vOTU-009135

Overview

No. of genomes 15

Genome length 40,037 bps

Completeness 98.55% (high-quality)

Host Longicatena caecimuris

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-009135
Number of genomes	15
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-04774 › vGENUS-08913 › vSUBGEN-09651 › vOTU-009135
Host taxonomy	Bacteria › Firmicutes › Bacilli › Erysipelotrichales › Erysipelotrichaceae › Longicatena › Longicatena caecimuris
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1500702
BioSample	SAMEA3136668
Genome length	40,037 bps
CheckV completeness	98.55% (high-quality)
CheckV contamination	0.00%
CDS count	55
CDS density	92.71%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1500702_1	KOfam	K00662	aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]	NA
UHGV-1500702_1	PHROG	phrog_22826	NA	unknown function
UHGV-1500702_1	UniRef90	UniRef90_A0A1C6CF42	Aminoglycoside N(3)-acetyltransferase	NA
UHGV-1500702_1	eggNOG-mapper	552396.HMPREF0863_02683	Aminoglycoside 3-N-acetyltransferase	NA
UHGV-1500702_1	Pfam	PF02522	Aminoglycoside 3-N-acetyltransferase	Antibiotic_NAT
UHGV-1500702_1	COG	COG2746	Aminoglycoside N3'-acetyltransferase	NA
UHGV-1500702_2	UniRef90	UniRef90_G1VXN8	Thioredoxin-like_fold domain-containing protein	NA
UHGV-1500702_2	eggNOG-mapper	908340.HMPREF9406_2554	NA	NA
UHGV-1500702_3	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1500702_3	PHROG	phrog_435	endolysin	lysis
UHGV-1500702_3	UniRef90	UniRef90_UPI001BD160C7	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1500702_3	eggNOG-mapper	552396.HMPREF0863_00263	hmm pf01520	NA
UHGV-1500702_3	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1500702_3	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1500702_3	Structural annotation	PF01520, PF05036, MF_02022, MF_00562, TIGR02883, COG0860, COG3147	NA	NA
UHGV-1500702_4	UniRef90	UniRef90_A0A4R4FF68	CTP synthase	NA
UHGV-1500702_4	eggNOG-mapper	552396.HMPREF0863_01650	NA	NA
UHGV-1500702_5	PHROG	phrog_1129	holin	lysis
UHGV-1500702_5	UniRef90	UniRef90_A0A3E3DX81	Holin	NA
UHGV-1500702_5	eggNOG-mapper	552396.HMPREF0863_01649	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1500702_5	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1500702_5	Structural annotation	PF06946	NA	NA
UHGV-1500702_7	PHROG	phrog_372	tail protein	tail
UHGV-1500702_7	UniRef90	UniRef90_UPI001D001C14	NA	NA
UHGV-1500702_7	eggNOG-mapper	469596.HMPREF9488_01319	NA	NA
UHGV-1500702_7	Pfam	PF05895	NA	DUF859
UHGV-1500702_7	Structural annotation	PF05895, MF_04116, NF010681, NF012201, COG3291	NA	NA
UHGV-1500702_8	PHROG	phrog_6616	tail protein	tail
UHGV-1500702_8	eggNOG-mapper	469596.HMPREF9488_01318	NA	NA
UHGV-1500702_9	PHROG	phrog_1194	NA	unknown function
UHGV-1500702_9	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1500702_10	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1500702_10	UniRef90	UniRef90_A0A1C6JZ05	Phage-related protein	NA
UHGV-1500702_10	eggNOG-mapper	33035.JPJF01000093_gene2243	phage tail tape measure protein	NA
UHGV-1500702_10	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1500702_10	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1500702_11	PHROG	phrog_8355	NA	unknown function
UHGV-1500702_11	UniRef90	UniRef90_UPI001D0309B6	bacteriophage Gp15 family protein	NA
UHGV-1500702_11	eggNOG-mapper	86416.Clopa_0585	NA	NA
UHGV-1500702_12	PHROG	phrog_8300	NA	unknown function
UHGV-1500702_12	eggNOG-mapper	1151292.QEW_2425	NA	NA
UHGV-1500702_12	Structural annotation	PF06896	NA	NA
UHGV-1500702_13	PHROG	phrog_820	major tail protein	tail
UHGV-1500702_13	eggNOG-mapper	1282664.H354_06691	NA	NA
UHGV-1500702_13	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1500702_14	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-1500702_14	UniRef90	UniRef90_UPI001D02938E	minor capsid protein	NA
UHGV-1500702_14	eggNOG-mapper	394503.Ccel_3286	NA	NA
UHGV-1500702_14	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-1500702_14	Structural annotation	PF12691, COG5003	NA	NA
UHGV-1500702_15	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1500702_15	UniRef90	UniRef90_UPI0018E07468	minor capsid protein	NA
UHGV-1500702_15	eggNOG-mapper	1282664.H354_06681	NA	NA
UHGV-1500702_16	PHROG	phrog_8710	NA	unknown function
UHGV-1500702_16	eggNOG-mapper	1123263.AUKY01000051_gene1077	NA	NA
UHGV-1500702_16	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-1500702_17	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1500702_17	eggNOG-mapper	483218.BACPEC_01153	NA	NA
UHGV-1500702_18	PHROG	phrog_1378	NA	unknown function
UHGV-1500702_18	eggNOG-mapper	742740.HMPREF9474_03506	NA	NA
UHGV-1500702_19	PHROG	phrog_422	major head protein	head and packaging
UHGV-1500702_19	UniRef90	UniRef90_UPI001D020AEF	capsid protein	NA
UHGV-1500702_19	eggNOG-mapper	552396.HMPREF0863_01635	NA	NA
UHGV-1500702_19	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1500702_20	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-1500702_20	eggNOG-mapper	552396.HMPREF0863_01634	NA	NA
UHGV-1500702_21	PHROG	phrog_1048	NA	unknown function
UHGV-1500702_21	UniRef90	UniRef90_UPI001D02F1DD	NA	NA
UHGV-1500702_21	eggNOG-mapper	457412.RSAG_01107	NA	NA
UHGV-1500702_21	Pfam	PF11195	NA	DUF2829
UHGV-1500702_21	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-1500702_21	Structural annotation	PF11195	NA	NA
UHGV-1500702_23	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1500702_23	UniRef90	UniRef90_UPI001D0157A8	phage minor capsid protein	NA
UHGV-1500702_23	eggNOG-mapper	679192.HMPREF9013_1305	Phage minor capsid protein 2	NA
UHGV-1500702_23	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1500702_23	Structural annotation	PF06152	NA	NA
UHGV-1500702_25	PHROG	phrog_533	portal protein	head and packaging
UHGV-1500702_25	UniRef90	UniRef90_UPI001D011A41	capsid protein	NA
UHGV-1500702_25	eggNOG-mapper	552396.HMPREF0863_01629	NA	NA
UHGV-1500702_25	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1500702_26	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1500702_26	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1500702_26	UniRef90	UniRef90_UPI001D013389	terminase	NA
UHGV-1500702_26	eggNOG-mapper	552396.HMPREF0863_01628	Phage terminase, large subunit, PBSX family	NA
UHGV-1500702_26	COG	COG1783	Phage terminase large subunit	NA
UHGV-1500702_26	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1500702_27	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-1500702_27	UniRef90	UniRef90_UPI001D02F64C	DNA-packaging protein	NA
UHGV-1500702_27	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-1500702_27	Structural annotation	PF16677	NA	NA
UHGV-1500702_28	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-1500702_28	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1500702_28	Structural annotation	PF04545, MF_00674, NF009180, COG1342	NA	NA
UHGV-1500702_30	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-1500702_30	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-1500702_30	UniRef90	UniRef90_UPI001D00E0C9	DEAD/DEAH box helicase	NA
UHGV-1500702_30	eggNOG-mapper	1274524.BSONL12_06073	SNF2 family N-terminal domain	NA
UHGV-1500702_30	PADLOC	ZorD1_00007	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-1500702_30	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-1500702_30	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-1500702_30	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-1500702_30	Structural annotation	PF13872, PF16203, MF_01821, NF041790, COG0553	NA	NA
UHGV-1500702_31	PHROG	phrog_93	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1500702_31	UniRef90	UniRef90_UPI001E60DFFB	VRR-NUC domain-containing protein	NA
UHGV-1500702_31	eggNOG-mapper	883066.HMPREF9233_00588	VRR_NUC	NA
UHGV-1500702_31	Structural annotation	PF08774, MF_00130, NF002584	NA	NA
UHGV-1500702_33	PHROG	phrog_256	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-1500702_33	UniRef90	UniRef90_UPI001D01F11D	virulence-associated E family protein	NA
UHGV-1500702_33	eggNOG-mapper	536227.CcarbDRAFT_2679	virulence-associated E family protein	NA
UHGV-1500702_33	Pfam	PF05272	Virulence-associated protein E-like domain	VapE-like_dom
UHGV-1500702_33	COG	COG5545	Predicted P-loop ATPase and inactivated derivatives	NA
UHGV-1500702_33	Structural annotation	PF05272, MF_04000, NF005477, NF040562, COG5545	NA	NA
UHGV-1500702_34	eggNOG-mapper	411902.CLOBOL_05675	NA	NA
UHGV-1500702_35	KOfam	K02334	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	NA
UHGV-1500702_35	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1500702_35	UniRef90	UniRef90_UPI001C0FF504	DNA polymerase	NA
UHGV-1500702_35	eggNOG-mapper	1262914.BN533_00799	DNA polymerase	NA
UHGV-1500702_35	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-1500702_35	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-1500702_35	Structural annotation	PF00476, MF_04101, NF011540, COG0749	NA	NA
UHGV-1500702_36	PHROG	phrog_112	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1500702_36	UniRef90	UniRef90_UPI001D02AA51	NA	NA
UHGV-1500702_36	eggNOG-mapper	1123312.KB904572_gene51	NA	NA
UHGV-1500702_36	Pfam	PF10991	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
UHGV-1500702_36	Structural annotation	PF10991, MF_04153	NA	NA
UHGV-1500702_38	PHROG	phrog_69	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1500702_38	UniRef90	UniRef90_UPI001D016DE6	NA	NA
UHGV-1500702_38	eggNOG-mapper	1134413.ANNK01000054_gene2216	NA	NA
UHGV-1500702_38	Pfam	PF10926	NA	DUF2800
UHGV-1500702_38	COG	COG2887	RecB family exonuclease	NA
UHGV-1500702_38	Structural annotation	PF10926, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-1500702_41	PHROG	phrog_2164	NA	unknown function
UHGV-1500702_41	eggNOG-mapper	745310.G432_12285	NA	NA
UHGV-1500702_44	PHROG	phrog_5118	NA	unknown function
UHGV-1500702_48	PHROG	phrog_4068	NA	unknown function
UHGV-1500702_48	Structural annotation	PF06657	NA	NA
UHGV-1500702_49	PHROG	phrog_9576	NA	unknown function
UHGV-1500702_49	UniRef90	UniRef90_J9GVA4	NA	NA
UHGV-1500702_49	eggNOG-mapper	764299.STRIC_0091	NA	NA
UHGV-1500702_51	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-1500702_51	UniRef90	UniRef90_UPI001D0041D6	helix-turn-helix domain-containing protein	NA
UHGV-1500702_51	eggNOG-mapper	903814.ELI_3237	sequence-specific DNA binding	NA
UHGV-1500702_51	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-1500702_51	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1500702_51	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1500702_52	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-1500702_52	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1500702_52	UniRef90	UniRef90_UPI001D01DA96	helix-turn-helix transcriptional regulator	NA
UHGV-1500702_52	eggNOG-mapper	411468.CLOSCI_00323	sequence-specific DNA binding	NA
UHGV-1500702_52	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1500702_52	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1500702_52	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-1500702_53	PHROG	phrog_13160	NA	unknown function
UHGV-1500702_53	UniRef90	UniRef90_UPI001D005BE1	Ig-like domain-containing protein	NA
UHGV-1500702_53	eggNOG-mapper	877418.ATWV01000026_gene2008	NA	NA
UHGV-1500702_53	Structural annotation	PF13028	NA	NA
UHGV-1500702_55	KOfam	K14059	int; integrase	NA
UHGV-1500702_55	PHROG	phrog_1	integrase	integration and excision
UHGV-1500702_55	UniRef90	UniRef90_UPI001D0286D0	tyrosine-type recombinase/integrase	NA
UHGV-1500702_55	eggNOG-mapper	999413.HMPREF1094_02047	Belongs to the 'phage' integrase family	NA
UHGV-1500702_55	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1500702_55	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1500702_55	Pfam	PF09851	Short C-terminal domain	SHOCT
UHGV-1500702_55	COG	COG0582	Integrase/recombinase, includes phage integrase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1500702	Yes	40,037 bps	43.40%	98.55%	0.9736
UHGV-1492344	No	46,804 bps	44.94%	99.90%	0.9750
UHGV-0151539	No	37,951 bps	43.84%	94.17%	0.9795
UHGV-0141271	No	38,102 bps	43.69%	93.64%	0.9789
UHGV-1533627	No	37,317 bps	43.90%	91.90%	0.9788
UHGV-1534959	No	36,191 bps	43.97%	89.95%	0.9776
UHGV-1534490	No	36,183 bps	43.99%	89.93%	0.9777
UHGV-1559484	No	36,183 bps	43.98%	89.93%	0.9777
UHGV-1342829	No	18,128 bps	45.29%	39.90%	0.9808
UHGV-1625673	No	13,283 bps	42.66%	35.24%	0.9814
UHGV-1824764	No	15,906 bps	45.91%	34.76%	0.9798
UHGV-1813229	No	12,913 bps	44.53%	33.12%	0.9798
UHGV-1953824	No	12,164 bps	44.50%	31.19%	0.9805
UHGV-0213460	No	12,148 bps	44.52%	31.15%	0.9802
UHGV-1945122	No	11,146 bps	42.81%	26.77%	0.9789