vOTU-007727

Overview

No. of genomes 17

Genome length 13,647 bps

Completeness 99.91% (high-quality)

Host Clostridium Q symbiosum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-007727
Number of genomes	17
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00012 › vSUBFAM-00191 › vGENUS-02093 › vSUBGEN-01580 › vOTU-007727
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Clostridium Q › Clostridium Q symbiosum
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0384034
BioSample	NA
Genome length	13,647 bps
CheckV completeness	99.91% (high-quality)
CheckV contamination	0.00%
CDS count	21
CDS density	92.81%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0384034_1	Structural annotation	PF08931	NA	NA
UHGV-0384034_4	PHROG	phrog_2038	upper collar connector	connector
UHGV-0384034_4	UniRef90	UniRef90_A0A2Z4GUB7	Upper collar protein	NA
UHGV-0384034_4	eggNOG-mapper	10753.B7SSN1_BPNF	Phage Connector (GP10)	NA
UHGV-0384034_4	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0384034_4	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-0384034_5	PHROG	phrog_11037	NA	unknown function
UHGV-0384034_5	UniRef90	UniRef90_A0A843HJD0	Phage_lysozyme2 domain-containing protein	NA
UHGV-0384034_5	eggNOG-mapper	1449050.JNLE01000003_gene2104	Putative peptidoglycan binding domain	NA
UHGV-0384034_5	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0384034_5	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0384034_5	Structural annotation	PF18013	NA	NA
UHGV-0384034_6	Structural annotation	PF20934	NA	NA
UHGV-0384034_7	Structural annotation	PF21703, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0384034_9	COG	COG1388	LysM repeat	NA
UHGV-0384034_9	Structural annotation	PF05382, TIGR02594, COG4322	NA	NA
UHGV-0384034_11	PHROG	phrog_2150	terminase	head and packaging
UHGV-0384034_11	UniRef90	UniRef90_A0A843GFY2	Phage DNA encapsidation protein	NA
UHGV-0384034_11	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0384034_11	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0384034_13	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0384034_13	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0384034_13	UniRef90	UniRef90_A0A1H5WWA4	Single-stranded DNA-binding protein	NA
UHGV-0384034_13	eggNOG-mapper	1282887.AUJG01000016_gene1170	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0384034_13	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0384034_13	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0384034_13	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0384034_13	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0384034_13	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0384034_14	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-0384034_14	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0384034_14	UniRef90	UniRef90_A0A843GHP1	DNA-directed DNA polymerase	NA
UHGV-0384034_14	eggNOG-mapper	1162304.I3PV12_9CAUD	nucleotide binding	NA
UHGV-0384034_14	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0384034_14	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0384034	Yes	13,647 bps	41.06%	99.91%	0.9811
UHGV-0382971	No	14,146 bps	40.69%	99.90%	0.9812
UHGV-0388606	No	14,057 bps	40.80%	99.90%	0.9814
UHGV-0450237	No	13,992 bps	40.43%	99.90%	0.9812
UHGV-0054960	No	13,906 bps	40.75%	99.90%	0.9808
UHGV-1446949	No	13,906 bps	40.75%	99.90%	0.9808
UHGV-0256631	No	13,892 bps	40.74%	99.90%	0.9809
UHGV-1363735	No	13,133 bps	40.81%	99.90%	0.9812
UHGV-1494040	No	13,625 bps	41.05%	99.76%	0.9808
UHGV-1401913	No	13,436 bps	40.91%	98.37%	0.9811
UHGV-0386590	No	13,160 bps	40.99%	96.34%	0.9817
UHGV-0392852	No	13,156 bps	40.92%	96.32%	0.9817
UHGV-0063841	No	13,061 bps	40.82%	95.62%	0.9812
UHGV-0065528	No	11,017 bps	41.54%	80.67%	0.9809
UHGV-1423017	No	11,017 bps	41.54%	80.67%	0.9809
UHGV-1419231	No	10,057 bps	41.57%	73.59%	0.9799
UHGV-1459269	No	9,751 bps	41.15%	71.31%	0.9818