vOTU-007564

Overview

No. of genomes 34

Genome length 13,826 bps

Completeness 99.90% (high-quality)

Host UBA1394 sp900538575

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-007564
Number of genomes	34
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00012 › vSUBFAM-01052 › vGENUS-00976 › vSUBGEN-00469 › vOTU-007564
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › UBA1394 › UBA1394 sp900538575
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1495979
BioSample	SAMEA3664507
Genome length	13,826 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	18
CDS density	94.15%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1495979_3	KOfam	K07273	acm; lysozyme	NA
UHGV-1495979_3	PHROG	phrog_6745	endolysin	lysis
UHGV-1495979_3	UniRef90	UniRef90_A0A1C6ACC3	Lysozyme M1	NA
UHGV-1495979_3	eggNOG-mapper	1304880.JAGB01000002_gene2202	Glycosyl hydrolase, family 25	NA
UHGV-1495979_3	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1495979_3	Pfam	PF01476	LysM domain	LysM
UHGV-1495979_3	COG	COG1388	LysM repeat	NA
UHGV-1495979_3	Structural annotation	PF01183, PF11623, COG3757, COG2139	NA	NA
UHGV-1495979_4	Pfam	PF01402	Ribbon-helix-helix protein, copG family	RHH_1
UHGV-1495979_6	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1495979_6	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1495979_6	UniRef90	UniRef90_A0A843GHP1	DNA-directed DNA polymerase	NA
UHGV-1495979_6	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1495979_6	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA
UHGV-1495979_7	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1495979_7	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1495979_7	UniRef90	UniRef90_UPI000F8179D7	single-stranded DNA-binding protein	NA
UHGV-1495979_7	eggNOG-mapper	226185.EF_0499	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1495979_7	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1495979_7	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1495979_7	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1495979_7	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1495979_7	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1495979_8	PHROG	phrog_2150	terminase	head and packaging
UHGV-1495979_8	UniRef90	UniRef90_A0A843GFY2	Phage DNA encapsidation protein	NA
UHGV-1495979_8	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1495979_8	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1495979_9	PHROG	phrog_199	holin	lysis
UHGV-1495979_9	UniRef90	UniRef90_A0A843HL15	Phage holin family protein	NA
UHGV-1495979_9	eggNOG-mapper	1437610.BREU_1264	Bacteriophage holin family	NA
UHGV-1495979_9	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1495979_9	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1495979_9	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1495979_11	Structural annotation	PF21703, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1495979_12	Structural annotation	PF20934	NA	NA
UHGV-1495979_13	PHROG	phrog_2038	upper collar connector	connector
UHGV-1495979_13	UniRef90	UniRef90_A0A2Z4GUB7	Upper collar protein	NA
UHGV-1495979_13	eggNOG-mapper	1128071.G9J3I3_9CAUD	Phage Connector (GP10)	NA
UHGV-1495979_13	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1495979_13	Structural annotation	PF05352, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-1495979_15	Structural annotation	PF06977, MF_03029, NF035926, COG3204	NA	NA
UHGV-1495979_18	eggNOG-mapper	1485543.JMME01000023_gene2454	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1495979	Yes	13,826 bps	35.66%	99.90%	0.9788
UHGV-1497163	No	13,637 bps	35.73%	99.94%	0.9741
UHGV-1342920	No	14,022 bps	35.57%	99.90%	0.9777
UHGV-0381885	No	14,019 bps	35.85%	99.90%	0.9742
UHGV-0341979	No	13,993 bps	36.28%	99.90%	0.9758
UHGV-1449582	No	13,958 bps	35.91%	99.90%	0.9746
UHGV-0421279	No	13,927 bps	35.62%	99.90%	0.9777
UHGV-0202390	No	13,830 bps	35.86%	99.90%	0.9746
UHGV-1376847	No	13,740 bps	35.76%	99.90%	0.9748
UHGV-2166659	No	13,740 bps	35.82%	99.90%	0.9765
UHGV-0264284	No	13,712 bps	35.74%	99.90%	0.9755
UHGV-1381290	No	13,710 bps	35.85%	99.90%	0.9746
UHGV-1381291	No	13,698 bps	35.71%	99.90%	0.9740
UHGV-0385807	No	13,691 bps	35.67%	99.90%	0.9773
UHGV-1497173	No	13,653 bps	35.73%	99.90%	0.9748
UHGV-0099484	No	13,561 bps	35.70%	99.90%	0.9766
UHGV-1382602	No	13,558 bps	35.71%	99.90%	0.9761
UHGV-0123942	No	13,606 bps	36.02%	99.77%	0.9761
UHGV-1495091	No	13,606 bps	36.02%	99.77%	0.9761
UHGV-1912573	No	13,558 bps	35.35%	99.37%	0.9765
UHGV-1494586	No	13,556 bps	35.78%	99.35%	0.9748
UHGV-0165062	No	13,464 bps	35.75%	98.68%	0.9778
UHGV-1966092	No	13,445 bps	35.96%	98.54%	0.9764
UHGV-1995854	No	13,434 bps	35.86%	98.45%	0.9771
UHGV-1402208	No	13,400 bps	35.89%	98.26%	0.9774
UHGV-1381830	No	12,035 bps	35.97%	88.20%	0.9763
UHGV-1418974	No	10,174 bps	36.91%	74.59%	0.9785
UHGV-0787379	No	10,038 bps	36.69%	73.61%	0.9774
UHGV-0887507	No	9,959 bps	36.16%	73.02%	0.9781
UHGV-1435833	No	9,304 bps	36.84%	68.08%	0.9794
UHGV-1427803	No	9,230 bps	36.71%	67.54%	0.9798
UHGV-1422889	No	9,205 bps	37.05%	67.47%	0.9778
UHGV-1489959	No	8,830 bps	37.13%	64.70%	0.9755
UHGV-1380179	No	7,510 bps	37.24%	55.04%	0.9777