vOTU-007101

Overview

vOTU representative UHGV-0152009

No. of genomes 13

Genome length 41,203 bps

Completeness 100.00% (complete)

Host CAG-170 sp000432135

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-007101
Number of genomes	13
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00020 › vGENUS-00411 › vSUBGEN-33577 › vOTU-007101
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-170 › CAG-170 sp000432135
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0152009
BioSample	SAMN06110238
Genome length	41,203 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	73
CDS density	94.39%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0152009_1	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0152009_1	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0152009_1	UniRef90	UniRef90_A0A810Q1T1	HTH cro/C1-type domain-containing protein	NA
UHGV-0152009_1	eggNOG-mapper	46256.BBIK01000005_gene1058	PFAM helix-turn-helix domain protein	NA
UHGV-0152009_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0152009_1	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0152009_1	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0152009_3	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0152009_3	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0152009_3	UniRef90	UniRef90_A0A810PZI0	HTH cro/C1-type domain-containing protein	NA
UHGV-0152009_3	eggNOG-mapper	1461580.CCAS010000066_gene3994	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0152009_3	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0152009_3	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0152009_3	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0152009_4	eggNOG-mapper	1235835.C814_03153	NA	NA
UHGV-0152009_4	Structural annotation	PF09035, NF040990	NA	NA
UHGV-0152009_8	Structural annotation	PF14634	NA	NA
UHGV-0152009_10	PHROG	phrog_4433	NA	unknown function
UHGV-0152009_10	eggNOG-mapper	394503.Ccel_3068	regulation of DNA-templated transcription, elongation	NA
UHGV-0152009_10	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0152009_10	Structural annotation	NF007410	NA	NA
UHGV-0152009_11	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0152009_11	UniRef90	UniRef90_A0A2Z4QBI4	AAA domain protein	NA
UHGV-0152009_11	eggNOG-mapper	445972.ANACOL_00146	AAA domain	NA
UHGV-0152009_11	Pfam	PF13479	AAA domain	AAA_24
UHGV-0152009_11	COG	COG1100	GTPase SAR1 family domain	NA
UHGV-0152009_11	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0152009_12	UniRef90	UniRef90_A0A2Z4QA33	PD-(D/E)XK nuclease	NA
UHGV-0152009_12	eggNOG-mapper	718252.FP2_01050	NA	NA
UHGV-0152009_12	Structural annotation	PF10926, MF_03030, TIGR04328, COG4343	NA	NA
UHGV-0152009_13	PHROG	phrog_378	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0152009_13	UniRef90	UniRef90_UPI001E43F9BA	NA	NA
UHGV-0152009_13	eggNOG-mapper	1423732.BALS01000134_gene393	NA	NA
UHGV-0152009_13	Structural annotation	PF05037, NF004948	NA	NA
UHGV-0152009_14	PHROG	phrog_5810	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0152009_14	UniRef90	UniRef90_UPI00164D8A5B	replisome organizer	NA
UHGV-0152009_14	eggNOG-mapper	742740.HMPREF9474_03117	NA	NA
UHGV-0152009_14	Structural annotation	PF01475, NF006999, COG0735	NA	NA
UHGV-0152009_15	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0152009_15	UniRef90	UniRef90_A0A1Q6JI14	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0152009_15	eggNOG-mapper	1410628.JNKS01000054_gene544	NA	NA
UHGV-0152009_15	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0152009_15	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0152009_15	Structural annotation	PF01507, MF_01161, NF006327, COG0175	NA	NA
UHGV-0152009_16	PHROG	phrog_3136	NA	unknown function
UHGV-0152009_16	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-0152009_16	eggNOG-mapper	1007096.BAGW01000031_gene120	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0152009_16	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0152009_16	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0152009_17	PHROG	phrog_38832	NA	unknown function
UHGV-0152009_17	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-0152009_17	Structural annotation	PF11717, TIGR02450	NA	NA
UHGV-0152009_18	PHROG	phrog_38832	NA	unknown function
UHGV-0152009_18	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-0152009_18	Structural annotation	PF11717, TIGR02450	NA	NA
UHGV-0152009_22	PHROG	phrog_22543	NA	unknown function
UHGV-0152009_22	UniRef90	UniRef90_A0A8D9PDT5	Hydrogenase/urease nickel incorporation protein	NA
UHGV-0152009_24	UniRef90	UniRef90_A0A1C6DFA0	FAD-dependent thymidylate synthase	NA
UHGV-0152009_24	eggNOG-mapper	397290.C810_01371	NA	NA
UHGV-0152009_24	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-0152009_24	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0152009_25	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0152009_25	eggNOG-mapper	536233.CLO_1822	NA	NA
UHGV-0152009_25	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-0152009_28	PHROG	phrog_801	endolysin; inhibits RNA polymerase	lysis
UHGV-0152009_28	UniRef90	UniRef90_A0A316M891	NA	NA
UHGV-0152009_28	eggNOG-mapper	1366055.S5MLS6_9CAUD	Cytidine and deoxycytidylate deaminase zinc-binding region	NA
UHGV-0152009_28	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0152009_28	Structural annotation	PF18909	NA	NA
UHGV-0152009_29	eggNOG-mapper	742738.HMPREF9460_02503	NA	NA
UHGV-0152009_29	Structural annotation	PF06530, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-0152009_30	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-0152009_30	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0152009_30	UniRef90	UniRef90_UPI001782D995	DNA modification methylase	NA
UHGV-0152009_30	eggNOG-mapper	1423758.BN55_01455	DNA methylase	NA
UHGV-0152009_30	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0152009_30	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0152009_30	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0152009_30	COG	COG0863	DNA modification methylase	NA
UHGV-0152009_30	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0152009_32	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0152009_32	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0152009_32	UniRef90	UniRef90_A0A2U1BEH4	PBSX family phage terminase large subunit	NA
UHGV-0152009_32	eggNOG-mapper	1123511.KB905868_gene187	Phage terminase large subunit	NA
UHGV-0152009_32	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0152009_32	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0152009_32	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0152009_32	COG	COG1783	Phage terminase large subunit	NA
UHGV-0152009_32	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0152009_33	PHROG	phrog_533	portal protein	head and packaging
UHGV-0152009_33	UniRef90	UniRef90_UPI0006C81717	phage portal protein	NA
UHGV-0152009_33	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-0152009_33	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0152009_33	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0152009_34	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0152009_34	UniRef90	UniRef90_A0A1C5N7V1	Phage minor capsid protein 2	NA
UHGV-0152009_34	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-0152009_34	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0152009_34	COG	COG2369	NA	NA
UHGV-0152009_34	Structural annotation	PF06152	NA	NA
UHGV-0152009_35	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0152009_35	eggNOG-mapper	1226322.HMPREF1545_00049	NA	NA
UHGV-0152009_35	AcrCatalog	cluster_74817	NA	NA
UHGV-0152009_36	PHROG	phrog_10	major head protein	head and packaging
UHGV-0152009_36	UniRef90	UniRef90_A0A2U1BEF2	HK97 family phage major capsid protein	NA
UHGV-0152009_36	eggNOG-mapper	1226322.HMPREF1545_00050	Phage capsid family	NA
UHGV-0152009_36	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0152009_36	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0152009_36	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0152009_36	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0152009_37	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0152009_37	eggNOG-mapper	642492.Clole_0822	NA	NA
UHGV-0152009_38	PHROG	phrog_3366	NA	unknown function
UHGV-0152009_38	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-0152009_38	Pfam	PF20536	NA	DUF6751
UHGV-0152009_38	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0152009_39	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0152009_39	UniRef90	UniRef90_UPI00195E1497	minor capsid protein	NA
UHGV-0152009_39	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-0152009_39	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0152009_39	Structural annotation	PF11114	NA	NA
UHGV-0152009_40	PHROG	phrog_3266	tail completion	connector
UHGV-0152009_40	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-0152009_40	Structural annotation	PF12691	NA	NA
UHGV-0152009_41	PHROG	phrog_3099	NA	unknown function
UHGV-0152009_41	eggNOG-mapper	1235797.C816_04186	NA	NA
UHGV-0152009_41	Structural annotation	TIGR02126	NA	NA
UHGV-0152009_42	PHROG	phrog_11299	NA	unknown function
UHGV-0152009_42	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-0152009_42	Structural annotation	PF10666	NA	NA
UHGV-0152009_43	PHROG	phrog_706	NA	unknown function
UHGV-0152009_43	UniRef90	UniRef90_A0A2U1BEN4	Bacteriophage Gp15 protein	NA
UHGV-0152009_43	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-0152009_43	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0152009_43	Structural annotation	PF06854	NA	NA
UHGV-0152009_44	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0152009_44	UniRef90	UniRef90_A0A810PX76	Phage tail tape measure protein	NA
UHGV-0152009_44	eggNOG-mapper	1235797.C816_04182	SLT domain	NA
UHGV-0152009_44	COG	COG1511	NA	NA
UHGV-0152009_45	PHROG	phrog_1194	NA	unknown function
UHGV-0152009_45	eggNOG-mapper	411902.CLOBOL_00125	NA	NA
UHGV-0152009_45	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0152009_46	PHROG	phrog_13879	NA	unknown function
UHGV-0152009_46	eggNOG-mapper	1226322.HMPREF1545_00061	NA	NA
UHGV-0152009_46	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-0152009_47	Structural annotation	PF10651, NF038186	NA	NA
UHGV-0152009_48	PHROG	phrog_31538	NA	unknown function
UHGV-0152009_49	PHROG	phrog_13589	NA	unknown function
UHGV-0152009_49	eggNOG-mapper	428125.CLOLEP_01434	NA	NA
UHGV-0152009_50	PHROG	phrog_37900	NA	unknown function
UHGV-0152009_50	UniRef90	UniRef90_R5IRZ6	NA	NA
UHGV-0152009_50	eggNOG-mapper	1519439.JPJG01000060_gene1894	NA	NA
UHGV-0152009_50	Pfam	PF19789	NA	DUF6273
UHGV-0152009_50	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0152009_50	Structural annotation	PF19789, PF13620, NF033708	NA	NA
UHGV-0152009_51	PHROG	phrog_18725	NA	unknown function
UHGV-0152009_51	eggNOG-mapper	693746.OBV_18220	NA	NA
UHGV-0152009_52	Pfam	PF07484	Phage Tail Collar Domain	Collar
UHGV-0152009_52	Structural annotation	PF20055, MF_03008, NF010730, COG3940	NA	NA
UHGV-0152009_53	Pfam	PF07484	Phage Tail Collar Domain	Collar
UHGV-0152009_53	Structural annotation	PF07484	NA	NA
UHGV-0152009_54	eggNOG-mapper	1232443.BAIA02000106_gene3111	NA	NA
UHGV-0152009_56	PHROG	phrog_13256	NA	unknown function
UHGV-0152009_56	eggNOG-mapper	1226322.HMPREF1545_00166	NA	NA
UHGV-0152009_57	UniRef90	UniRef90_UPI00164EA432	SH3 domain-containing protein	NA
UHGV-0152009_57	eggNOG-mapper	525254.HMPREF0072_1273	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0152009_57	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0152009_57	Structural annotation	NF033743	NA	NA
UHGV-0152009_58	UniRef90	UniRef90_A0A1C6JAI6	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-0152009_58	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-0152009_59	PHROG	phrog_3754	NA	unknown function
UHGV-0152009_59	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0152009_60	PHROG	phrog_21718	NA	unknown function
UHGV-0152009_60	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0152009_61	PHROG	phrog_22984	NA	unknown function
UHGV-0152009_62	PHROG	phrog_16490	NA	unknown function
UHGV-0152009_62	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0152009_63	PHROG	phrog_20016	NA	unknown function
UHGV-0152009_63	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0152009_63	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0152009_63	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0152009_64	Structural annotation	PF12510	NA	NA
UHGV-0152009_65	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0152009_66	KOfam	K14059	int; integrase	NA
UHGV-0152009_66	PHROG	phrog_1	integrase	integration and excision
UHGV-0152009_66	UniRef90	UniRef90_A0A810Q0Y2	Tyr recombinase domain-containing protein	NA
UHGV-0152009_66	eggNOG-mapper	693746.OBV_43340	Belongs to the 'phage' integrase family	NA
UHGV-0152009_66	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0152009_66	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0152009_66	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-0152009_67	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0152009_67	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0152009_67	Structural annotation	PF12844	NA	NA
UHGV-0152009_69	PHROG	phrog_5319	outer membrane protein	other
UHGV-0152009_69	eggNOG-mapper	1158601.I585_00731	NA	NA
UHGV-0152009_69	Pfam	PF12773	Double zinc ribbon	DZR
UHGV-0152009_69	Structural annotation	PF03843, MF_01959, TIGR00752, NF041910, COG3390	NA	NA
UHGV-0152009_73	Structural annotation	PF13601, TIGR04176, COG1846	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0152009	Yes	41,203 bps	53.06%	100.00%	0.9830
UHGV-0195656	No	40,731 bps	53.66%	100.00%	0.9831
UHGV-1384310	No	41,285 bps	53.09%	98.15%	0.9821
UHGV-0165468	No	41,122 bps	53.72%	97.79%	0.9832
UHGV-0329739	No	39,601 bps	53.32%	93.98%	0.9829
UHGV-0067815	No	37,411 bps	53.62%	88.47%	0.9833
UHGV-1433507	No	37,411 bps	53.62%	88.47%	0.9833
UHGV-1382812	No	35,990 bps	52.80%	85.36%	0.9822
UHGV-1502898	No	35,177 bps	53.95%	83.05%	0.9834
UHGV-1377774	No	23,321 bps	53.35%	55.07%	0.9828
UHGV-1466386	No	21,202 bps	53.16%	50.17%	0.9832
UHGV-1560081	No	11,267 bps	54.74%	26.88%	0.9813
UHGV-1756024	No	10,731 bps	52.22%	26.58%	0.9820