vOTU-010289

Overview

vOTU representative UHGV-1990755

No. of genomes 5

Genome length 38,001 bps

Completeness 99.90% (high-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-010289
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-03716 › vGENUS-19460 › vSUBGEN-37671 › vOTU-010289
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1990755
BioSample	SAMEA2580163
Genome length	38,001 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	58
CDS density	89.12%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1990755_1	PHROG	phrog_1686	tail length tape measure protein	tail
UHGV-1990755_1	UniRef90	UniRef90_A0A413I427	Phage tail tape measure protein	NA
UHGV-1990755_1	eggNOG-mapper	1134413.ANNK01000119_gene2442	Phage tail tape measure protein, TP901 family	NA
UHGV-1990755_1	COG	COG5283	Phage-related tail protein	NA
UHGV-1990755_2	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1990755_2	eggNOG-mapper	272562.CA_C1882	phage tail	NA
UHGV-1990755_2	COG	COG4722	Phage-related protein YomH	NA
UHGV-1990755_2	Structural annotation	PF20753, PF19266, TIGR01633, COG4722	NA	NA
UHGV-1990755_3	PHROG	phrog_18110	NA	unknown function
UHGV-1990755_3	UniRef90	UniRef90_A0A3D4X7F6	Prophage_tail domain-containing protein (Fragment)	NA
UHGV-1990755_3	eggNOG-mapper	457396.CSBG_01060	Phage minor structural protein	NA
UHGV-1990755_3	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1990755_3	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1990755_3	COG	COG4926	Phage-related protein	NA
UHGV-1990755_3	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-1990755_4	PHROG	phrog_38707	NA	unknown function
UHGV-1990755_4	UniRef90	UniRef90_UPI000C073E59	head fiber protein	NA
UHGV-1990755_4	eggNOG-mapper	742733.HMPREF9469_01803	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-1990755_4	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-1990755_5	eggNOG-mapper	411464.DESPIG_00760	tail collar domain protein	NA
UHGV-1990755_5	COG	COG4675	Phage tail collar domain	NA
UHGV-1990755_6	PHROG	phrog_937	hemolysin	other
UHGV-1990755_6	eggNOG-mapper	1469948.JPNB01000002_gene3854	NA	NA
UHGV-1990755_7	PHROG	phrog_1129	holin	lysis
UHGV-1990755_7	UniRef90	UniRef90_A0A396QEU2	Holin	NA
UHGV-1990755_7	eggNOG-mapper	33035.JPJF01000043_gene995	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1990755_7	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1990755_7	Structural annotation	PF06946	NA	NA
UHGV-1990755_8	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-1990755_8	PHROG	phrog_1794	amidase	lysis
UHGV-1990755_8	UniRef90	UniRef90_A0A0J1FYY2	SPOR domain-containing protein	NA
UHGV-1990755_8	eggNOG-mapper	665950.HMPREF1025_01587	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-1990755_8	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1990755_8	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-1990755_8	Pfam	PF05036	SPOR domain	SPOR
UHGV-1990755_8	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-1990755_8	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1990755_8	Structural annotation	PF01510, PF18013, MF_04111, NF008758, COG5632, COG4991	NA	NA
UHGV-1990755_9	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-1990755_9	UniRef90	UniRef90_UPI000BE446A5	helix-turn-helix transcriptional regulator	NA
UHGV-1990755_9	eggNOG-mapper	397288.C806_02605	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1990755_9	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1990755_9	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-1990755_9	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-1990755_11	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-1990755_11	UniRef90	UniRef90_UPI00189F0205	helix-turn-helix transcriptional regulator	NA
UHGV-1990755_11	eggNOG-mapper	1235790.C805_02349	Transcriptional regulator	NA
UHGV-1990755_11	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1990755_11	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-1990755_14	KOfam	K14059	int; integrase	NA
UHGV-1990755_14	PHROG	phrog_1	integrase	integration and excision
UHGV-1990755_14	UniRef90	UniRef90_D4L3N3	Site-specific recombinase XerD	NA
UHGV-1990755_14	eggNOG-mapper	742740.HMPREF9474_03478	DNA integration	NA
UHGV-1990755_14	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1990755_14	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1990755_14	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1990755_14	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-1990755_16	PHROG	phrog_5610	NA	unknown function
UHGV-1990755_16	UniRef90	UniRef90_UPI001958800F	NA	NA
UHGV-1990755_16	eggNOG-mapper	1158612.I580_00642	NA	NA
UHGV-1990755_16	Pfam	PF16729	NA	DUF5067
UHGV-1990755_17	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-1990755_17	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1990755_17	UniRef90	UniRef90_A0A0J1G861	HTH cro/C1-type domain-containing protein	NA
UHGV-1990755_17	eggNOG-mapper	33035.JPJF01000055_gene1671	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1990755_17	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1990755_17	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1990755_17	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-1990755_18	UniRef90	UniRef90_UPI001D08BC4F	helix-turn-helix domain-containing protein	NA
UHGV-1990755_18	Structural annotation	PF05339, NF041951, COG1476	NA	NA
UHGV-1990755_20	eggNOG-mapper	1235793.C809_02221	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-1990755_20	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-1990755_22	PHROG	phrog_36464	NA	unknown function
UHGV-1990755_22	eggNOG-mapper	742740.HMPREF9474_03484	NA	NA
UHGV-1990755_22	Structural annotation	PF09035	NA	NA
UHGV-1990755_25	eggNOG-mapper	1304866.K413DRAFT_3014	NA	NA
UHGV-1990755_26	PHROG	phrog_659	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1990755_26	UniRef90	UniRef90_UPI000E49F6EC	NA	NA
UHGV-1990755_26	eggNOG-mapper	33035.JPJF01000135_gene5082	NA	NA
UHGV-1990755_26	Pfam	PF06378	NA	DUF1071
UHGV-1990755_26	Structural annotation	PF06378, TIGR00607, COG5055	NA	NA
UHGV-1990755_27	PHROG	phrog_398	NA	unknown function
UHGV-1990755_27	UniRef90	UniRef90_UPI0001F01BA5	putative HNHc nuclease	NA
UHGV-1990755_27	eggNOG-mapper	33035.JPJF01000122_gene2462	Putative HNHc nuclease	NA
UHGV-1990755_27	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-1990755_27	Structural annotation	PF16784	NA	NA
UHGV-1990755_28	PHROG	phrog_2113	NA	unknown function
UHGV-1990755_28	eggNOG-mapper	1160721.RBI_II00485	NA	NA
UHGV-1990755_28	Structural annotation	PF08279, TIGR00122, COG1654	NA	NA
UHGV-1990755_29	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1990755_29	eggNOG-mapper	33035.JPJF01000122_gene2460	NA	NA
UHGV-1990755_29	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-1990755_30	PHROG	phrog_19658	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1990755_30	UniRef90	UniRef90_A0A2M8TEU8	Helix-turn-helix domain-containing protein	NA
UHGV-1990755_30	eggNOG-mapper	742740.HMPREF9474_03492	DnaD domain protein	NA
UHGV-1990755_30	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1990755_30	Structural annotation	PF04492, MF_01911, TIGR01610, COG3355	NA	NA
UHGV-1990755_31	PHROG	phrog_9804	NA	unknown function
UHGV-1990755_31	UniRef90	UniRef90_A0A0J1G7S1	Inhibitor_G39P domain-containing protein	NA
UHGV-1990755_31	eggNOG-mapper	585394.RHOM_14005	Loader and inhibitor of phage G40P	NA
UHGV-1990755_31	AcrCatalog	cluster_137185	NA	NA
UHGV-1990755_31	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-1990755_31	Structural annotation	PF11417	NA	NA
UHGV-1990755_32	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-1990755_32	PHROG	phrog_3502	NA	unknown function
UHGV-1990755_32	UniRef90	UniRef90_A0A0J1G875	LexA_DNA_bind domain-containing protein	NA
UHGV-1990755_32	eggNOG-mapper	877414.ATWA01000032_gene1295	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-1990755_32	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-1990755_32	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-1990755_33	UniRef90	UniRef90_A0A0J1J397	HTH_7 domain-containing protein	NA
UHGV-1990755_33	Pfam	PF02796	Helix-turn-helix domain of resolvase	HTH_7
UHGV-1990755_34	PHROG	phrog_8684	NA	unknown function
UHGV-1990755_34	UniRef90	UniRef90_A0A1C5WGR7	YopX protein	NA
UHGV-1990755_34	eggNOG-mapper	1226322.HMPREF1545_00036	YopX protein	NA
UHGV-1990755_34	Pfam	PF09643	YopX protein	YopX
UHGV-1990755_34	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1990755_37	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-1990755_37	PHROG	phrog_116	DNA methyltransferase	other
UHGV-1990755_37	UniRef90	UniRef90_C0BC27	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1990755_37	eggNOG-mapper	1499683.CCFF01000017_gene2594	PFAM C-5 cytosine-specific DNA methylase	NA
UHGV-1990755_37	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-1990755_37	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1990755_37	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1990755_37	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1990755_37	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-1990755_38	PHROG	phrog_11237	NA	unknown function
UHGV-1990755_38	eggNOG-mapper	610130.Closa_0738	NA	NA
UHGV-1990755_39	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-1990755_39	UniRef90	UniRef90_A0A0J1J3A3	HTH cro/C1-type domain-containing protein	NA
UHGV-1990755_39	eggNOG-mapper	1415774.U728_2928	Helix-turn-helix XRE-family like proteins	NA
UHGV-1990755_39	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1990755_39	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1990755_40	AcrCatalog	cluster_180761	NA	NA
UHGV-1990755_41	KOfam	K07339	hicA; mRNA interferase HicA [EC:3.1.-.-]	NA
UHGV-1990755_41	PHROG	phrog_353	toxin	moron, auxiliary metabolic gene and host takeover
UHGV-1990755_41	UniRef90	UniRef90_A0A1Q9J5T7	Toxin-antitoxin system, toxin component, HicA family protein	NA
UHGV-1990755_41	eggNOG-mapper	97138.C820_00754	HicA toxin of bacterial toxin-antitoxin,	NA
UHGV-1990755_41	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-1990755_41	Structural annotation	PF07927	NA	NA
UHGV-1990755_42	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-1990755_42	UniRef90	UniRef90_A0A1I5LYR1	Predicted nuclease of the RNAse H fold, HicB family	NA
UHGV-1990755_42	eggNOG-mapper	1120998.AUFC01000014_gene1700	NA	NA
UHGV-1990755_42	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-1990755_42	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-1990755_42	Structural annotation	PF15919, COG1598	NA	NA
UHGV-1990755_43	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1990755_43	UniRef90	UniRef90_A0A1C6DZR4	HNH endonuclease	NA
UHGV-1990755_43	eggNOG-mapper	1158607.UAU_01026	HNH endonuclease	NA
UHGV-1990755_43	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1990755_43	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1990755_45	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1990755_46	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1990755_46	UniRef90	UniRef90_A0A413HUL5	Terminase large subunit	NA
UHGV-1990755_46	eggNOG-mapper	1235798.C817_02581	Phage terminase-like protein large subunit	NA
UHGV-1990755_46	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1990755_46	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1990755_46	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1990755_46	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1990755_47	PHROG	phrog_12	portal protein	head and packaging
UHGV-1990755_47	UniRef90	UniRef90_A0A1C6E0D8	Phage portal protein, HK97 family	NA
UHGV-1990755_47	eggNOG-mapper	86416.Clopa_0339	Phage portal protein	NA
UHGV-1990755_47	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1990755_47	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1990755_47	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1990755_47	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1990755_48	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1990755_48	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1990755_48	UniRef90	UniRef90_A0A1C6DZF0	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-1990755_48	eggNOG-mapper	1235792.C808_00085	Clp protease	NA
UHGV-1990755_48	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1990755_48	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1990755_48	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-1990755_49	PHROG	phrog_10	major head protein	head and packaging
UHGV-1990755_49	UniRef90	UniRef90_A0A4S2A8V8	Phage major capsid protein	NA
UHGV-1990755_49	eggNOG-mapper	610130.Closa_0744	Phage capsid family	NA
UHGV-1990755_49	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1990755_49	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1990755_49	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1990755_49	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1990755_50	PHROG	phrog_749	NA	unknown function
UHGV-1990755_50	eggNOG-mapper	349161.Dred_2603	NA	NA
UHGV-1990755_51	PHROG	phrog_19734	NA	unknown function
UHGV-1990755_51	UniRef90	UniRef90_A0A0D8I708	Phage head-tail joining protein	NA
UHGV-1990755_51	eggNOG-mapper	1235792.C808_00088	NA	NA
UHGV-1990755_51	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1990755_52	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1990755_52	UniRef90	UniRef90_A0A1C6DYP9	Phage protein, HK97 gp10 family	NA
UHGV-1990755_52	eggNOG-mapper	97139.C824_05967	Phage protein, HK97 gp10 family	NA
UHGV-1990755_52	Structural annotation	TIGR01725	NA	NA
UHGV-1990755_53	eggNOG-mapper	1123075.AUDP01000020_gene1517	NA	NA
UHGV-1990755_53	Structural annotation	PF05657, NF040576, COG3167	NA	NA
UHGV-1990755_54	PHROG	phrog_88	major tail protein	tail
UHGV-1990755_54	UniRef90	UniRef90_A0A1C6DYZ6	Phage major tail protein, phi13 family	NA
UHGV-1990755_54	eggNOG-mapper	1123075.AUDP01000020_gene1518	phage major tail protein, phi13 family	NA
UHGV-1990755_54	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-1990755_54	COG	COG5492	NA	NA
UHGV-1990755_54	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-1990755_55	PHROG	phrog_2115	tail protein	tail
UHGV-1990755_55	Structural annotation	PF11836	NA	NA
UHGV-1990755_58	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-1990755_58	PHROG	phrog_33680	NA	unknown function
UHGV-1990755_58	UniRef90	UniRef90_A0A2Z4I560	Phage tail protein	NA
UHGV-1990755_58	eggNOG-mapper	203119.Cthe_1618	tail tape measure protein, TP901	NA
UHGV-1990755_58	COG	COG5283	Phage-related tail protein	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1990755	Yes	38,001 bps	40.14%	99.90%	0.9783
UHGV-0076416	No	37,020 bps	40.48%	98.69%	0.9790
UHGV-0188273	No	36,138 bps	40.34%	97.94%	0.9784
UHGV-1378702	No	36,138 bps	40.34%	97.94%	0.9794
UHGV-1537150	No	34,510 bps	40.52%	91.99%	0.9792