vOTU-008938

Overview

vOTU representative UHGV-1402081

No. of genomes 25

Genome length 13,273 bps

Completeness 92.79% (high-quality)

Host ER4 sp000765235

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-008938
Number of genomes	25
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00090 › vSUBFAM-00163 › vGENUS-01689 › vSUBGEN-02998 › vOTU-008938
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › ER4 › ER4 sp000765235
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1402081
BioSample	NA
Genome length	13,273 bps
CheckV completeness	92.79% (high-quality)
CheckV contamination	0.00%
CDS count	22
CDS density	87.27%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1402081_1	KOfam	K14059	int; integrase	NA
UHGV-1402081_1	PHROG	phrog_1	integrase	integration and excision
UHGV-1402081_1	UniRef90	UniRef90_UPI001C02FB7B	site-specific integrase	NA
UHGV-1402081_1	eggNOG-mapper	877411.JMMA01000002_gene2540	Belongs to the 'phage' integrase family	NA
UHGV-1402081_1	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-1402081_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1402081_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1402081_1	Structural annotation	PF00589, PF13102, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-1402081_2	UniRef90	UniRef90_A0A3E2UJ26	XRE family transcriptional regulator	NA
UHGV-1402081_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1402081_3	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1402081_3	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-1402081_3	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-1402081_4	PHROG	phrog_2113	NA	unknown function
UHGV-1402081_4	eggNOG-mapper	1160721.RBI_II00485	NA	NA
UHGV-1402081_4	Structural annotation	PF08279, COG1654	NA	NA
UHGV-1402081_5	PHROG	phrog_5708	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1402081_5	UniRef90	UniRef90_A0A2K4QBX8	Phg_2220_C domain-containing protein	NA
UHGV-1402081_5	eggNOG-mapper	1203606.HMPREF1526_00313	DnaD domain protein	NA
UHGV-1402081_5	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1402081_5	Structural annotation	PF09681, TIGR01714	NA	NA
UHGV-1402081_6	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-1402081_6	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1402081_6	UniRef90	UniRef90_UPI00195C3322	ATP-binding protein	NA
UHGV-1402081_6	eggNOG-mapper	1121344.JHZO01000004_gene1170	NA	NA
UHGV-1402081_6	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-1402081_6	NCBIFam	NF005992.0	hypothetical protein	NA
UHGV-1402081_6	COG	COG1484	DNA replication protein DnaC	NA
UHGV-1402081_6	Structural annotation	PF01695, MF_01158, NF005992, COG1484	NA	NA
UHGV-1402081_7	KOfam	K03091	sigH; RNA polymerase sporulation-specific sigma factor	NA
UHGV-1402081_7	PHROG	phrog_351	RNA polymerase sigma factor	transcription regulation
UHGV-1402081_7	UniRef90	UniRef90_UPI001F4290AF	sigma-70 family RNA polymerase sigma factor	NA
UHGV-1402081_7	COG	COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	NA
UHGV-1402081_7	Structural annotation	PF07638, MF_00959, NF006147, COG0568	NA	NA
UHGV-1402081_8	UniRef90	UniRef90_A0A3A9TJA5	HTH_8 domain-containing protein	NA
UHGV-1402081_8	eggNOG-mapper	1009370.ALO_17461	NA	NA
UHGV-1402081_13	PHROG	phrog_11299	NA	unknown function
UHGV-1402081_13	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-1402081_13	Structural annotation	PF10666	NA	NA
UHGV-1402081_14	PHROG	phrog_706	NA	unknown function
UHGV-1402081_14	UniRef90	UniRef90_UPI001D069FB9	Gp15 family bacteriophage protein	NA
UHGV-1402081_14	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-1402081_14	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1402081_14	Structural annotation	PF06854	NA	NA
UHGV-1402081_15	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1402081_15	UniRef90	UniRef90_A0A810PX76	Phage tail tape measure protein	NA
UHGV-1402081_15	eggNOG-mapper	693746.OBV_18190	domain protein	NA
UHGV-1402081_15	COG	COG1511	NA	NA
UHGV-1402081_15	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-1402081_16	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1402081_16	UniRef90	UniRef90_A0A2U1BEM0	Minor capsid protein	NA
UHGV-1402081_16	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-1402081_16	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1402081_16	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-1402081_18	Structural annotation	NF041070	NA	NA
UHGV-1402081_21	PHROG	phrog_13890	NA	unknown function
UHGV-1402081_21	UniRef90	UniRef90_A0A417NGM5	Arc family DNA-binding protein	NA
UHGV-1402081_21	eggNOG-mapper	1378168.N510_00539	NA	NA
UHGV-1402081_22	PHROG	phrog_2158	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UHGV-1402081_22	UniRef90	UniRef90_UPI00048995ED	Abi family protein	NA
UHGV-1402081_22	eggNOG-mapper	411470.RUMGNA_03486	Abi-like protein	NA
UHGV-1402081_22	COG	COG4823	Abortive infection bacteriophage resistance protein	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1402081	Yes	13,273 bps	51.97%	92.79%	0.9722
UHGV-2204985	No	15,495 bps	50.06%	99.90%	0.9552
UHGV-0012413	No	14,461 bps	50.33%	99.90%	0.9725
UHGV-2023114	No	12,354 bps	52.57%	86.30%	0.9758
UHGV-0142574	No	12,339 bps	51.57%	86.21%	0.9744
UHGV-1499786	No	12,339 bps	51.57%	86.21%	0.9744
UHGV-1392368	No	11,912 bps	52.87%	83.32%	0.9735
UHGV-1920497	No	11,491 bps	53.08%	80.35%	0.9735
UHGV-1409274	No	11,366 bps	52.53%	79.42%	0.9758
UHGV-1956233	No	11,333 bps	53.12%	79.25%	0.9745
UHGV-1922773	No	11,292 bps	51.94%	78.90%	0.9719
UHGV-0247179	No	11,226 bps	52.73%	78.44%	0.9728
UHGV-1438319	No	10,847 bps	52.81%	75.89%	0.9755
UHGV-1443385	No	10,770 bps	53.13%	75.29%	0.9716
UHGV-0035177	No	9,782 bps	51.72%	68.37%	0.9634
UHGV-1489956	No	8,847 bps	52.76%	61.82%	0.9748
UHGV-1377350	No	8,464 bps	54.42%	59.20%	0.9788
UHGV-1378209	No	8,387 bps	52.97%	58.59%	0.9802
UHGV-1486630	No	8,317 bps	53.04%	58.13%	0.9756
UHGV-1973494	No	8,284 bps	53.39%	58.07%	0.9712
UHGV-1465208	No	8,124 bps	53.43%	56.78%	0.9771
UHGV-1463856	No	7,914 bps	54.21%	55.34%	0.9756
UHGV-0018275	No	7,724 bps	52.64%	53.95%	0.9773
UHGV-1422263	No	7,692 bps	54.51%	53.81%	0.9769
UHGV-1921941	No	7,633 bps	55.04%	53.40%	0.9773