vOTU-007358

Overview

vOTU representative UHGV-1441955

No. of genomes 41

Genome length 18,888 bps

Completeness 100.00% (complete)

Host Gemmiger qucibialis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-007358
Number of genomes	41
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-01731 › vGENUS-02198 › vSUBGEN-01111 › vOTU-007358
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Gemmiger › Gemmiger qucibialis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1441955
BioSample	NA
Genome length	18,888 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	25
CDS density	87.22%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1441955_1	Structural annotation	PF17548	NA	NA
UHGV-1441955_11	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1441955_11	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA
UHGV-1441955_12	KOfam	K06412	spoVG; stage V sporulation protein G	NA
UHGV-1441955_12	UniRef90	UniRef90_A0A1V5S9H8	Putative septation protein SpoVG	NA
UHGV-1441955_12	eggNOG-mapper	1089553.Tph_c07250	Could be involved in septation	NA
UHGV-1441955_12	Pfam	PF04026	SpoVG	SpoVG
UHGV-1441955_12	COG	COG2088	DNA-binding protein SpoVG, cell septation regulator	NA
UHGV-1441955_12	Structural annotation	PF04026, MF_00819, NF009749, COG2088	NA	NA
UHGV-1441955_13	Pfam	PF06715	Gp5 C-terminal repeat (3 copies)	Gp5_C
UHGV-1441955_13	Structural annotation	PF12708, NF007517, COG3420	NA	NA
UHGV-1441955_14	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1441955_14	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-1441955_15	PHROG	phrog_2038	upper collar connector	connector
UHGV-1441955_15	eggNOG-mapper	338473.A6XAD7_9CAUD	Phage Connector (GP10)	NA
UHGV-1441955_15	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1441955_15	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-1441955_16	PHROG	phrog_2248	tail protein	tail
UHGV-1441955_16	UniRef90	UniRef90_A0A843HU95	Caud_tail_N domain-containing protein	NA
UHGV-1441955_16	eggNOG-mapper	1309583.M4W9Q4_9CAUD	NA	NA
UHGV-1441955_16	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1441955_16	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1441955_16	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1441955_17	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-1441955_17	PHROG	phrog_14988	peptidase	other
UHGV-1441955_17	UniRef90	UniRef90_A0A4Q0U6L7	Peptidase_M23 domain-containing protein (Fragment)	NA
UHGV-1441955_17	eggNOG-mapper	1321778.HMPREF1982_01258	G5	NA
UHGV-1441955_17	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-1441955_17	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-1441955_18	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1441955_18	UniRef90	UniRef90_A0A843HQR2	Ig-like domain-containing protein	NA
UHGV-1441955_18	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-1441955_18	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1441955_22	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-1441955_22	PHROG	phrog_3578	metallo-endopeptidase	other
UHGV-1441955_22	UniRef90	UniRef90_A0A348SZW4	Peptidase_M23 domain-containing protein	NA
UHGV-1441955_22	eggNOG-mapper	293614.A1C_05580	COG0739 Membrane proteins related to metalloendopeptidases	NA
UHGV-1441955_22	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-1441955_22	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-1441955_22	Structural annotation	PF01551, NF040883	NA	NA
UHGV-1441955_23	PHROG	phrog_199	holin	lysis
UHGV-1441955_23	UniRef90	UniRef90_A0A843HL15	Phage holin family protein	NA
UHGV-1441955_23	eggNOG-mapper	877414.ATWA01000062_gene1614	Bacteriophage holin family	NA
UHGV-1441955_23	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1441955_23	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1441955_23	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1441955_24	PHROG	phrog_2150	terminase	head and packaging
UHGV-1441955_24	UniRef90	UniRef90_A0A355RJE0	DNA encapsidation protein	NA
UHGV-1441955_24	eggNOG-mapper	10753.B7SSN7_BPNF	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1441955_24	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1441955_24	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1441955	Yes	18,888 bps	37.68%	100.00%	0.9770
UHGV-0060217	No	18,834 bps	37.68%	100.00%	0.9788
UHGV-1479838	No	18,464 bps	37.88%	100.00%	0.9754
UHGV-1998700	No	18,386 bps	37.83%	100.00%	0.9755
UHGV-0253809	No	18,795 bps	38.44%	86.88%	0.9789
UHGV-1240687	No	18,632 bps	37.79%	84.57%	0.9781
UHGV-0059195	No	18,282 bps	37.91%	84.52%	0.9756
UHGV-1480520	No	18,282 bps	37.91%	84.52%	0.9756
UHGV-1161106	No	18,557 bps	37.83%	84.23%	0.9789
UHGV-1213872	No	18,541 bps	37.85%	84.16%	0.9780
UHGV-1223446	No	18,535 bps	37.85%	84.13%	0.9781
UHGV-1204584	No	18,533 bps	37.85%	84.12%	0.9783
UHGV-0151749	No	18,077 bps	38.25%	83.65%	0.9780
UHGV-0076845	No	18,014 bps	37.82%	82.49%	0.9754
UHGV-1392478	No	17,993 bps	37.81%	82.39%	0.9754
UHGV-0187523	No	17,972 bps	37.80%	82.30%	0.9754
UHGV-0042218	No	17,394 bps	38.12%	79.60%	0.9778
UHGV-1442747	No	17,394 bps	38.12%	79.60%	0.9778
UHGV-0088512	No	16,538 bps	38.03%	76.48%	0.9791
UHGV-1487217	No	16,538 bps	38.03%	76.48%	0.9791
UHGV-1502043	No	15,944 bps	38.42%	73.78%	0.9805
UHGV-0085092	No	19,752 bps	37.86%	61.48%	0.9780
UHGV-1488984	No	19,534 bps	37.87%	60.80%	0.9784
UHGV-1397898	No	19,193 bps	38.26%	59.74%	0.9789
UHGV-0047473	No	19,109 bps	38.25%	59.47%	0.9790
UHGV-1398566	No	19,109 bps	38.25%	59.47%	0.9790
UHGV-1396397	No	19,081 bps	38.23%	59.39%	0.9730
UHGV-0163830	No	19,038 bps	37.70%	59.25%	0.9779
UHGV-0244676	No	19,038 bps	37.70%	59.25%	0.9779
UHGV-0172597	No	19,021 bps	37.74%	59.20%	0.9772
UHGV-1438553	No	18,725 bps	38.14%	58.28%	0.9781
UHGV-0058964	No	18,602 bps	38.19%	57.89%	0.9796
UHGV-0370401	No	18,553 bps	38.23%	57.74%	0.9789
UHGV-1438040	No	18,906 bps	38.20%	54.31%	0.9766
UHGV-0143103	No	18,790 bps	38.15%	53.98%	0.9769
UHGV-1440438	No	18,790 bps	38.15%	53.98%	0.9769
UHGV-0192903	No	18,729 bps	38.20%	53.80%	0.9764
UHGV-2206363	No	13,169 bps	38.97%	45.97%	0.9799
UHGV-0063266	No	12,116 bps	39.56%	42.29%	0.9810
UHGV-0161290	No	10,953 bps	39.41%	38.36%	0.9804
UHGV-0255562	No	10,898 bps	39.33%	38.04%	0.9793