UHGV-1367701_62	eggNOG-mapper	1203606.HMPREF1526_00215	Phage integrase family	NA
UHGV-1367701_62	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1367701_62	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1367701_62	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1367701_62	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1367701	Yes	52,864 bps	37.34%	100.00%	0.9756
UHGV-0082528	No	52,864 bps	37.34%	100.00%	0.9749
UHGV-0204248	No	52,844 bps	37.35%	100.00%	0.9748
UHGV-1532027	No	69,201 bps	36.96%	99.90%	0.9673
UHGV-1543920	No	57,663 bps	37.04%	99.90%	0.9717
UHGV-1445735	No	28,261 bps	38.49%	52.67%	0.9681
UHGV-0094622	No	28,178 bps	38.51%	52.52%	0.9670
UHGV-1554287	No	28,040 bps	37.50%	52.31%	0.9696
UHGV-1482504	No	27,886 bps	38.67%	51.97%	0.9762
UHGV-0104788	No	25,866 bps	39.24%	48.21%	0.9777
UHGV-1597745	No	24,663 bps	39.17%	45.98%	0.9742
UHGV-0190757	No	23,994 bps	39.24%	44.73%	0.9758
UHGV-0072172	No	23,891 bps	38.40%	44.54%	0.9762
UHGV-1575425	No	23,891 bps	38.40%	44.54%	0.9762
UHGV-0265573	No	23,601 bps	38.68%	43.97%	0.9784
UHGV-1694434	No	23,344 bps	39.25%	43.51%	0.9762
UHGV-2031784	No	23,076 bps	39.40%	43.02%	0.9746
UHGV-1893267	No	22,689 bps	39.15%	42.30%	0.9764
UHGV-1883347	No	22,656 bps	39.11%	42.24%	0.9769
UHGV-0103593	No	21,526 bps	39.55%	40.11%	0.9763
UHGV-1573952	No	21,526 bps	39.55%	40.11%	0.9763
UHGV-0420899	No	21,165 bps	39.36%	39.44%	0.9748
UHGV-1575238	No	19,543 bps	39.00%	36.42%	0.9769
UHGV-1562197	No	19,397 bps	36.63%	36.19%	0.9758
UHGV-0171579	No	18,497 bps	38.85%	34.45%	0.9778
UHGV-0123235	No	17,926 bps	39.28%	33.41%	0.9747
UHGV-0326376	No	17,449 bps	36.48%	32.57%	0.9599
UHGV-1773820	No	15,254 bps	39.83%	28.43%	0.9652
UHGV-0240070	No	15,154 bps	35.32%	28.26%	0.9591
UHGV-1774914	No	15,125 bps	38.14%	28.20%	0.9739
UHGV-0082177	No	15,007 bps	36.07%	27.97%	0.9664
UHGV-0382436	No	14,372 bps	39.64%	26.78%	0.9702
UHGV-1714437	No	13,920 bps	39.89%	25.94%	0.9673
UHGV-1767308	No	13,597 bps	39.90%	25.34%	0.9706
UHGV-1838464	No	13,586 bps	38.87%	25.33%	0.9738
UHGV-1647707	No	13,448 bps	39.94%	25.07%	0.9721
UHGV-1616329	No	12,326 bps	35.91%	22.98%	0.9712
UHGV-1667887	No	11,155 bps	40.61%	20.79%	0.9706
UHGV-1974245	No	10,341 bps	38.95%	19.27%	0.9609