vOTU-008739

Overview

vOTU representative UHGV-0204152

No. of genomes 6

Genome length 41,871 bps

Completeness 91.83% (high-quality)

Host Acidaminococcus intestini

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-008739
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00011 › vGENUS-15983 › vSUBGEN-28338 › vOTU-008739
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Acidaminococcales › Acidaminococcaceae › Acidaminococcus › Acidaminococcus intestini
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204152
BioSample	SAMN00142107
Genome length	41,871 bps
CheckV completeness	91.83% (high-quality)
CheckV contamination	0.00%
CDS count	52
CDS density	90.81%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204152_3	UniRef90	UniRef90_A0A3A5R8G5	XRE family transcriptional regulator	NA
UHGV-0204152_3	eggNOG-mapper	698758.AXY_14010	NA	NA
UHGV-0204152_3	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0204152_4	eggNOG-mapper	693746.OBV_41830	NA	NA
UHGV-0204152_5	PHROG	phrog_13787	NA	unknown function
UHGV-0204152_5	UniRef90	UniRef90_A0A3A5R8S9	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-0204152_5	eggNOG-mapper	591001.Acfer_1137	DNA-templated transcription, initiation	NA
UHGV-0204152_5	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-0204152_5	Structural annotation	PF13412, MF_00959, NF006146, COG1191	NA	NA
UHGV-0204152_6	PHROG	phrog_408	NA	unknown function
UHGV-0204152_6	UniRef90	UniRef90_A0A3A5RNV3	rRNA biogenesis protein rrp5	NA
UHGV-0204152_6	eggNOG-mapper	568816.Acin_2001	NA	NA
UHGV-0204152_7	PHROG	phrog_69	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0204152_7	UniRef90	UniRef90_A0A3A5R9F4	NA	NA
UHGV-0204152_7	eggNOG-mapper	591001.Acfer_1095	NA	NA
UHGV-0204152_7	Pfam	PF10926	NA	DUF2800
UHGV-0204152_7	COG	COG2887	RecB family exonuclease	NA
UHGV-0204152_7	Structural annotation	PF10926, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-0204152_8	PHROG	phrog_112	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0204152_8	UniRef90	UniRef90_A0A3A5RII3	NA	NA
UHGV-0204152_8	eggNOG-mapper	568816.Acin_1363	NA	NA
UHGV-0204152_8	Pfam	PF10991	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
UHGV-0204152_8	Structural annotation	PF10991, MF_04153	NA	NA
UHGV-0204152_10	KOfam	K02334	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	NA
UHGV-0204152_10	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0204152_10	UniRef90	UniRef90_A0A3A5RES4	POLAc domain-containing protein	NA
UHGV-0204152_10	eggNOG-mapper	568816.Acin_1997	DNA polymerase	NA
UHGV-0204152_10	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0204152_10	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-0204152_10	Structural annotation	PF00476, MF_04101, NF011540, COG0749	NA	NA
UHGV-0204152_11	PHROG	phrog_21057	NA	unknown function
UHGV-0204152_11	eggNOG-mapper	591001.Acfer_1091	NA	NA
UHGV-0204152_11	Structural annotation	PF13451	NA	NA
UHGV-0204152_12	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0204152_12	UniRef90	UniRef90_A0A3A5R8I7	NA	NA
UHGV-0204152_12	eggNOG-mapper	591001.Acfer_1090	NA	NA
UHGV-0204152_12	Pfam	PF14359	NA	DUF4406
UHGV-0204152_12	Structural annotation	PF14359, MF_03036, TIGR03646, COG3613	NA	NA
UHGV-0204152_13	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-0204152_13	PHROG	phrog_1883	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0204152_13	UniRef90	UniRef90_A0A3A5R8K7	DNA primase	NA
UHGV-0204152_13	eggNOG-mapper	568816.Acin_1993	D5 N terminal like	NA
UHGV-0204152_13	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0204152_13	Pfam	PF19263	NA	DUF5906
UHGV-0204152_13	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0204152_13	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0204152_13	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0204152_13	Structural annotation	PF19263, PF08706, PF03288, PF09250, MF_04000, TIGR01613, COG3378	NA	NA
UHGV-0204152_14	PHROG	phrog_93	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0204152_14	UniRef90	UniRef90_A0A3A5R8T7	VRR-NUC domain-containing protein	NA
UHGV-0204152_14	eggNOG-mapper	568816.Acin_1992	VRR_NUC	NA
UHGV-0204152_14	Structural annotation	PF08774, MF_01490, NF040854, COG1591	NA	NA
UHGV-0204152_15	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-0204152_15	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0204152_15	UniRef90	UniRef90_A0A3A5R8M7	ATP-dependent helicase	NA
UHGV-0204152_15	eggNOG-mapper	591001.Acfer_1085	SNF2 family N-terminal domain protein	NA
UHGV-0204152_15	PADLOC	ZorD1_00007	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-0204152_15	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0204152_15	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0204152_15	Structural annotation	PF13872, PF16203, MF_01821, NF041790, COG0553	NA	NA
UHGV-0204152_16	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0204152_16	UniRef90	UniRef90_A0A3A5RAN8	NA	NA
UHGV-0204152_16	eggNOG-mapper	591001.Acfer_1084	sigma factor activity	NA
UHGV-0204152_16	Pfam	PF07374	NA	DUF1492
UHGV-0204152_16	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0204152_16	Structural annotation	PF07374, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-0204152_17	eggNOG-mapper	545697.HMPREF0216_00941	NA	NA
UHGV-0204152_18	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0204152_18	PHROG	phrog_2323	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0204152_18	UniRef90	UniRef90_A0A3A5REY1	HNH endonuclease	NA
UHGV-0204152_18	eggNOG-mapper	1235793.C809_04344	HNH endonuclease	NA
UHGV-0204152_18	AcrCatalog	cluster_19695	NA	NA
UHGV-0204152_18	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0204152_18	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0204152_18	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0204152_19	COG	COG4127	Predicted restriction endonuclease, Mrr-cat superfamily	NA
UHGV-0204152_20	PHROG	phrog_2308	NA	unknown function
UHGV-0204152_20	eggNOG-mapper	568816.Acin_1985	NA	NA
UHGV-0204152_21	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0204152_21	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0204152_21	UniRef90	UniRef90_A0A3A5RKF7	Methyltransferase	NA
UHGV-0204152_21	eggNOG-mapper	568816.Acin_1352	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0204152_21	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0204152_21	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0204152_21	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0204152_21	COG	COG0863	DNA modification methylase	NA
UHGV-0204152_21	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0204152_22	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0204152_22	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0204152_22	UniRef90	UniRef90_A0A3A5R8I4	Cytosine-specific methyltransferase	NA
UHGV-0204152_22	eggNOG-mapper	568816.Acin_1351	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0204152_22	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-0204152_22	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0204152_22	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0204152_22	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0204152_22	Structural annotation	PF00145, MF_00786, TIGR00675, COG0270	NA	NA
UHGV-0204152_23	PHROG	phrog_2443	amidoligase enzyme	other
UHGV-0204152_23	UniRef90	UniRef90_UPI0019809FB6	phage terminase small subunit P27 family	NA
UHGV-0204152_23	eggNOG-mapper	568816.Acin_1350	NA	NA
UHGV-0204152_23	Structural annotation	PF12224	NA	NA
UHGV-0204152_24	PHROG	phrog_6231	NA	unknown function
UHGV-0204152_24	UniRef90	UniRef90_A0A3A5RKB8	Nmad4 domain-containing protein	NA
UHGV-0204152_24	eggNOG-mapper	1123250.KB908415_gene1428	NA	NA
UHGV-0204152_24	Pfam	PF18756	Nucleotide modification associated domain 4	Nmad4
UHGV-0204152_24	Structural annotation	PF18756	NA	NA
UHGV-0204152_25	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0204152_25	UniRef90	UniRef90_A0A3A5R8J5	Phage terminase small subunit P27 family	NA
UHGV-0204152_25	eggNOG-mapper	568816.Acin_1347	Phage terminase small subunit	NA
UHGV-0204152_25	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0204152_25	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0204152_25	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0204152_25	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0204152_26	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0204152_26	UniRef90	UniRef90_A0A3A5R8L4	Terminase large subunit	NA
UHGV-0204152_26	eggNOG-mapper	568816.Acin_1978	large subunit	NA
UHGV-0204152_26	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0204152_26	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0204152_26	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0204152_26	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0204152_27	PHROG	phrog_12	portal protein	head and packaging
UHGV-0204152_27	UniRef90	UniRef90_A0A3A5R8U6	Phage portal protein	NA
UHGV-0204152_27	eggNOG-mapper	568816.Acin_1345	Phage portal protein	NA
UHGV-0204152_27	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0204152_27	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0204152_27	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0204152_27	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0204152_28	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0204152_28	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0204152_28	UniRef90	UniRef90_A0A3A5RAP8	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0204152_28	eggNOG-mapper	568816.Acin_1975	Belongs to the peptidase S14 family	NA
UHGV-0204152_28	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0204152_28	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0204152_28	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-0204152_29	PHROG	phrog_10	major head protein	head and packaging
UHGV-0204152_29	UniRef90	UniRef90_A0A3A5RNX8	Phage major capsid protein	NA
UHGV-0204152_29	eggNOG-mapper	568816.Acin_1974	Phage capsid family	NA
UHGV-0204152_29	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0204152_29	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0204152_29	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0204152_29	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0204152_30	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0204152_30	UniRef90	UniRef90_A0A3A5R9H4	Phage gp6-like head-tail connector protein	NA
UHGV-0204152_30	eggNOG-mapper	568816.Acin_1915	Phage gp6-like head-tail connector protein	NA
UHGV-0204152_30	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0204152_30	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0204152_30	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0204152_31	PHROG	phrog_25	head closure Hc1	connector
UHGV-0204152_31	UniRef90	UniRef90_A0A3A5RIK3	Head-tail adaptor protein	NA
UHGV-0204152_31	eggNOG-mapper	568816.Acin_1914	Phage head-tail joining protein	NA
UHGV-0204152_31	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0204152_31	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0204152_31	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0204152_31	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0204152_32	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0204152_32	UniRef90	UniRef90_A0A3A5R8J3	HK97 gp10 family phage protein	NA
UHGV-0204152_32	eggNOG-mapper	568816.Acin_1913	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0204152_32	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0204152_32	COG	COG5005	NA	NA
UHGV-0204152_32	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0204152_33	PHROG	phrog_176	tail terminator	connector
UHGV-0204152_33	UniRef90	UniRef90_A0A3A5REU4	NA	NA
UHGV-0204152_33	eggNOG-mapper	1123288.SOV_2c03560	NA	NA
UHGV-0204152_33	Pfam	PF11367	NA	DUF3168
UHGV-0204152_33	Structural annotation	PF16807, COG5003	NA	NA
UHGV-0204152_34	PHROG	phrog_1407	major tail protein	tail
UHGV-0204152_34	UniRef90	UniRef90_G4Q4D5	Phage major tail protein, TP901-1 family	NA
UHGV-0204152_34	eggNOG-mapper	568816.Acin_1911	Phage tail tube protein	NA
UHGV-0204152_34	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-0204152_34	COG	COG5437	Phage tail protein, TP901-1 family	NA
UHGV-0204152_34	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0204152_35	PHROG	phrog_2115	tail protein	tail
UHGV-0204152_35	eggNOG-mapper	568816.Acin_1910	NA	NA
UHGV-0204152_35	Structural annotation	PF19591	NA	NA
UHGV-0204152_36	eggNOG-mapper	1123288.SOV_2c03530	NA	NA
UHGV-0204152_37	PHROG	phrog_12798	NA	unknown function
UHGV-0204152_37	UniRef90	UniRef90_A0A3A5R8M9	TMP_3 domain-containing protein	NA
UHGV-0204152_37	eggNOG-mapper	568816.Acin_1908	tape measure	NA
UHGV-0204152_37	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0204152_37	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0204152_37	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0204152_37	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0204152_38	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0204152_38	UniRef90	UniRef90_A0A3A5R8N1	Phage tail protein	NA
UHGV-0204152_38	eggNOG-mapper	568816.Acin_1906	Phage tail protein	NA
UHGV-0204152_38	Structural annotation	PF20753, PF19512, TIGR01633, COG4722	NA	NA
UHGV-0204152_39	eggNOG-mapper	568816.Acin_1905	NA	NA
UHGV-0204152_39	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0204152_40	eggNOG-mapper	568816.Acin_1904	NA	NA
UHGV-0204152_41	Structural annotation	PF16640, NF011805, COG5456	NA	NA
UHGV-0204152_42	PHROG	phrog_7032	tail fiber protein	tail
UHGV-0204152_42	eggNOG-mapper	568816.Acin_1902	alcohol dehydrogenase	NA
UHGV-0204152_42	COG	COG1063	Threonine dehydrogenase or related Zn-dependent dehydrogenase	NA
UHGV-0204152_42	Structural annotation	PF11962, COG5471	NA	NA
UHGV-0204152_43	KOfam	K06871	NA	NA
UHGV-0204152_43	PHROG	phrog_1802	radical SAM domain-containing protein	other
UHGV-0204152_43	UniRef90	UniRef90_A0A3A5R9I5	SPASM domain-containing protein	NA
UHGV-0204152_43	eggNOG-mapper	568816.Acin_1901	radical SAM	NA
UHGV-0204152_43	PADLOC	pVip-lone	Viperins not associated with kinases	Viperin
UHGV-0204152_43	Pfam	PF04055	Radical SAM superfamily	Radical_SAM
UHGV-0204152_43	NCBIFam	TIGR04085.1	SPASM domain-containing protein	NA
UHGV-0204152_43	COG	COG0641	Sulfatase maturation enzyme AslB, radical SAM superfamily	NA
UHGV-0204152_43	Structural annotation	PF04055, MF_00660, TIGR04136, COG0641	NA	NA
UHGV-0204152_45	Pfam	PF13403	Hint domain	Hint_2
UHGV-0204152_45	Structural annotation	PF13403, NF038136	NA	NA
UHGV-0204152_46	Structural annotation	PF02832	NA	NA
UHGV-0204152_47	KOfam	K06871	NA	NA
UHGV-0204152_47	PHROG	phrog_1802	radical SAM domain-containing protein	other
UHGV-0204152_47	UniRef90	UniRef90_A0A3A5R8L3	Radical SAM protein	NA
UHGV-0204152_47	eggNOG-mapper	568816.Acin_1896	radical SAM	NA
UHGV-0204152_47	Pfam	PF04055	Radical SAM superfamily	Radical_SAM
UHGV-0204152_47	COG	COG0641	Sulfatase maturation enzyme AslB, radical SAM superfamily	NA
UHGV-0204152_47	Structural annotation	PF04055, MF_00660, TIGR04136, COG0641	NA	NA
UHGV-0204152_48	eggNOG-mapper	1111454.HMPREF1250_0946	NA	NA
UHGV-0204152_51	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0204152_51	PHROG	phrog_435	endolysin	lysis
UHGV-0204152_51	UniRef90	UniRef90_A0A3A5RNZ9	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0204152_51	eggNOG-mapper	1064535.MELS_1119	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0204152_51	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0204152_51	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0204152_51	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204152	Yes	41,871 bps	47.70%	91.83%	0.9411
UHGV-2146994	No	61,149 bps	49.18%	99.90%	0.9131
UHGV-2052410	No	58,475 bps	46.54%	99.90%	0.9242
UHGV-2038084	No	56,921 bps	46.80%	99.90%	0.9251
UHGV-2069356	No	54,177 bps	46.93%	99.90%	0.9364
UHGV-2071046	No	41,055 bps	47.35%	89.12%	0.9214