vOTU-008709

Overview

vOTU representative UHGV-0192757

No. of genomes 9

Genome length 38,498 bps

Completeness 99.90% (high-quality)

Host Romboutsia timonensis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-008709
Number of genomes	9
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 › vSUBFAM-02314 › vGENUS-02750 › vSUBGEN-20830 › vOTU-008709
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Peptostreptococcales › Peptostreptococcaceae › Romboutsia › Romboutsia timonensis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0192757
BioSample	SAMN00792008
Genome length	38,498 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	53
CDS density	83.81%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0192757_1	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0192757_1	UniRef90	UniRef90_A0A2P1S5Y5	HNHc domain-containing protein	NA
UHGV-0192757_1	eggNOG-mapper	536233.CLO_1358	NA	NA
UHGV-0192757_2	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0192757_2	UniRef90	UniRef90_A0A1C5YDW7	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-0192757_3	PHROG	phrog_824	NA	unknown function
UHGV-0192757_3	UniRef90	UniRef90_UPI000B821158	VRR-NUC domain-containing protein	NA
UHGV-0192757_3	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-0192757_3	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0192757_3	Structural annotation	PF08774	NA	NA
UHGV-0192757_6	PHROG	phrog_2329	NA	unknown function
UHGV-0192757_6	eggNOG-mapper	1292035.H476_0264	NA	NA
UHGV-0192757_6	Pfam	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
UHGV-0192757_7	PHROG	phrog_6775	NA	unknown function
UHGV-0192757_10	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0192757_10	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0192757_10	UniRef90	UniRef90_UPI00189AF047	single-stranded DNA-binding protein	NA
UHGV-0192757_10	eggNOG-mapper	445973.CLOBAR_00026	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0192757_10	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0192757_10	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0192757_10	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0192757_10	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0192757_10	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0192757_12	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-0192757_12	UniRef90	UniRef90_UPI001C0F3BD0	Bro-N domain-containing protein	NA
UHGV-0192757_12	eggNOG-mapper	573061.Clocel_3583	BRO family, N-terminal domain	NA
UHGV-0192757_12	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0192757_12	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0192757_12	COG	COG3617	Prophage antirepressor	NA
UHGV-0192757_12	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-0192757_13	Pfam	PF09388	Spo0E like sporulation regulatory protein	SpoOE-like
UHGV-0192757_15	PHROG	phrog_1974	NA	unknown function
UHGV-0192757_15	UniRef90	UniRef90_UPI001C114AB8	nucleoid-associated protein	NA
UHGV-0192757_15	eggNOG-mapper	1292035.H476_1947	NA	NA
UHGV-0192757_15	Pfam	PF04245	37-kD nucleoid-associated bacterial protein	NA37
UHGV-0192757_15	COG	COG3081	dsDNA-binding nucleoid-associated protein YejK/NdpA	NA
UHGV-0192757_15	Structural annotation	PF04245, MF_00730, NF001557, COG3081	NA	NA
UHGV-0192757_18	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0192757_18	UniRef90	UniRef90_A0A4P8IFK4	NA	NA
UHGV-0192757_18	eggNOG-mapper	999413.HMPREF1094_02028	NA	NA
UHGV-0192757_18	Structural annotation	PF21578	NA	NA
UHGV-0192757_20	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0192757_20	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0192757_20	UniRef90	UniRef90_UPI0005E377B6	helix-turn-helix transcriptional regulator	NA
UHGV-0192757_20	eggNOG-mapper	1292035.H476_3453	Helix-turn-helix XRE-family like proteins	NA
UHGV-0192757_20	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0192757_20	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0192757_20	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-0192757_22	eggNOG-mapper	500633.CLOHIR_00350	Conserved phage C-terminus (Phg_2220_C)	NA
UHGV-0192757_23	PHROG	phrog_3180	Arc-like repressor	transcription regulation
UHGV-0192757_23	UniRef90	UniRef90_UPI001D0EAE74	ribbon-helix-helix domain-containing protein	NA
UHGV-0192757_23	eggNOG-mapper	748449.Halha_1699	Ribbon-helix-helix domain	NA
UHGV-0192757_23	Pfam	PF12651	Ribbon-helix-helix domain	RHH_3
UHGV-0192757_23	COG	COG0864	Metal-responsive transcriptional regulator, contains CopG/Arc/MetJ DNA-binding domain	NA
UHGV-0192757_24	PHROG	phrog_4223	NA	unknown function
UHGV-0192757_24	AcrCatalog	cluster_2615	NA	NA
UHGV-0192757_25	KOfam	K18640	parM, stbA; plasmid segregation protein ParM	NA
UHGV-0192757_25	PHROG	phrog_691	partition protein	DNA, RNA and nucleotide metabolism
UHGV-0192757_25	UniRef90	UniRef90_A0A1C5VEM7	ALP_N domain-containing protein	NA
UHGV-0192757_25	Pfam	PF17989	Actin like proteins N terminal domain	ALP_N
UHGV-0192757_25	Pfam	PF21522	Archaeal actin homologue MreB-like, C-terminal	MreB-like_C
UHGV-0192757_25	Structural annotation	PF06723, MF_02207, NF010498, COG1077	NA	NA
UHGV-0192757_28	UniRef90	UniRef90_UPI000F045DE6	NA	NA
UHGV-0192757_29	PHROG	phrog_2329	NA	unknown function
UHGV-0192757_29	UniRef90	UniRef90_UPI0018AB79C1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA
UHGV-0192757_29	Structural annotation	PF04014, NF007312, COG2336	NA	NA
UHGV-0192757_30	PHROG	phrog_9829	NA	unknown function
UHGV-0192757_32	Structural annotation	PF08005, PF19972	NA	NA
UHGV-0192757_34	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0192757_34	PHROG	phrog_435	endolysin	lysis
UHGV-0192757_34	UniRef90	UniRef90_A0A6L5Y0L2	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0192757_34	eggNOG-mapper	1408823.AXUS01000024_gene2741	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0192757_34	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0192757_34	Pfam	PF05036	SPOR domain	SPOR
UHGV-0192757_34	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0192757_34	Structural annotation	PF01520, PF05036, MF_02022, MF_00562, TIGR02883, COG0860, COG3147	NA	NA
UHGV-0192757_36	PHROG	phrog_13589	NA	unknown function
UHGV-0192757_36	eggNOG-mapper	768710.DesyoDRAFT_1133	tail collar domain protein	NA
UHGV-0192757_36	COG	COG4675	Phage tail collar domain	NA
UHGV-0192757_37	PHROG	phrog_16573	NA	unknown function
UHGV-0192757_37	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0192757_37	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0192757_38	PHROG	phrog_7043	tail protein	tail
UHGV-0192757_38	UniRef90	UniRef90_UPI00189703DD	phage tail protein	NA
UHGV-0192757_38	eggNOG-mapper	1292035.H476_1004	Prophage endopeptidase tail	NA
UHGV-0192757_38	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0192757_38	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0192757_38	COG	COG4926	Phage-related protein	NA
UHGV-0192757_38	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0192757_39	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0192757_39	UniRef90	UniRef90_UPI0018CF8817	phage tail family protein	NA
UHGV-0192757_39	eggNOG-mapper	1567011.A0A0A7RWN1_9VIRU	Phage tail protein	NA
UHGV-0192757_39	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0192757_39	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0192757_39	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0192757_40	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0192757_40	UniRef90	UniRef90_UPI00164B6290	phage tail tape measure protein	NA
UHGV-0192757_40	eggNOG-mapper	536233.CLO_1370	phage tail tape measure protein	NA
UHGV-0192757_40	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0192757_40	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0192757_40	COG	COG5283	Phage-related tail protein	NA
UHGV-0192757_40	Structural annotation	TIGR01760	NA	NA
UHGV-0192757_41	PHROG	phrog_1271	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0192757_41	UniRef90	UniRef90_A0A373JAG1	HNHc domain-containing protein	NA
UHGV-0192757_41	eggNOG-mapper	315730.BcerKBAB4_3417	regulation of methylation-dependent chromatin silencing	NA
UHGV-0192757_41	Pfam	PF06467	MYM-type Zinc finger with FCS sequence motif	zf-FCS
UHGV-0192757_41	Pfam	PF13391	HNH endonuclease	HNH_2
UHGV-0192757_41	COG	COG3440	Predicted restriction endonuclease	NA
UHGV-0192757_41	Structural annotation	PF05766	NA	NA
UHGV-0192757_42	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0192757_42	UniRef90	UniRef90_UPI001CA5A43B	phage tail tape measure protein	NA
UHGV-0192757_42	eggNOG-mapper	864178.E2ELJ5_9CAUD	peptidoglycan catabolic process	NA
UHGV-0192757_42	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0192757_42	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0192757_43	KOfam	K22804	SMC6; structural maintenance of chromosomes protein 6	NA
UHGV-0192757_43	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0192757_43	eggNOG-mapper	1033737.CAEV01000029_gene286	phage tail tape measure protein	NA
UHGV-0192757_43	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0192757_43	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0192757_44	eggNOG-mapper	632245.CLP_2688	NA	NA
UHGV-0192757_44	Structural annotation	PF11836	NA	NA
UHGV-0192757_45	PHROG	phrog_88	major tail protein	tail
UHGV-0192757_45	UniRef90	UniRef90_A0A6M1WMM9	Phage tail protein	NA
UHGV-0192757_45	eggNOG-mapper	1111121.HMPREF1247_0016	phage major tail protein, phi13 family	NA
UHGV-0192757_45	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0192757_45	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0192757_46	PHROG	phrog_78	tail terminator	connector
UHGV-0192757_46	eggNOG-mapper	536233.CLO_1367	NA	NA
UHGV-0192757_46	Structural annotation	PF05657	NA	NA
UHGV-0192757_47	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0192757_47	eggNOG-mapper	632245.CLP_2691	NA	NA
UHGV-0192757_47	Structural annotation	TIGR01725	NA	NA
UHGV-0192757_48	UniRef90	UniRef90_UPI000A176131	phage head closure protein	NA
UHGV-0192757_48	eggNOG-mapper	632245.CLP_2692	Phage head-tail joining protein	NA
UHGV-0192757_48	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0192757_48	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0192757_49	UniRef90	UniRef90_UPI00164B66EB	head-tail connector protein	NA
UHGV-0192757_49	eggNOG-mapper	632245.CLP_2693	Phage gp6-like head-tail connector protein	NA
UHGV-0192757_49	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0192757_49	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0192757_50	KOfam	K06904	NA	NA
UHGV-0192757_50	PHROG	phrog_10	major head protein	head and packaging
UHGV-0192757_50	UniRef90	UniRef90_UPI00164A4138	phage major capsid protein	NA
UHGV-0192757_50	eggNOG-mapper	545697.HMPREF0216_01743	Phage prohead protease, HK97 family	NA
UHGV-0192757_50	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0192757_50	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0192757_50	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0192757_50	COG	COG3740	Phage head maturation protease	NA
UHGV-0192757_51	PHROG	phrog_12	portal protein	head and packaging
UHGV-0192757_51	UniRef90	UniRef90_R7Z8G8	Phage portal protein	NA
UHGV-0192757_51	eggNOG-mapper	1285586.H131_21312	Portal protein	NA
UHGV-0192757_51	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0192757_51	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0192757_51	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0192757_51	Structural annotation	PF04860, PF08184, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0192757_52	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0192757_52	UniRef90	UniRef90_K6DIF2	Phage terminase large subunit	NA
UHGV-0192757_52	eggNOG-mapper	1196031.ALEG01000039_gene1812	Terminase	NA
UHGV-0192757_52	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0192757_52	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0192757_52	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0192757_52	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0192757_53	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0192757_53	UniRef90	UniRef90_A0A1W1X5Z0	Phage terminase, small subunit, putative, P27 family	NA
UHGV-0192757_53	eggNOG-mapper	1196031.ALEG01000039_gene1811	Phage terminase, small subunit	NA
UHGV-0192757_53	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0192757_53	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0192757_53	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0192757_53	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0192757	Yes	38,498 bps	27.48%	99.90%	0.9637
UHGV-1346485	No	38,589 bps	27.49%	99.90%	0.9552
UHGV-0127368	No	38,533 bps	27.52%	99.90%	0.9551
UHGV-1438101	No	38,533 bps	27.52%	99.90%	0.9603
UHGV-0080112	No	31,338 bps	28.43%	82.87%	0.9768
UHGV-1388458	No	31,338 bps	28.43%	82.87%	0.9768
UHGV-0352867	No	18,265 bps	28.45%	48.10%	0.9780
UHGV-0310245	No	13,598 bps	28.99%	36.47%	0.9773
UHGV-1617790	No	10,419 bps	29.00%	27.94%	0.9702