vOTU-009233

Overview

vOTU representative UHGV-0208210

No. of genomes 3

Genome length 38,204 bps

Completeness 99.90% (high-quality)

Host Ruminococcus E bromii B

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-009233
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00134 › vGENUS-00111 › vSUBGEN-22339 › vOTU-009233
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E bromii B
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208210
BioSample	SAMN00033023
Genome length	38,204 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	55
CDS density	88.95%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208210_1	UniRef90	UniRef90_UPI0013E40EF8	SEC-C domain-containing protein	NA
UHGV-0208210_1	eggNOG-mapper	879310.HMPREF9162_0843	NA	NA
UHGV-0208210_1	COG	COG3012	NA	NA
UHGV-0208210_2	COG	COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	NA
UHGV-0208210_3	KOfam	K14059	int; integrase	NA
UHGV-0208210_3	PHROG	phrog_1	integrase	integration and excision
UHGV-0208210_3	UniRef90	UniRef90_A0A1G5CL52	Phage integrase family protein	NA
UHGV-0208210_3	eggNOG-mapper	693746.OBV_41260	Belongs to the 'phage' integrase family	NA
UHGV-0208210_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208210_3	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0208210_3	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0208210_4	eggNOG-mapper	1232447.BAHW02000014_gene830	NA	NA
UHGV-0208210_6	PHROG	phrog_1914	NA	unknown function
UHGV-0208210_6	UniRef90	UniRef90_UPI000E543E50	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0208210_6	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-0208210_6	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0208210_6	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0208210_6	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0208210_7	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0208210_7	UniRef90	UniRef90_UPI0015F3DE1D	helix-turn-helix domain-containing protein	NA
UHGV-0208210_7	eggNOG-mapper	663278.Ethha_2423	sequence-specific DNA binding	NA
UHGV-0208210_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208210_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0208210_7	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-0208210_8	UniRef90	UniRef90_UPI000E51362F	helix-turn-helix domain-containing protein	NA
UHGV-0208210_8	eggNOG-mapper	411461.DORFOR_00030	Helix-turn-helix XRE-family like proteins	NA
UHGV-0208210_8	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0208210_8	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-0208210_10	PHROG	phrog_585	NA	unknown function
UHGV-0208210_10	UniRef90	UniRef90_UPI00051C896C	NA	NA
UHGV-0208210_10	eggNOG-mapper	1033744.CAEL01000029_gene1306	NA	NA
UHGV-0208210_10	Pfam	PF10711	NA	DUF2513
UHGV-0208210_10	Structural annotation	PF10711, MF_01819, TIGR03433, COG3432	NA	NA
UHGV-0208210_12	PHROG	phrog_8684	NA	unknown function
UHGV-0208210_12	UniRef90	UniRef90_UPI000E48855B	YopX family protein	NA
UHGV-0208210_12	eggNOG-mapper	1121097.JCM15093_2710	YopX protein	NA
UHGV-0208210_12	Pfam	PF09643	YopX protein	YopX
UHGV-0208210_12	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0208210_13	PHROG	phrog_6058	NA	unknown function
UHGV-0208210_13	eggNOG-mapper	1238184.CM001792_gene70	NA	NA
UHGV-0208210_13	Structural annotation	NF033787	NA	NA
UHGV-0208210_15	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0208210_15	PHROG	phrog_6218	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0208210_15	UniRef90	UniRef90_UPI000E47CAB6	ParB/RepB/Spo0J family partition protein	NA
UHGV-0208210_15	eggNOG-mapper	394503.Ccel_3306	Belongs to the ParB family	NA
UHGV-0208210_15	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0208210_15	NCBIFam	TIGR00180.1	ParB/RepB/Spo0J family partition protein	NA
UHGV-0208210_15	COG	COG0710	3-dehydroquinate dehydratase	NA
UHGV-0208210_15	Structural annotation	PF18579, MF_02015, TIGR00180, COG1475	NA	NA
UHGV-0208210_16	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0208210_16	PHROG	phrog_5696	NA	unknown function
UHGV-0208210_16	UniRef90	UniRef90_UPI001B3C9C54	N-6 DNA methylase	NA
UHGV-0208210_16	eggNOG-mapper	397291.C804_06560	N-6 DNA Methylase	NA
UHGV-0208210_16	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0208210_16	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0208210_16	Structural annotation	COG0286	NA	NA
UHGV-0208210_17	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0208210_17	PHROG	phrog_1	integrase	integration and excision
UHGV-0208210_17	UniRef90	UniRef90_A0A3D0XCX4	Integrase	NA
UHGV-0208210_17	eggNOG-mapper	484018.BACPLE_03294	Belongs to the 'phage' integrase family	NA
UHGV-0208210_17	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0208210_17	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208210_17	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0208210_17	Structural annotation	PF00589, PF13495, MF_02055, NF040815, COG4974	NA	NA
UHGV-0208210_18	PHROG	phrog_323	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208210_18	UniRef90	UniRef90_UPI001C01CFF8	SANT/Myb domain-containing protein	NA
UHGV-0208210_18	eggNOG-mapper	756499.Desde_1065	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	NA
UHGV-0208210_18	Pfam	PF00249	Myb-like DNA-binding domain	Myb_DNA-binding
UHGV-0208210_18	dbAPIS	APIS006	Trigger programmed cell death (PCD) by P4 prophage.	NA
UHGV-0208210_18	Structural annotation	PF11112, NF040595	NA	NA
UHGV-0208210_19	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0208210_19	PHROG	phrog_1	integrase	integration and excision
UHGV-0208210_19	UniRef90	UniRef90_UPI001B3C6404	tyrosine-type recombinase/integrase	NA
UHGV-0208210_19	eggNOG-mapper	1117644.MCANPG14_02376	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0208210_19	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0208210_19	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208210_19	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0208210_19	Structural annotation	PF00589, PF13495, MF_01808, TIGR02224, COG4973	NA	NA
UHGV-0208210_20	PHROG	phrog_30343	NA	unknown function
UHGV-0208210_20	UniRef90	UniRef90_UPI0019620485	GNAT family N-acetyltransferase	NA
UHGV-0208210_20	eggNOG-mapper	411473.RUMCAL_00285	NA	NA
UHGV-0208210_20	Structural annotation	PF11039, MF_02210, TIGR03585, COG1670	NA	NA
UHGV-0208210_22	PHROG	phrog_24518	NA	unknown function
UHGV-0208210_22	eggNOG-mapper	1519439.JPJG01000077_gene922	NA	NA
UHGV-0208210_23	PHROG	phrog_824	NA	unknown function
UHGV-0208210_23	UniRef90	UniRef90_A0A3D3D6C6	VRR-NUC domain-containing protein	NA
UHGV-0208210_23	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-0208210_23	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0208210_23	Structural annotation	PF08774	NA	NA
UHGV-0208210_26	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0208210_26	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-0208210_26	Structural annotation	PF21578, NF041486	NA	NA
UHGV-0208210_27	eggNOG-mapper	431943.CKL_4074	NA	NA
UHGV-0208210_27	Structural annotation	TIGR01636	NA	NA
UHGV-0208210_28	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208210_28	UniRef90	UniRef90_A0A412ULY9	HNH endonuclease	NA
UHGV-0208210_28	eggNOG-mapper	1158607.UAU_01026	HNH endonuclease	NA
UHGV-0208210_28	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0208210_28	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0208210_29	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0208210_29	UniRef90	UniRef90_UPI00057D0A7C	P27 family phage terminase small subunit	NA
UHGV-0208210_29	eggNOG-mapper	1211817.CCAT010000053_gene2128	NA	NA
UHGV-0208210_29	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0208210_29	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0208210_30	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0208210_30	UniRef90	UniRef90_A0A412UM03	Terminase large subunit	NA
UHGV-0208210_30	eggNOG-mapper	86416.Clopa_0337	Phage Terminase	NA
UHGV-0208210_30	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0208210_30	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0208210_30	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0208210_30	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0208210_31	PHROG	phrog_12	portal protein	head and packaging
UHGV-0208210_31	UniRef90	UniRef90_A0A412ULV9	Phage portal protein	NA
UHGV-0208210_31	eggNOG-mapper	349161.Dred_2606	Phage portal protein, HK97 family	NA
UHGV-0208210_31	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0208210_31	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0208210_31	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0208210_31	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0208210_32	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0208210_32	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0208210_32	UniRef90	UniRef90_A0A412ULU1	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0208210_32	eggNOG-mapper	86416.Clopa_0340	Belongs to the peptidase S14 family	NA
UHGV-0208210_32	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0208210_32	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0208210_32	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-0208210_33	PHROG	phrog_10	major head protein	head and packaging
UHGV-0208210_33	UniRef90	UniRef90_A0A412ULW9	Phage major capsid protein	NA
UHGV-0208210_33	eggNOG-mapper	1211817.CCAT010000053_gene2132	Phage capsid family	NA
UHGV-0208210_33	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0208210_33	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0208210_33	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0208210_34	UniRef90	UniRef90_A0A6I1MT93	Phage major capsid protein (Fragment)	NA
UHGV-0208210_34	eggNOG-mapper	1235792.C808_00086	Phage capsid family	NA
UHGV-0208210_34	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0208210_35	PHROG	phrog_749	NA	unknown function
UHGV-0208210_35	UniRef90	UniRef90_A0A1G5CMX8	Phage gp6-like head-tail connector protein	NA
UHGV-0208210_35	eggNOG-mapper	1211817.CCAT010000053_gene2133	NA	NA
UHGV-0208210_36	PHROG	phrog_19734	NA	unknown function
UHGV-0208210_36	UniRef90	UniRef90_UPI00057FE645	phage head closure protein	NA
UHGV-0208210_36	eggNOG-mapper	86416.Clopa_0343	NA	NA
UHGV-0208210_36	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0208210_36	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0208210_37	eggNOG-mapper	879305.HMPREF9290_0134	NA	NA
UHGV-0208210_37	Structural annotation	PF05657, MF_00281, COG0016	NA	NA
UHGV-0208210_38	UniRef90	UniRef90_UPI000E5564A4	HK97 gp10 family phage protein	NA
UHGV-0208210_38	eggNOG-mapper	1235792.C808_00089	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0208210_38	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0208210_38	Structural annotation	TIGR01725	NA	NA
UHGV-0208210_39	PHROG	phrog_88	major tail protein	tail
UHGV-0208210_39	UniRef90	UniRef90_A0A1G5CNS8	Phage major tail protein, phi13 family	NA
UHGV-0208210_39	eggNOG-mapper	1321782.HMPREF1986_01362	phage major tail protein, phi13 family	NA
UHGV-0208210_39	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0208210_39	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0208210_40	Structural annotation	PF11836	NA	NA
UHGV-0208210_41	KOfam	K20283	GOLGA4; golgin subfamily A member 4	NA
UHGV-0208210_41	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0208210_41	UniRef90	UniRef90_A0A412ULX0	PhageMin_Tail domain-containing protein	NA
UHGV-0208210_41	eggNOG-mapper	588581.Cpap_1264	Tail tape measure protein, TP901 family	NA
UHGV-0208210_41	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0208210_41	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0208210_41	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0208210_42	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0208210_42	UniRef90	UniRef90_A0A1G5CPA2	Phage-related protein	NA
UHGV-0208210_42	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-0208210_42	COG	COG4722	Phage-related protein YomH	NA
UHGV-0208210_42	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0208210_43	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0208210_43	UniRef90	UniRef90_A0A348ZBV6	Prophage_tail domain-containing protein	NA
UHGV-0208210_43	eggNOG-mapper	1462527.CCDM010000003_gene3730	gp58-like protein	NA
UHGV-0208210_43	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0208210_43	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0208210_43	COG	COG1511	NA	NA
UHGV-0208210_43	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0208210_44	Structural annotation	PF10651, PF08931, TIGR02268	NA	NA
UHGV-0208210_46	UniRef90	UniRef90_A0A374MYZ3	Branched-chain amino acid ABC transporter permease	NA
UHGV-0208210_46	eggNOG-mapper	1007096.BAGW01000032_gene1580	NA	NA
UHGV-0208210_47	PHROG	phrog_881	holin	lysis
UHGV-0208210_47	UniRef90	UniRef90_A0A4Q7P349	Dp-1 family holin	NA
UHGV-0208210_47	eggNOG-mapper	742740.HMPREF9474_02251	Putative phage holin Dp-1	NA
UHGV-0208210_47	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0208210_47	Structural annotation	PF16938	NA	NA
UHGV-0208210_48	PHROG	phrog_322	NA	unknown function
UHGV-0208210_48	UniRef90	UniRef90_UPI000F7ADC69	Gp49 family protein	NA
UHGV-0208210_48	eggNOG-mapper	1445809.A0A0A7AR29_9CAUD	Phage protein (N4 Gp49/phage Sf6 gene 66) family	NA
UHGV-0208210_48	Pfam	PF13876	NA	Phage_gp49_66
UHGV-0208210_48	dbAPIS	APIS043	NA	NA
UHGV-0208210_48	Structural annotation	PF13876	NA	NA
UHGV-0208210_49	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0208210_49	PHROG	phrog_20388	endolysin	lysis
UHGV-0208210_49	UniRef90	UniRef90_A0A374N1L8	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208210_49	eggNOG-mapper	1203606.HMPREF1526_00253	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208210_49	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0208210_49	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0208210_49	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0208210_49	Structural annotation	PF01510, PF01476, PF15591, MF_02014, MF_04111, MF_01354, NF008758, NF010723, TIGR00405, COG3023, COG5004, COG2139	NA	NA
UHGV-0208210_50	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0208210_50	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0208210_50	UniRef90	UniRef90_A0A412UM21	Methyltransferase	NA
UHGV-0208210_50	eggNOG-mapper	1226322.HMPREF1545_02860	NA	NA
UHGV-0208210_50	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0208210_50	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0208210_50	COG	COG0863	DNA modification methylase	NA
UHGV-0208210_50	Structural annotation	PF01555, MF_01872, NF008572, COG0863	NA	NA
UHGV-0208210_51	UniRef90	UniRef90_A0A412ULX9	XRE family transcriptional regulator	NA
UHGV-0208210_51	eggNOG-mapper	679200.HMPREF9333_02253	Helix-turn-helix XRE-family like proteins	NA
UHGV-0208210_51	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0208210_51	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0208210_51	Structural annotation	PF01381, NF040522, COG2944	NA	NA
UHGV-0208210_55	KOfam	K19430	epsN; pyridoxal phosphate-dependent aminotransferase EpsN [EC:2.6.1.-]	NA
UHGV-0208210_55	PHROG	phrog_3139	aminotransferase	other
UHGV-0208210_55	UniRef90	UniRef90_A0A373KWB7	Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA
UHGV-0208210_55	eggNOG-mapper	97139.C824_03239	Belongs to the DegT DnrJ EryC1 family	NA
UHGV-0208210_55	Pfam	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family	DegT_DnrJ_EryC1
UHGV-0208210_55	COG	COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208210	Yes	38,204 bps	39.16%	99.90%	0.9702
UHGV-0179753	No	39,033 bps	39.29%	99.90%	0.9712
UHGV-0167211	No	32,624 bps	40.57%	92.73%	0.9630