vOTU-009823

Overview

No. of genomes 29

Genome length 15,651 bps

Completeness 85.81% (medium-quality)

Host Mediterraneibacter faecis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-009823
Number of genomes	29
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-00777 › vGENUS-04262 › vSUBGEN-48379 › vOTU-009823
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Mediterraneibacter › Mediterraneibacter faecis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1413051
BioSample	SAMEA2737696
Genome length	15,651 bps
CheckV completeness	85.81% (medium-quality)
CheckV contamination	0.00%
CDS count	20
CDS density	93.46%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1413051_3	Pfam	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
UHGV-1413051_3	Structural annotation	PF04014, MF_01193, TIGR02609, COG2336	NA	NA
UHGV-1413051_5	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1413051_5	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1413051_5	UniRef90	UniRef90_A0A843GSA4	DNA-directed DNA polymerase	NA
UHGV-1413051_5	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-1413051_5	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1413051_5	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-1413051_6	Structural annotation	PF17548	NA	NA
UHGV-1413051_7	Structural annotation	PF17427	NA	NA
UHGV-1413051_9	PHROG	phrog_2150	terminase	head and packaging
UHGV-1413051_9	UniRef90	UniRef90_A0A843HJH1	Phage DNA encapsidation protein	NA
UHGV-1413051_9	eggNOG-mapper	10753.B7SSN7_BPNF	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1413051_9	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1413051_9	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1413051_11	KOfam	K07273	acm; lysozyme	NA
UHGV-1413051_11	PHROG	phrog_291	endolysin	lysis
UHGV-1413051_11	UniRef90	UniRef90_UPI0019574C7D	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-1413051_11	eggNOG-mapper	1235798.C817_00299	family 25	NA
UHGV-1413051_11	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1413051_11	Pfam	PF01476	LysM domain	LysM
UHGV-1413051_11	NCBIFam	TIGR02899.1	SafA/ExsA family spore coat assembly protein	NA
UHGV-1413051_11	COG	COG1388	LysM repeat	NA
UHGV-1413051_11	Structural annotation	PF01183, NF007404, COG3757, COG1388	NA	NA
UHGV-1413051_12	PHROG	phrog_11037	NA	unknown function
UHGV-1413051_12	UniRef90	UniRef90_A0A2Z4GUC1	Peptidoglycan hydrolase	NA
UHGV-1413051_12	eggNOG-mapper	1235796.C815_01287	pathogenesis	NA
UHGV-1413051_12	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-1413051_12	COG	COG3942	Surface antigen	NA
UHGV-1413051_12	Structural annotation	PF18013	NA	NA
UHGV-1413051_14	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1413051_14	UniRef90	UniRef90_P13849	Major capsid protein	NA
UHGV-1413051_14	eggNOG-mapper	10756.CAPSD_BPPH2	viral capsid	NA
UHGV-1413051_14	Structural annotation	PF19821, PF07354, MF_04119, TIGR04387, COG1659	NA	NA
UHGV-1413051_16	PHROG	phrog_2248	tail protein	tail
UHGV-1413051_16	UniRef90	UniRef90_A0A843HWB6	Caud_tail_N domain-containing protein	NA
UHGV-1413051_16	eggNOG-mapper	10756.DIT9_BPPH2	NA	NA
UHGV-1413051_16	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1413051_16	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1413051_16	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1413051_17	PHROG	phrog_2038	upper collar connector	connector
UHGV-1413051_17	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-1413051_17	eggNOG-mapper	338473.A6XAD7_9CAUD	Phage Connector (GP10)	NA
UHGV-1413051_17	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1413051_17	Structural annotation	PF05352, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-1413051_18	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1413051_20	Structural annotation	PF08931	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1413051	Yes	15,651 bps	39.34%	85.81%	0.9781
UHGV-1356759	No	15,673 bps	39.53%	99.90%	0.9771
UHGV-1350248	No	15,620 bps	39.46%	99.90%	0.9785
UHGV-1458313	No	15,129 bps	39.30%	99.90%	0.9790
UHGV-1412265	No	15,561 bps	39.43%	85.26%	0.9787
UHGV-0080630	No	15,526 bps	39.30%	85.12%	0.9778
UHGV-1417973	No	15,526 bps	39.30%	85.12%	0.9778
UHGV-0109755	No	15,541 bps	39.60%	83.68%	0.9790
UHGV-0130392	No	15,547 bps	39.44%	83.40%	0.9782
UHGV-1453391	No	15,329 bps	39.68%	83.19%	0.9799
UHGV-2028827	No	15,323 bps	39.67%	83.16%	0.9796
UHGV-0077815	No	15,130 bps	39.73%	82.11%	0.9790
UHGV-1493110	No	13,766 bps	39.52%	75.45%	0.9799
UHGV-1421695	No	11,227 bps	40.12%	70.95%	0.9799
UHGV-0301316	No	9,050 bps	41.14%	57.20%	0.9803
UHGV-1393323	No	9,048 bps	41.16%	57.18%	0.9806
UHGV-1692194	No	10,833 bps	40.48%	49.68%	0.9810
UHGV-0243858	No	14,962 bps	39.27%	47.77%	0.9768
UHGV-1492963	No	14,937 bps	39.32%	47.69%	0.9798
UHGV-2079758	No	14,936 bps	39.07%	47.69%	0.9791
UHGV-1498659	No	14,915 bps	39.63%	47.62%	0.9787
UHGV-2176067	No	14,895 bps	39.44%	47.56%	0.9777
UHGV-0081622	No	14,837 bps	39.33%	47.37%	0.9785
UHGV-1497428	No	14,837 bps	39.33%	47.37%	0.9785
UHGV-0125586	No	14,713 bps	39.71%	46.98%	0.9784
UHGV-0097851	No	14,697 bps	39.21%	46.93%	0.9778
UHGV-1418262	No	14,697 bps	39.21%	46.93%	0.9778
UHGV-0105469	No	14,679 bps	39.51%	46.87%	0.9777
UHGV-0110965	No	10,049 bps	40.43%	28.07%	0.9786