vOTU-010448

Overview

No. of genomes 6

Genome length 40,562 bps

Completeness 99.90% (high-quality)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-010448
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00035 › vSUBFAM-06469 › vGENUS-16317 › vSUBGEN-29244 › vOTU-010448
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0010330
BioSample	SAMEA4765935
Genome length	40,562 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	53
CDS density	88.29%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0010330_1	eggNOG-mapper	553973.CLOHYLEM_07148	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0010330_2	PHROG	phrog_1009	NA	unknown function
UHGV-0010330_2	UniRef90	UniRef90_A0A173RD60	Branched-chain amino acid ABC transporter permease	NA
UHGV-0010330_2	eggNOG-mapper	742765.HMPREF9457_03364	NA	NA
UHGV-0010330_3	UniRef90	UniRef90_UPI0013B3ACC1	ABC transporter ATP-binding protein	NA
UHGV-0010330_3	eggNOG-mapper	1121895.Q765_12460	NA	NA
UHGV-0010330_3	Pfam	PF20712	Cyanobacterial TRADD-N associated 2-Transmembrane domain	CyanoTRADDas_TM
UHGV-0010330_5	eggNOG-mapper	1196322.A370_05298	NA	NA
UHGV-0010330_6	KOfam	K03651	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	NA
UHGV-0010330_6	PHROG	phrog_7158	NA	unknown function
UHGV-0010330_6	UniRef90	UniRef90_A0A6M1WR81	Metallophos domain-containing protein	NA
UHGV-0010330_6	eggNOG-mapper	862514.HMPREF0623_0302	Calcineurin-like phosphoesterase	NA
UHGV-0010330_6	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-0010330_7	PHROG	phrog_14030	NA	unknown function
UHGV-0010330_7	UniRef90	UniRef90_UPI0018999D57	phage tail tip lysozyme	NA
UHGV-0010330_7	eggNOG-mapper	33035.JPJF01000093_gene2240	NlpC/P60 family	NA
UHGV-0010330_7	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0010330_7	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0010330_7	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0010330_7	Structural annotation	PF18013, PF05382, NF033742, COG0791	NA	NA
UHGV-0010330_8	PHROG	phrog_13289	tail protein	tail
UHGV-0010330_8	UniRef90	UniRef90_UPI001570BE36	phage tail protein	NA
UHGV-0010330_8	eggNOG-mapper	1235798.C817_02568	Prophage endopeptidase tail	NA
UHGV-0010330_8	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0010330_8	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0010330_8	COG	COG2885	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	NA
UHGV-0010330_8	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0010330_9	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0010330_9	UniRef90	UniRef90_UPI000E50043B	phage tail protein	NA
UHGV-0010330_9	eggNOG-mapper	1232452.BAIB02000007_gene1615	phage tail	NA
UHGV-0010330_9	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0010330_9	COG	COG4722	Phage-related protein YomH	NA
UHGV-0010330_9	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0010330_10	KOfam	K20282	GCC2; GRIP and coiled-coil domain-containing protein 2	NA
UHGV-0010330_10	PHROG	phrog_5218	NA	unknown function
UHGV-0010330_10	UniRef90	UniRef90_A0A174CPF9	Phage-related minor tail protein	NA
UHGV-0010330_10	eggNOG-mapper	1235792.C808_03050	Phage-related minor tail protein	NA
UHGV-0010330_10	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0010330_10	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0010330_10	Structural annotation	PF10145, PF05384, NF033930, COG5280	NA	NA
UHGV-0010330_12	eggNOG-mapper	1235792.C808_03058	NA	NA
UHGV-0010330_12	Structural annotation	PF11836	NA	NA
UHGV-0010330_13	PHROG	phrog_88	major tail protein	tail
UHGV-0010330_13	UniRef90	UniRef90_A0A174CNN5	Phage major tail protein, phi13 family	NA
UHGV-0010330_13	eggNOG-mapper	1235792.C808_03059	phage major tail protein, phi13 family	NA
UHGV-0010330_13	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0010330_13	COG	COG5492	NA	NA
UHGV-0010330_13	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0010330_14	UniRef90	UniRef90_A0A7G9G8N8	Phage tail protein	NA
UHGV-0010330_14	eggNOG-mapper	1235792.C808_03059	phage major tail protein, phi13 family	NA
UHGV-0010330_14	COG	COG5492	NA	NA
UHGV-0010330_14	Structural annotation	PF05657	NA	NA
UHGV-0010330_15	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0010330_15	UniRef90	UniRef90_A0A174CK72	Phage protein, HK97 gp10 family	NA
UHGV-0010330_15	eggNOG-mapper	97139.C824_05967	Phage protein, HK97 gp10 family	NA
UHGV-0010330_15	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0010330_15	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0010330_15	Structural annotation	TIGR01725	NA	NA
UHGV-0010330_16	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0010330_16	UniRef90	UniRef90_A5ZPL6	Putative phage head-tail adaptor	NA
UHGV-0010330_16	eggNOG-mapper	1235792.C808_03061	NA	NA
UHGV-0010330_16	Structural annotation	PF19586, TIGR01563, COG5614	NA	NA
UHGV-0010330_17	PHROG	phrog_5223	neck protein	connector
UHGV-0010330_17	eggNOG-mapper	1235792.C808_03062	NA	NA
UHGV-0010330_17	Structural annotation	TIGR01560	NA	NA
UHGV-0010330_18	PHROG	phrog_10	major head protein	head and packaging
UHGV-0010330_18	UniRef90	UniRef90_A0A174CKE2	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0010330_18	eggNOG-mapper	1235792.C808_03063	phage major capsid protein, HK97 family	NA
UHGV-0010330_18	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0010330_18	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0010330_18	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0010330_18	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0010330_19	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0010330_19	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0010330_19	UniRef90	UniRef90_A0A174CN91	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0010330_19	eggNOG-mapper	97139.C824_05971	Belongs to the peptidase S14 family	NA
UHGV-0010330_19	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0010330_19	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0010330_19	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-0010330_20	PHROG	phrog_12	portal protein	head and packaging
UHGV-0010330_20	UniRef90	UniRef90_A0A174CJV0	Phage portal protein, HK97 family	NA
UHGV-0010330_20	eggNOG-mapper	1235792.C808_03065	Phage portal protein	NA
UHGV-0010330_20	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0010330_20	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0010330_20	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0010330_20	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0010330_21	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0010330_21	UniRef90	UniRef90_F7JW13	Phage terminase	NA
UHGV-0010330_21	eggNOG-mapper	97139.C824_05973	Terminase	NA
UHGV-0010330_21	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0010330_21	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0010330_21	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0010330_21	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0010330_22	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0010330_22	UniRef90	UniRef90_UPI000E4F2EB1	phage terminase small subunit P27 family	NA
UHGV-0010330_22	eggNOG-mapper	1235792.C808_03067	Phage terminase, small subunit	NA
UHGV-0010330_22	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0010330_22	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0010330_22	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0010330_22	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0010330_23	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0010330_23	UniRef90	UniRef90_A0A174CMA9	HNH domain-containing protein	NA
UHGV-0010330_23	eggNOG-mapper	1235792.C808_03068	HNH endonuclease	NA
UHGV-0010330_23	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0010330_23	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0010330_23	Structural annotation	PF05766	NA	NA
UHGV-0010330_24	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0010330_24	UniRef90	UniRef90_A0A373STV4	NA	NA
UHGV-0010330_24	eggNOG-mapper	411461.DORFOR_00754	sigma factor activity	NA
UHGV-0010330_24	Pfam	PF07374	NA	DUF1492
UHGV-0010330_24	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0010330_24	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-0010330_25	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0010330_25	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0010330_25	UniRef90	UniRef90_A0A174DTF6	Single-stranded DNA-binding protein	NA
UHGV-0010330_25	eggNOG-mapper	1232453.BAIF02000062_gene1851	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0010330_25	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0010330_25	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0010330_25	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0010330_25	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0010330_25	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0010330_27	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0010330_27	PHROG	phrog_1	integrase	integration and excision
UHGV-0010330_27	UniRef90	UniRef90_UPI00156E0BE9	tyrosine-type recombinase/integrase	NA
UHGV-0010330_27	eggNOG-mapper	888743.HMPREF9141_2430	Belongs to the 'phage' integrase family	NA
UHGV-0010330_27	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0010330_27	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0010330_27	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0010330_27	Structural annotation	PF00589, PF02899, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0010330_28	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0010330_28	PHROG	phrog_5696	NA	unknown function
UHGV-0010330_28	UniRef90	UniRef90_A0A1C5WE14	Type I restriction-modification system methyltransferase subunit	NA
UHGV-0010330_28	eggNOG-mapper	1118057.CAGX01000058_gene108	site-specific DNA-methyltransferase (adenine-specific) activity	NA
UHGV-0010330_28	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0010330_28	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0010330_28	Structural annotation	COG0286	NA	NA
UHGV-0010330_31	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0010330_31	UniRef90	UniRef90_A0A3R6GLG2	HNH endonuclease	NA
UHGV-0010330_31	eggNOG-mapper	610130.Closa_0730	HNH endonuclease	NA
UHGV-0010330_31	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0010330_31	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0010330_32	PHROG	phrog_7566	NA	unknown function
UHGV-0010330_32	eggNOG-mapper	97139.C824_05985	NA	NA
UHGV-0010330_33	PHROG	phrog_15077	NA	unknown function
UHGV-0010330_33	eggNOG-mapper	97139.C824_05986	NA	NA
UHGV-0010330_33	Structural annotation	PF11300, NF033725	NA	NA
UHGV-0010330_34	PHROG	phrog_8470	NA	unknown function
UHGV-0010330_34	UniRef90	UniRef90_UPI001D086F83	PcfJ domain-containing protein	NA
UHGV-0010330_34	eggNOG-mapper	1235792.C808_00066	PcfJ-like protein	NA
UHGV-0010330_34	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0010330_34	Structural annotation	PF14284	NA	NA
UHGV-0010330_35	eggNOG-mapper	1235792.C808_00065	NA	NA
UHGV-0010330_36	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0010330_36	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0010330_36	UniRef90	UniRef90_R9JUW5	RNase H type-1 domain-containing protein	NA
UHGV-0010330_36	eggNOG-mapper	1235792.C808_03083	RNase H	NA
UHGV-0010330_36	Pfam	PF00075	RNase H	RNase_H
UHGV-0010330_36	COG	COG0328	Ribonuclease HI	NA
UHGV-0010330_36	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0010330_37	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0010330_37	eggNOG-mapper	1280698.AUJS01000007_gene1013	NA	NA
UHGV-0010330_37	Structural annotation	PF01446	NA	NA
UHGV-0010330_45	PHROG	phrog_1305	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0010330_45	UniRef90	UniRef90_UPI00156EDECA	NA	NA
UHGV-0010330_45	eggNOG-mapper	445974.CLORAM_02962	NA	NA
UHGV-0010330_45	Structural annotation	PF06573	NA	NA
UHGV-0010330_48	PHROG	phrog_585	NA	unknown function
UHGV-0010330_48	UniRef90	UniRef90_A0A7G9G8R3	NA	NA
UHGV-0010330_48	eggNOG-mapper	411465.PEPMIC_00712	NA	NA
UHGV-0010330_48	Pfam	PF10711	NA	DUF2513
UHGV-0010330_49	Structural annotation	COG1321	NA	NA
UHGV-0010330_50	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0010330_50	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0010330_50	UniRef90	UniRef90_R9K5B1	HTH cro/C1-type domain-containing protein	NA
UHGV-0010330_50	eggNOG-mapper	1235792.C808_00054	Helix-turn-helix XRE-family like proteins	NA
UHGV-0010330_50	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0010330_50	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0010330_50	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0010330_52	UniRef90	UniRef90_UPI001F3985DB	NA	NA
UHGV-0010330_52	eggNOG-mapper	661087.HMPREF1008_01261	sequence-specific DNA binding	NA
UHGV-0010330_52	COG	COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	NA
UHGV-0010330_53	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0010330_53	PHROG	phrog_95	integrase	integration and excision
UHGV-0010330_53	UniRef90	UniRef90_UPI001C0ED967	recombinase family protein	NA
UHGV-0010330_53	eggNOG-mapper	411459.RUMOBE_00967	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-0010330_53	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0010330_53	Pfam	PF07508	Recombinase	Recombinase
UHGV-0010330_53	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0010330_53	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0010330_53	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0010330	Yes	40,562 bps	37.85%	99.90%	0.9749
UHGV-0007513	No	37,577 bps	38.29%	92.78%	0.9736
UHGV-0007583	No	37,577 bps	38.29%	92.78%	0.9736
UHGV-0009892	No	37,577 bps	38.29%	92.78%	0.9736
UHGV-0014302	No	37,577 bps	38.29%	92.78%	0.9736
UHGV-0002586	No	35,206 bps	37.96%	86.80%	0.9783