vOTU-009871

Overview

vOTU representative UHGV-1381971

No. of genomes 8

Genome length 36,072 bps

Completeness 99.90% (high-quality)

Host Faecalibacterium prausnitzii D

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-009871
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00033 › vGENUS-00643 › vSUBGEN-11003 › vOTU-009871
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium › Faecalibacterium prausnitzii D
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1381971
BioSample	NA
Genome length	36,072 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	54
CDS density	87.73%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1381971_1	KOfam	K14059	int; integrase	NA
UHGV-1381971_1	PHROG	phrog_1	integrase	integration and excision
UHGV-1381971_1	UniRef90	UniRef90_A0A3F3JU91	Tyr recombinase domain-containing protein	NA
UHGV-1381971_1	eggNOG-mapper	748224.HMPREF9436_03382	Belongs to the 'phage' integrase family	NA
UHGV-1381971_1	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1381971_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1381971_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1381971_1	Structural annotation	PF00589, PF14659, MF_01808, NF007246, COG4973	NA	NA
UHGV-1381971_3	eggNOG-mapper	645991.Sgly_0349	NA	NA
UHGV-1381971_4	eggNOG-mapper	1280676.AUJO01000009_gene1947	NA	NA
UHGV-1381971_4	Structural annotation	PF02556, MF_00821, NF004392, COG1952	NA	NA
UHGV-1381971_5	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-1381971_5	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-1381971_5	UniRef90	UniRef90_A0A6N7TQ25	Helix-turn-helix domain-containing protein	NA
UHGV-1381971_5	eggNOG-mapper	748224.HMPREF9436_03379	sequence-specific DNA binding	NA
UHGV-1381971_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1381971_5	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1381971_6	PHROG	phrog_22683	NA	unknown function
UHGV-1381971_6	UniRef90	UniRef90_A0A3E2U205	NA	NA
UHGV-1381971_6	eggNOG-mapper	1008453.HMPREF9957_0722	NA	NA
UHGV-1381971_6	AcrCatalog	cluster_3962	NA	NA
UHGV-1381971_6	Pfam	PF13783	NA	DUF4177
UHGV-1381971_6	Structural annotation	PF13783, NF008362, COG3499	NA	NA
UHGV-1381971_7	Structural annotation	PF06776, COG5342	NA	NA
UHGV-1381971_8	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-1381971_8	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-1381971_8	UniRef90	UniRef90_A0A2J4JRR4	Helix-turn-helix domain-containing protein	NA
UHGV-1381971_8	eggNOG-mapper	748224.HMPREF9436_01793	NA	NA
UHGV-1381971_8	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1381971_8	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-1381971_8	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-1381971_8	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-1381971_9	UniRef90	UniRef90_A0A2J4JRR6	Toxin-antitoxin system, antitoxin component, Xre family protein	NA
UHGV-1381971_9	eggNOG-mapper	887929.HMP0721_1290	Helix-turn-helix domain of resolvase	NA
UHGV-1381971_9	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1381971_9	Structural annotation	PF05339, NF041951, COG3655	NA	NA
UHGV-1381971_13	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1381971_13	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-1381971_13	UniRef90	UniRef90_A0A2J4JRR8	Phage regulatory protein/antirepressor Ant	NA
UHGV-1381971_13	eggNOG-mapper	1423816.BACQ01000027_gene970	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-1381971_13	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-1381971_13	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1381971_13	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-1381971_13	COG	COG3645	Phage antirepressor protein YoqD, KilAC domain	NA
UHGV-1381971_13	Structural annotation	PF03374, PF09669, TIGR02681, COG3645, COG3561	NA	NA
UHGV-1381971_14	UniRef90	UniRef90_A0A2J4JRR2	XRE family transcriptional regulator	NA
UHGV-1381971_14	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1381971_15	UniRef90	UniRef90_UPI00130EBC54	NA	NA
UHGV-1381971_15	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-1381971_15	Structural annotation	PF05339, MF_00535, NF041951, COG3655	NA	NA
UHGV-1381971_17	Structural annotation	PF12270, NF040944	NA	NA
UHGV-1381971_20	PHROG	phrog_38771	NA	unknown function
UHGV-1381971_21	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1381971_21	UniRef90	UniRef90_E2ZNS9	Erf family protein	NA
UHGV-1381971_21	eggNOG-mapper	748224.HMPREF9436_03360	ERF superfamily	NA
UHGV-1381971_21	Pfam	PF04404	ERF superfamily	ERF
UHGV-1381971_21	Structural annotation	PF04404, COG4712	NA	NA
UHGV-1381971_22	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1381971_22	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1381971_22	UniRef90	UniRef90_A0A6N7TNV3	Single-stranded DNA-binding protein	NA
UHGV-1381971_22	eggNOG-mapper	748224.HMPREF9436_03359	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1381971_22	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1381971_22	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1381971_22	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1381971_22	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1381971_22	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-1381971_23	Structural annotation	PF20964, PF13384, NF011523	NA	NA
UHGV-1381971_24	PHROG	phrog_15768	NA	unknown function
UHGV-1381971_24	UniRef90	UniRef90_E2ZNS6	NA	NA
UHGV-1381971_24	eggNOG-mapper	748224.HMPREF9436_03357	NA	NA
UHGV-1381971_24	Pfam	PF19808	NA	DUF6291
UHGV-1381971_24	Structural annotation	PF19808	NA	NA
UHGV-1381971_25	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-1381971_25	UniRef90	UniRef90_E2ZNS5	Siphovirus Gp157	NA
UHGV-1381971_25	eggNOG-mapper	748224.HMPREF9436_03356	Siphovirus Gp157	NA
UHGV-1381971_25	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-1381971_25	Structural annotation	PF05565	NA	NA
UHGV-1381971_26	UniRef90	UniRef90_A0A845R8R0	NA	NA
UHGV-1381971_28	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1381971_28	UniRef90	UniRef90_A0A329UES5	HNHc domain-containing protein	NA
UHGV-1381971_28	eggNOG-mapper	1291050.JAGE01000001_gene468	endonuclease activity	NA
UHGV-1381971_28	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1381971_28	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1381971_28	Structural annotation	TIGR02646, COG1403	NA	NA
UHGV-1381971_30	PHROG	phrog_3136	NA	unknown function
UHGV-1381971_30	UniRef90	UniRef90_UPI001CBCD733	ASCH domain-containing protein	NA
UHGV-1381971_30	eggNOG-mapper	97139.C824_00742	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-1381971_30	Pfam	PF04266	ASCH domain	ASCH
UHGV-1381971_30	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-1381971_30	Structural annotation	PF04266, MF_00684, NF008917, COG4933	NA	NA
UHGV-1381971_31	KOfam	K03700	recU; recombination protein U	NA
UHGV-1381971_31	PHROG	phrog_843	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1381971_31	UniRef90	UniRef90_A0A1C5P0D5	Holliday junction resolvase RecU	NA
UHGV-1381971_31	eggNOG-mapper	748224.HMPREF9436_03347	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	NA
UHGV-1381971_31	Pfam	PF03838	Recombination protein U	RecU
UHGV-1381971_31	COG	COG3331	Penicillin-binding protein-related factor A, putative recombinase	NA
UHGV-1381971_31	Structural annotation	PF03838, MF_00130, NF002581, COG3331	NA	NA
UHGV-1381971_32	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1381971_32	Structural annotation	PF07374, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-1381971_33	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1381971_33	UniRef90	UniRef90_A0A3F3JUE2	ParB domain-containing protein	NA
UHGV-1381971_33	eggNOG-mapper	748224.HMPREF9436_03344	ParB-like nuclease domain	NA
UHGV-1381971_33	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1381971_33	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1381971_33	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1381971_34	PHROG	phrog_887	queuine tRNA-ribosyltransferase	moron, auxiliary metabolic gene and host takeover
UHGV-1381971_34	UniRef90	UniRef90_A0A6N7S662	ParB domain-containing protein	NA
UHGV-1381971_34	eggNOG-mapper	445970.ALIPUT_02667	NA	NA
UHGV-1381971_34	Structural annotation	PF00331, MF_00168, NF040790, COG0069	NA	NA
UHGV-1381971_35	PHROG	phrog_27044	NA	unknown function
UHGV-1381971_35	UniRef90	UniRef90_A0A3F3JUD8	Citrulline cluster-linked protein	NA
UHGV-1381971_35	eggNOG-mapper	428126.CLOSPI_00164	NA	NA
UHGV-1381971_35	Pfam	PF06177	QueT transporter	QueT
UHGV-1381971_35	COG	COG4708	ECF-type transporter of queuosine precursor, membrane (S) component	NA
UHGV-1381971_35	Structural annotation	PF06177, MF_01572, TIGR04522, COG4708	NA	NA
UHGV-1381971_36	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-1381971_36	UniRef90	UniRef90_UPI0015B69085	helix-turn-helix domain-containing protein	NA
UHGV-1381971_36	eggNOG-mapper	748224.HMPREF9436_03342	transposase activity	NA
UHGV-1381971_36	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-1381971_37	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1381971_37	PHROG	phrog_10250	NA	unknown function
UHGV-1381971_37	UniRef90	UniRef90_E2ZNR1	Phage terminase, large subunit, PBSX family	NA
UHGV-1381971_37	eggNOG-mapper	748224.HMPREF9436_03341	Phage terminase, large subunit, PBSX family	NA
UHGV-1381971_37	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1381971_37	COG	COG1783	Phage terminase large subunit	NA
UHGV-1381971_37	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1381971_38	PHROG	phrog_533	portal protein	head and packaging
UHGV-1381971_38	UniRef90	UniRef90_E2ZNR0	Putative phage minor capsid protein	NA
UHGV-1381971_38	eggNOG-mapper	748224.HMPREF9436_03340	NA	NA
UHGV-1381971_38	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1381971_39	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1381971_39	UniRef90	UniRef90_UPI001CBDED93	phage minor capsid protein	NA
UHGV-1381971_39	eggNOG-mapper	748224.HMPREF9436_03339	NA	NA
UHGV-1381971_39	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1381971_39	COG	COG2369	NA	NA
UHGV-1381971_39	Structural annotation	PF06152, PF12636	NA	NA
UHGV-1381971_41	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-1381971_41	UniRef90	UniRef90_A0A373Q857	YopX domain-containing protein	NA
UHGV-1381971_41	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-1381971_42	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1381971_42	UniRef90	UniRef90_E6U604	Minor structural GP20 protein	NA
UHGV-1381971_42	eggNOG-mapper	663278.Ethha_0093	NA	NA
UHGV-1381971_42	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1381971_42	Structural annotation	PF06810	NA	NA
UHGV-1381971_43	PHROG	phrog_10	major head protein	head and packaging
UHGV-1381971_43	UniRef90	UniRef90_A0A2A7AII3	Phage major capsid protein	NA
UHGV-1381971_43	eggNOG-mapper	1120998.AUFC01000030_gene2236	Phage capsid family	NA
UHGV-1381971_43	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1381971_43	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1381971_43	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1381971_43	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1381971_44	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1381971_45	PHROG	phrog_3366	NA	unknown function
UHGV-1381971_45	Structural annotation	PF20536	NA	NA
UHGV-1381971_46	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1381971_46	UniRef90	UniRef90_A0A2A6Z736	Capsid protein	NA
UHGV-1381971_46	eggNOG-mapper	748224.HMPREF9436_03332	Minor capsid protein	NA
UHGV-1381971_46	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1381971_46	Structural annotation	PF11114	NA	NA
UHGV-1381971_47	PHROG	phrog_3266	tail completion	connector
UHGV-1381971_47	UniRef90	UniRef90_UPI000D830B30	chloramphenicol resistance protein	NA
UHGV-1381971_47	eggNOG-mapper	748224.HMPREF9436_03331	NA	NA
UHGV-1381971_47	Structural annotation	PF12691	NA	NA
UHGV-1381971_48	PHROG	phrog_820	major tail protein	tail
UHGV-1381971_48	eggNOG-mapper	748224.HMPREF9436_03330	NA	NA
UHGV-1381971_48	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1381971_49	PHROG	phrog_4450	NA	unknown function
UHGV-1381971_49	Pfam	PF20378	NA	DUF6673
UHGV-1381971_49	Structural annotation	PF20378	NA	NA
UHGV-1381971_50	PHROG	phrog_706	NA	unknown function
UHGV-1381971_50	UniRef90	UniRef90_E2ZNP9	Bacteriophage Gp15 protein	NA
UHGV-1381971_50	eggNOG-mapper	748224.HMPREF9436_03328	Bacteriophage Gp15 protein	NA
UHGV-1381971_50	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1381971_50	Structural annotation	PF06854	NA	NA
UHGV-1381971_51	PHROG	phrog_28775	tail length tape measure protein	tail
UHGV-1381971_51	UniRef90	UniRef90_E2ZNP7	Phage tail tape measure protein, TP901 family	NA
UHGV-1381971_51	eggNOG-mapper	748224.HMPREF9436_03326	Phage tail tape measure protein, TP901 family	NA
UHGV-1381971_51	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1381971_51	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-1381971_51	COG	COG5283	Phage-related tail protein	NA
UHGV-1381971_51	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1381971_52	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1381971_52	UniRef90	UniRef90_UPI00130E98E0	phage tail family protein	NA
UHGV-1381971_52	eggNOG-mapper	748224.HMPREF9436_03325	Phage tail protein	NA
UHGV-1381971_52	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-1381971_53	PHROG	phrog_538	minor tail protein	tail
UHGV-1381971_53	UniRef90	UniRef90_UPI0011064D4D	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-1381971_53	eggNOG-mapper	748224.HMPREF9436_03324	NA	NA
UHGV-1381971_53	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-1381971_53	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1381971_54	PHROG	phrog_9534	head protein	head and packaging
UHGV-1381971_54	eggNOG-mapper	748224.HMPREF9436_03323	COG NOG18825 non supervised orthologous group	NA
UHGV-1381971_54	Structural annotation	PF20747	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1381971	Yes	36,072 bps	54.98%	99.90%	0.9749
UHGV-1384356	No	36,062 bps	54.98%	99.90%	0.9745
UHGV-1509181	No	33,848 bps	55.37%	95.98%	0.9773
UHGV-1507905	No	29,706 bps	56.69%	84.24%	0.9774
UHGV-1669923	No	17,043 bps	54.49%	43.65%	0.9733
UHGV-0185444	No	12,902 bps	59.88%	35.26%	0.9834
UHGV-1341770	No	13,577 bps	50.75%	34.98%	0.9546
UHGV-1614816	No	10,632 bps	53.01%	24.43%	0.9738