vOTU-008994

Overview

No. of genomes 19

Genome length 41,506 bps

Completeness 99.90% (high-quality)

Host CAG-170 sp000432135

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-008994
Number of genomes	19
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00020 › vGENUS-00177 › vSUBGEN-16214 › vOTU-008994
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-170 › CAG-170 sp000432135
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1471387
BioSample	SAMEA2148374
Genome length	41,506 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	81
CDS density	93.44%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1471387_1	PHROG	phrog_4433	NA	unknown function
UHGV-1471387_1	eggNOG-mapper	106648.BBLJ01000054_gene3814	regulation of DNA-templated transcription, elongation	NA
UHGV-1471387_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1471387_8	Structural annotation	PF10548	NA	NA
UHGV-1471387_9	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-1471387_9	UniRef90	UniRef90_A0A373Q857	YopX domain-containing protein	NA
UHGV-1471387_9	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-1471387_10	eggNOG-mapper	1235835.C814_03153	NA	NA
UHGV-1471387_10	Structural annotation	PF09035, NF040990	NA	NA
UHGV-1471387_11	UniRef90	UniRef90_A0A1C7FQD9	Transcriptional regulator	NA
UHGV-1471387_11	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1471387_11	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-1471387_12	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1471387_12	UniRef90	UniRef90_UPI001E54DE4F	helix-turn-helix domain-containing protein	NA
UHGV-1471387_12	eggNOG-mapper	1378168.N510_01712	NA	NA
UHGV-1471387_12	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1471387_12	Structural annotation	PF12844, NF007257, COG3655	NA	NA
UHGV-1471387_14	eggNOG-mapper	1298920.KI911353_gene413	NA	NA
UHGV-1471387_14	Pfam	PF12773	Double zinc ribbon	DZR
UHGV-1471387_16	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1471387_16	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1471387_16	Structural annotation	PF12844	NA	NA
UHGV-1471387_17	KOfam	K14059	int; integrase	NA
UHGV-1471387_17	PHROG	phrog_1	integrase	integration and excision
UHGV-1471387_17	UniRef90	UniRef90_UPI00195CC1EE	tyrosine-type recombinase/integrase	NA
UHGV-1471387_17	eggNOG-mapper	1235835.C814_03141	Belongs to the 'phage' integrase family	NA
UHGV-1471387_17	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1471387_17	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1471387_17	Structural annotation	PF00589, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-1471387_18	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-1471387_19	Structural annotation	PF12510	NA	NA
UHGV-1471387_20	PHROG	phrog_20016	NA	unknown function
UHGV-1471387_20	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1471387_20	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-1471387_20	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1471387_21	PHROG	phrog_16490	NA	unknown function
UHGV-1471387_21	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-1471387_22	PHROG	phrog_22984	NA	unknown function
UHGV-1471387_23	PHROG	phrog_21718	NA	unknown function
UHGV-1471387_23	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-1471387_24	PHROG	phrog_3754	NA	unknown function
UHGV-1471387_24	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-1471387_25	UniRef90	UniRef90_UPI00164AED9E	helix-turn-helix domain-containing protein	NA
UHGV-1471387_25	eggNOG-mapper	1280680.AUJU01000007_gene2221	Helix-turn-helix XRE-family like proteins	NA
UHGV-1471387_25	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-1471387_25	Structural annotation	PF13560, NF040522, COG2944	NA	NA
UHGV-1471387_28	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-1471387_29	PHROG	phrog_14030	NA	unknown function
UHGV-1471387_29	UniRef90	UniRef90_R6LL81	SLH domain-containing protein	NA
UHGV-1471387_29	eggNOG-mapper	1121866.AUGK01000003_gene1444	amidase activity	NA
UHGV-1471387_29	COG	COG1705	Flagellum-specific peptidoglycan hydrolase FlgJ	NA
UHGV-1471387_30	PHROG	phrog_13256	NA	unknown function
UHGV-1471387_30	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-1471387_34	Pfam	PF07484	Phage Tail Collar Domain	Collar
UHGV-1471387_34	Structural annotation	PF07484	NA	NA
UHGV-1471387_35	Pfam	PF07484	Phage Tail Collar Domain	Collar
UHGV-1471387_35	Structural annotation	PF20055, MF_03008, NF010730, COG3940	NA	NA
UHGV-1471387_36	PHROG	phrog_18725	NA	unknown function
UHGV-1471387_36	eggNOG-mapper	693746.OBV_18220	NA	NA
UHGV-1471387_37	PHROG	phrog_13879	NA	unknown function
UHGV-1471387_37	eggNOG-mapper	1122919.KB905559_gene1344	NA	NA
UHGV-1471387_37	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-1471387_38	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1471387_39	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1471387_39	eggNOG-mapper	1123312.KB904569_gene357	Phage tail tape measure protein TP901	NA
UHGV-1471387_39	COG	COG5412	Phage-related protein	NA
UHGV-1471387_39	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-1471387_41	PHROG	phrog_18646	NA	unknown function
UHGV-1471387_41	UniRef90	UniRef90_B6CXF0	Peptidase-colicin	NA
UHGV-1471387_42	PHROG	phrog_885	major tail protein	tail
UHGV-1471387_42	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-1471387_42	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-1471387_42	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1471387_43	UniRef90	UniRef90_A0A415JI88	NA	NA
UHGV-1471387_43	Structural annotation	PF11367	NA	NA
UHGV-1471387_44	PHROG	phrog_17977	NA	unknown function
UHGV-1471387_44	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-1471387_44	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1471387_46	PHROG	phrog_544	major head protein	head and packaging
UHGV-1471387_46	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-1471387_46	eggNOG-mapper	1232453.BAIF02000011_gene3359	NA	NA
UHGV-1471387_46	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-1471387_46	Structural annotation	PF03864, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1471387_47	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1471387_47	UniRef90	UniRef90_A0A6B9SU02	Fibronectin autolysin	NA
UHGV-1471387_47	eggNOG-mapper	476272.RUMHYD_01775	COG NOG36366 non supervised orthologous group	NA
UHGV-1471387_47	Structural annotation	PF06810	NA	NA
UHGV-1471387_48	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1471387_48	UniRef90	UniRef90_UPI0018AA0B5A	HK97 gp10 family phage protein	NA
UHGV-1471387_48	eggNOG-mapper	1123309.AQYB01000018_gene814	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-1471387_48	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1471387_48	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1471387_48	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1471387_49	PHROG	phrog_115	minor head protein	head and packaging
UHGV-1471387_49	UniRef90	UniRef90_A0A810PSD3	Phage_Mu_F domain-containing protein	NA
UHGV-1471387_49	eggNOG-mapper	1504822.CCNO01000013_gene286	cell adhesion	NA
UHGV-1471387_49	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1471387_49	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-1471387_49	COG	COG2369	NA	NA
UHGV-1471387_49	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-1471387_50	PHROG	phrog_37900	NA	unknown function
UHGV-1471387_50	UniRef90	UniRef90_R5IRZ6	NA	NA
UHGV-1471387_50	eggNOG-mapper	1519439.JPJG01000060_gene1894	NA	NA
UHGV-1471387_50	Pfam	PF19789	NA	DUF6273
UHGV-1471387_50	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-1471387_50	Structural annotation	PF19789, PF13620, NF033708	NA	NA
UHGV-1471387_52	PHROG	phrog_10898	NA	unknown function
UHGV-1471387_52	Structural annotation	PF16408, NF033510	NA	NA
UHGV-1471387_53	PHROG	phrog_10898	NA	unknown function
UHGV-1471387_53	UniRef90	UniRef90_A0A7U3NJT3	Putative Ig-like domain-containing protein	NA
UHGV-1471387_53	eggNOG-mapper	717606.PaecuDRAFT_2136	S-layer homology domain	NA
UHGV-1471387_53	COG	COG1520	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	NA
UHGV-1471387_53	Structural annotation	PF19081, PF15418, MF_01905, NF032891, COG3291	NA	NA
UHGV-1471387_56	Structural annotation	PF10651, NF038186	NA	NA
UHGV-1471387_57	PHROG	phrog_64	portal protein	head and packaging
UHGV-1471387_57	UniRef90	UniRef90_UPI001AA0B7FF	phage portal protein	NA
UHGV-1471387_57	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1471387_57	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1471387_57	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1471387_58	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1471387_58	PHROG	phrog_10250	NA	unknown function
UHGV-1471387_58	UniRef90	UniRef90_UPI0018A99FCF	PBSX family phage terminase large subunit	NA
UHGV-1471387_58	eggNOG-mapper	476272.RUMHYD_01756	NA	NA
UHGV-1471387_58	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1471387_58	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-1471387_58	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1471387_58	COG	COG1783	Phage terminase large subunit	NA
UHGV-1471387_58	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1471387_59	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-1471387_59	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-1471387_59	UniRef90	UniRef90_A0A396NMY4	Terminase small subunit	NA
UHGV-1471387_59	eggNOG-mapper	476272.RUMHYD_01754	Terminase small subunit	NA
UHGV-1471387_59	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-1471387_59	COG	COG3728	Phage terminase, small subunit	NA
UHGV-1471387_59	Structural annotation	PF03592, COG3728	NA	NA
UHGV-1471387_60	Structural annotation	PF10922, MF_00839	NA	NA
UHGV-1471387_61	eggNOG-mapper	742738.HMPREF9460_02503	NA	NA
UHGV-1471387_61	Structural annotation	PF06530, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-1471387_64	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1471387_64	eggNOG-mapper	536233.CLO_1822	NA	NA
UHGV-1471387_64	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-1471387_65	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-1471387_65	eggNOG-mapper	428125.CLOLEP_01814	COG NOG14118 non supervised orthologous group	NA
UHGV-1471387_65	Structural annotation	PF12643, MF_01020, TIGR03188	NA	NA
UHGV-1471387_67	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-1471387_67	UniRef90	UniRef90_A0A7C1L2V1	Restriction alleviation protein, Lar family	NA
UHGV-1471387_67	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-1471387_67	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-1471387_67	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-1471387_67	Structural annotation	PF14354, NF007260	NA	NA
UHGV-1471387_71	PHROG	phrog_38832	NA	unknown function
UHGV-1471387_71	eggNOG-mapper	1232443.BAIA02000078_gene48	NA	NA
UHGV-1471387_72	PHROG	phrog_3136	NA	unknown function
UHGV-1471387_72	UniRef90	UniRef90_UPI001C02A61B	ASCH domain-containing protein	NA
UHGV-1471387_72	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1471387_72	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-1471387_75	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-1471387_75	PHROG	phrog_363	DNA methyltransferase	other
UHGV-1471387_75	UniRef90	UniRef90_G4KRB8	Cytosine-specific methyltransferase	NA
UHGV-1471387_75	eggNOG-mapper	693746.OBV_01900	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-1471387_75	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-1471387_75	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1471387_75	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1471387_75	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1471387_75	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-1471387_77	PHROG	phrog_16304	NA	unknown function
UHGV-1471387_77	UniRef90	UniRef90_A0A3D3Y5P0	NA	NA
UHGV-1471387_77	Pfam	PF19808	NA	DUF6291
UHGV-1471387_77	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1471387_77	Structural annotation	PF19808	NA	NA
UHGV-1471387_78	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1471387_78	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1471387_78	UniRef90	UniRef90_R6LLA3	Single-stranded DNA-binding protein	NA
UHGV-1471387_78	eggNOG-mapper	1007096.BAGW01000007_gene1922	Single-strand binding protein family	NA
UHGV-1471387_78	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1471387_78	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1471387_78	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1471387_78	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1471387_78	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1471387_79	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-1471387_79	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1471387_79	UniRef90	UniRef90_A0A1Y4W4R3	Recombinase RecT	NA
UHGV-1471387_79	eggNOG-mapper	428125.CLOLEP_01822	RecT family	NA
UHGV-1471387_79	Pfam	PF03837	RecT family	RecT
UHGV-1471387_79	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-1471387_79	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1471387_79	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-1471387_80	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1471387_80	UniRef90	UniRef90_A0A1Y4W4B5	YqaJ domain-containing protein	NA
UHGV-1471387_80	eggNOG-mapper	428125.CLOLEP_01823	YqaJ viral recombinase family	NA
UHGV-1471387_80	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-1471387_80	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-1471387_80	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-1471387_80	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-1471387_81	PHROG	phrog_27197	NA	unknown function
UHGV-1471387_81	eggNOG-mapper	573061.Clocel_3578	regulation of DNA-templated transcription, elongation	NA
UHGV-1471387_81	COG	COG5164	Transcription elongation factor SPT5	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1471387	Yes	41,506 bps	54.37%	99.90%	0.9828
UHGV-0058747	No	42,499 bps	53.98%	99.90%	0.9824
UHGV-1531162	No	42,499 bps	53.98%	99.90%	0.9824
UHGV-1470562	No	41,565 bps	54.41%	99.90%	0.9829
UHGV-0182525	No	41,539 bps	54.39%	99.90%	0.9825
UHGV-0076520	No	40,142 bps	54.26%	97.59%	0.9776
UHGV-1424562	No	35,836 bps	54.15%	87.05%	0.9828
UHGV-1420106	No	34,301 bps	54.92%	83.41%	0.9832
UHGV-1409499	No	27,466 bps	54.11%	66.79%	0.9822
UHGV-1418541	No	24,155 bps	54.84%	58.77%	0.9833
UHGV-1420066	No	22,886 bps	54.93%	55.69%	0.9832
UHGV-1561856	No	19,659 bps	54.42%	47.75%	0.9834
UHGV-1731148	No	17,907 bps	53.01%	43.02%	0.9808
UHGV-2001520	No	13,439 bps	54.68%	32.52%	0.9830
UHGV-1698943	No	12,859 bps	52.42%	30.99%	0.9788
UHGV-1780728	No	12,600 bps	54.28%	30.44%	0.9829
UHGV-2003923	No	11,366 bps	55.01%	27.63%	0.9828
UHGV-2226515	No	10,659 bps	54.38%	25.90%	0.9831
UHGV-1545696	No	10,266 bps	55.18%	24.81%	0.9823