vOTU-010885

Overview

vOTU representative UHGV-0198359

No. of genomes 10

Genome length 42,150 bps

Completeness 94.26% (high-quality)

Host Ruminococcus B gnavus

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-010885
Number of genomes	10
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00099 › vGENUS-16433 › vSUBGEN-29655 › vOTU-010885
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Ruminococcus B › Ruminococcus B gnavus
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0198359
BioSample	SAMN05827122
Genome length	42,150 bps
CheckV completeness	94.26% (high-quality)
CheckV contamination	0.00%
CDS count	67
CDS density	90.52%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0198359_4	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0198359_4	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0198359_4	UniRef90	UniRef90_UPI000E4DC652	antA/AntB antirepressor family protein	NA
UHGV-0198359_4	eggNOG-mapper	1408823.AXUS01000009_gene1978	AntA/AntB antirepressor	NA
UHGV-0198359_4	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-0198359_4	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0198359_4	Structural annotation	PF08346, TIGR02681, COG3561	NA	NA
UHGV-0198359_6	PHROG	phrog_36464	NA	unknown function
UHGV-0198359_6	eggNOG-mapper	411461.DORFOR_01136	NA	NA
UHGV-0198359_6	Structural annotation	PF09035	NA	NA
UHGV-0198359_9	PHROG	phrog_5070	NA	unknown function
UHGV-0198359_9	UniRef90	UniRef90_C6L9Y5	Bacterial transferase hexapeptide repeat protein	NA
UHGV-0198359_9	eggNOG-mapper	411470.RUMGNA_02189	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0198359_9	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-0198359_12	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0198359_12	UniRef90	UniRef90_A7B3R2	Siphovirus Gp157	NA
UHGV-0198359_12	eggNOG-mapper	411470.RUMGNA_02192	Siphovirus Gp157	NA
UHGV-0198359_12	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0198359_12	Structural annotation	PF05565	NA	NA
UHGV-0198359_13	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0198359_13	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-0198359_13	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0198359_13	Structural annotation	PF04098, TIGR00607, COG5055	NA	NA
UHGV-0198359_14	eggNOG-mapper	411470.RUMGNA_02194	NA	NA
UHGV-0198359_14	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0198359_15	PHROG	phrog_7566	NA	unknown function
UHGV-0198359_15	UniRef90	UniRef90_A0A3E4V7Z6	Phosphoenolpyruvate carboxykinase	NA
UHGV-0198359_16	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0198359_16	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0198359_16	UniRef90	UniRef90_A7B3R6	Crossover junction endodeoxyribonuclease RusA	NA
UHGV-0198359_16	eggNOG-mapper	411470.RUMGNA_02196	COG COG4570 Holliday junction resolvase	NA
UHGV-0198359_16	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0198359_16	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0198359_16	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0198359_17	PHROG	phrog_1163	NA	unknown function
UHGV-0198359_17	UniRef90	UniRef90_A0A415S878	Replication protein	NA
UHGV-0198359_17	eggNOG-mapper	1042163.BRLA_c031420	Conserved phage C-terminus (Phg_2220_C)	NA
UHGV-0198359_17	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0198359_17	Pfam	PF09524	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
UHGV-0198359_17	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0198359_17	COG	COG1846	DNA-binding transcriptional regulator, MarR family	NA
UHGV-0198359_17	Structural annotation	PF09681, PF09524, TIGR01714, TIGR02220, COG3756	NA	NA
UHGV-0198359_18	PHROG	phrog_25488	NA	unknown function
UHGV-0198359_18	Structural annotation	PF12844, PF01316, MF_00535, TIGR00270, COG1476	NA	NA
UHGV-0198359_20	UniRef90	UniRef90_UPI000E4AEE34	NA	NA
UHGV-0198359_20	eggNOG-mapper	411470.RUMGNA_02006	NA	NA
UHGV-0198359_20	Pfam	PF14199	NA	DUF4317
UHGV-0198359_20	Structural annotation	PF14199, MF_00730, NF001557, COG3081	NA	NA
UHGV-0198359_22	UniRef90	UniRef90_K1TWB1	DNA methylase (Fragment)	NA
UHGV-0198359_22	eggNOG-mapper	658655.HMPREF0988_00878	DNA methylase	NA
UHGV-0198359_22	COG	COG0863	DNA modification methylase	NA
UHGV-0198359_23	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0198359_23	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0198359_23	UniRef90	UniRef90_A0A3A5TEY8	Methyltransferase	NA
UHGV-0198359_23	eggNOG-mapper	658655.HMPREF0988_00878	DNA methylase	NA
UHGV-0198359_23	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0198359_23	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0198359_23	COG	COG0863	DNA modification methylase	NA
UHGV-0198359_23	Structural annotation	PF01555, MF_00786, NF010253, COG0863	NA	NA
UHGV-0198359_24	UniRef90	UniRef90_A0A894KBW2	LexA_DNA_bind domain-containing protein	NA
UHGV-0198359_24	eggNOG-mapper	97139.C824_00134	NA	NA
UHGV-0198359_25	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0198359_25	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0198359_25	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0198359_25	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0198359_25	Structural annotation	PF14354, TIGR03655, COG3811	NA	NA
UHGV-0198359_27	PHROG	phrog_8684	NA	unknown function
UHGV-0198359_27	UniRef90	UniRef90_A0A415S8F9	YopX domain-containing protein	NA
UHGV-0198359_27	eggNOG-mapper	742723.HMPREF9477_00921	YopX protein	NA
UHGV-0198359_27	Pfam	PF09643	YopX protein	YopX
UHGV-0198359_29	UniRef90	UniRef90_A0A415S8F5	NA	NA
UHGV-0198359_29	eggNOG-mapper	742723.HMPREF9477_00919	NA	NA
UHGV-0198359_29	Pfam	PF04448	NA	DUF551
UHGV-0198359_32	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0198359_32	UniRef90	UniRef90_UPI001C8D2455	RNA polymerase subunit sigma-70	NA
UHGV-0198359_32	eggNOG-mapper	1235798.C817_03486	NA	NA
UHGV-0198359_32	Structural annotation	PF02996	NA	NA
UHGV-0198359_35	PHROG	phrog_2412	NA	unknown function
UHGV-0198359_35	UniRef90	UniRef90_UPI001E414EFE	KGG domain-containing protein	NA
UHGV-0198359_35	eggNOG-mapper	742723.HMPREF9477_00912	NA	NA
UHGV-0198359_36	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0198359_36	PHROG	phrog_10250	NA	unknown function
UHGV-0198359_36	UniRef90	UniRef90_UPI001CD3A8F7	PBSX family phage terminase large subunit	NA
UHGV-0198359_36	eggNOG-mapper	1235799.C818_04217	Phage terminase large subunit	NA
UHGV-0198359_36	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0198359_36	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0198359_36	COG	COG1783	Phage terminase large subunit	NA
UHGV-0198359_36	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0198359_37	PHROG	phrog_533	portal protein	head and packaging
UHGV-0198359_37	UniRef90	UniRef90_UPI00156E2A2F	phage capsid protein	NA
UHGV-0198359_37	eggNOG-mapper	33035.JPJF01000030_gene2289	NA	NA
UHGV-0198359_37	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0198359_38	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0198359_38	UniRef90	UniRef90_UPI001CD5437D	phage minor capsid protein	NA
UHGV-0198359_38	eggNOG-mapper	742723.HMPREF9477_00909	Phage minor capsid protein 2	NA
UHGV-0198359_38	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0198359_38	COG	COG2369	NA	NA
UHGV-0198359_38	Structural annotation	PF06152	NA	NA
UHGV-0198359_39	UniRef90	UniRef90_R6AQU3	Conserved protein	NA
UHGV-0198359_39	eggNOG-mapper	1423758.BN55_08460	NA	NA
UHGV-0198359_39	Structural annotation	PF20111	NA	NA
UHGV-0198359_40	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0198359_40	UniRef90	UniRef90_UPI000E47EB84	phage scaffolding protein	NA
UHGV-0198359_40	eggNOG-mapper	1235799.C818_04222	Phage minor structural protein GP20	NA
UHGV-0198359_40	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0198359_40	Structural annotation	PF06810	NA	NA
UHGV-0198359_41	eggNOG-mapper	1235799.C818_04223	NA	NA
UHGV-0198359_41	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0198359_42	UniRef90	UniRef90_UPI001D05A857	head fiber protein	NA
UHGV-0198359_42	eggNOG-mapper	1232443.BAIA02000078_gene28	domain, Protein	NA
UHGV-0198359_42	Pfam	PF11133	Head fiber protein	Phage_head_fibr
UHGV-0198359_42	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-0198359_43	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0198359_43	eggNOG-mapper	1235799.C818_04224	NA	NA
UHGV-0198359_44	PHROG	phrog_3366	NA	unknown function
UHGV-0198359_44	eggNOG-mapper	742723.HMPREF9477_00903	NA	NA
UHGV-0198359_44	Pfam	PF20536	NA	DUF6751
UHGV-0198359_44	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0198359_45	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0198359_45	UniRef90	UniRef90_UPI000E48DD75	minor capsid protein	NA
UHGV-0198359_45	eggNOG-mapper	742723.HMPREF9477_00902	Minor capsid protein	NA
UHGV-0198359_45	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0198359_45	Structural annotation	PF11114	NA	NA
UHGV-0198359_46	PHROG	phrog_3266	tail completion	connector
UHGV-0198359_46	UniRef90	UniRef90_UPI001570657D	chloramphenicol resistance protein	NA
UHGV-0198359_46	eggNOG-mapper	742723.HMPREF9477_00901	NA	NA
UHGV-0198359_46	Structural annotation	PF12691	NA	NA
UHGV-0198359_47	PHROG	phrog_3099	NA	unknown function
UHGV-0198359_47	UniRef90	UniRef90_A0A3P6KYP0	Phage capsid family protein	NA
UHGV-0198359_47	eggNOG-mapper	742723.HMPREF9477_00900	NA	NA
UHGV-0198359_47	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0198359_48	PHROG	phrog_4450	NA	unknown function
UHGV-0198359_48	eggNOG-mapper	1280692.AUJL01000004_gene838	NA	NA
UHGV-0198359_48	Pfam	PF20378	NA	DUF6673
UHGV-0198359_48	Structural annotation	PF20378	NA	NA
UHGV-0198359_49	PHROG	phrog_706	NA	unknown function
UHGV-0198359_49	UniRef90	UniRef90_UPI001CD5259B	bacteriophage Gp15 family protein	NA
UHGV-0198359_49	eggNOG-mapper	411460.RUMTOR_02091	COG NOG24969 non supervised orthologous group	NA
UHGV-0198359_49	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0198359_49	Structural annotation	PF06854	NA	NA
UHGV-0198359_50	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-0198359_50	UniRef90	UniRef90_A0A829NQN8	Bro-N domain-containing protein	NA
UHGV-0198359_50	eggNOG-mapper	397290.C810_01420	BRO family, N-terminal domain	NA
UHGV-0198359_50	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0198359_50	COG	COG3617	Prophage antirepressor	NA
UHGV-0198359_50	Structural annotation	PF02498, NF033622, COG3617	NA	NA
UHGV-0198359_51	PHROG	phrog_29609	NA	unknown function
UHGV-0198359_51	UniRef90	UniRef90_A0A1C5UN80	PBECR2 domain-containing protein	NA
UHGV-0198359_51	eggNOG-mapper	1280698.AUJS01000041_gene2531	NA	NA
UHGV-0198359_51	Pfam	PF18810	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
UHGV-0198359_51	Structural annotation	PF18825, COG2929	NA	NA
UHGV-0198359_54	UniRef90	UniRef90_A0A845RC52	CopG family transcriptional regulator	NA
UHGV-0198359_54	Structural annotation	PF01402, COG4710	NA	NA
UHGV-0198359_55	PHROG	phrog_6329	NA	unknown function
UHGV-0198359_55	UniRef90	UniRef90_A0A3Q9BAR3	Phage infection protein	NA
UHGV-0198359_55	eggNOG-mapper	552525.B5LPL4_9CAUD	NA	NA
UHGV-0198359_56	PHROG	phrog_1726	anti-repressor	transcription regulation
UHGV-0198359_56	UniRef90	UniRef90_UPI00156D6AA7	Rha family transcriptional regulator	NA
UHGV-0198359_56	eggNOG-mapper	742738.HMPREF9460_02487	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-0198359_56	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0198359_56	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0198359_56	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0198359_56	Structural annotation	PF09669, TIGR02681, COG3646	NA	NA
UHGV-0198359_59	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-0198359_59	PHROG	phrog_5218	NA	unknown function
UHGV-0198359_59	UniRef90	UniRef90_UPI00156ED04E	phage tail tape measure protein	NA
UHGV-0198359_59	eggNOG-mapper	411460.RUMTOR_02094	Phage-related minor tail protein	NA
UHGV-0198359_59	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0198359_59	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0198359_59	COG	COG4487	NA	NA
UHGV-0198359_59	Structural annotation	PF10145, TIGR01760, NF011901	NA	NA
UHGV-0198359_60	PHROG	phrog_202	distal tail protein Dit	tail
UHGV-0198359_60	UniRef90	UniRef90_UPI001186E767	phage tail family protein	NA
UHGV-0198359_60	eggNOG-mapper	411470.RUMGNA_02229	NA	NA
UHGV-0198359_60	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0198359_60	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0198359_60	COG	COG4722	Phage-related protein YomH	NA
UHGV-0198359_60	Structural annotation	PF05709, PF21708, TIGR01633, NF041449, COG4722, COG3506	NA	NA
UHGV-0198359_61	KOfam	K16617	COL13A; collagen type XIII alpha	NA
UHGV-0198359_61	PHROG	phrog_588	tail fiber protein and host specificity	tail
UHGV-0198359_61	UniRef90	UniRef90_UPI000467D60B	collagen-like protein	NA
UHGV-0198359_61	eggNOG-mapper	411470.RUMGNA_02230	NA	NA
UHGV-0198359_61	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0198359_61	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0198359_61	Pfam	PF21470	Minor structural protein 5-like, C-terminal domain	BppU-like_C
UHGV-0198359_61	Structural annotation	PF14594, PF08931, PF19081, TIGR01665, COG4926	NA	NA
UHGV-0198359_62	PHROG	phrog_1863	NA	unknown function
UHGV-0198359_62	eggNOG-mapper	1232453.BAIF02000059_gene1610	NA	NA
UHGV-0198359_63	PHROG	phrog_1129	holin	lysis
UHGV-0198359_63	UniRef90	UniRef90_UPI00051B7422	phage holin family protein	NA
UHGV-0198359_63	eggNOG-mapper	1232453.BAIF02000013_gene3227	NA	NA
UHGV-0198359_63	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0198359_63	Structural annotation	PF16079	NA	NA
UHGV-0198359_65	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0198359_65	PHROG	phrog_435	endolysin	lysis
UHGV-0198359_65	UniRef90	UniRef90_A0A415SBY0	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0198359_65	eggNOG-mapper	411470.RUMGNA_02814	Ami_3	NA
UHGV-0198359_65	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0198359_65	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0198359_65	Structural annotation	PF01520, MF_00417, TIGR02883, COG0860	NA	NA
UHGV-0198359_67	KOfam	K01582	E4.1.1.18, ldcC, cadA; lysine decarboxylase [EC:4.1.1.18]	NA
UHGV-0198359_67	UniRef90	UniRef90_A0A6N3DBG4	Arginine decarboxylase	NA
UHGV-0198359_67	eggNOG-mapper	411470.RUMGNA_03848	NA	NA
UHGV-0198359_67	Pfam	PF01276	Orn/Lys/Arg decarboxylase, major domain	OKR_DC_1
UHGV-0198359_67	COG	COG1982	Arginine/lysine/ornithine decarboxylase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0198359	Yes	42,150 bps	41.70%	94.26%	0.9802
UHGV-0173004	No	50,215 bps	41.09%	99.90%	0.9793
UHGV-0147796	No	37,597 bps	41.97%	84.21%	0.9767
UHGV-0145932	No	36,922 bps	41.71%	82.90%	0.9785
UHGV-0099203	No	33,942 bps	42.35%	75.67%	0.9823
UHGV-0094661	No	17,459 bps	39.22%	45.14%	0.9779
UHGV-0094516	No	19,542 bps	42.06%	41.95%	0.9814
UHGV-1576544	No	16,220 bps	41.06%	41.62%	0.9809
UHGV-1844862	No	13,086 bps	42.70%	32.68%	0.9782
UHGV-1558084	No	10,056 bps	40.57%	21.57%	0.9576