vOTU-011054

Overview

vOTU representative UHGV-2045911

No. of genomes 3

Genome length 11,080 bps

Completeness 99.90% (high-quality)

Host Bifidobacterium longum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-011054
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00133 › vSUBFAM-02114 › vGENUS-19595 › vSUBGEN-38037 › vOTU-011054
Host taxonomy	Bacteria › Actinobacteriota › Actinomycetia › Actinomycetales › Bifidobacteriaceae › Bifidobacterium › Bifidobacterium longum
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2045911
BioSample	SAMEA2737681
Genome length	11,080 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	13
CDS density	86.94%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2045911_1	PHROG	phrog_10	major head protein	head and packaging
UHGV-2045911_1	UniRef90	UniRef90_UPI000BF393A8	phage major capsid protein	NA
UHGV-2045911_1	eggNOG-mapper	1167632.AJTR01000015_gene1286	Phage capsid family	NA
UHGV-2045911_1	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2045911_1	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2045911_1	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2045911_2	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-2045911_2	UniRef90	UniRef90_UPI00051C0E87	head-tail connector protein	NA
UHGV-2045911_2	eggNOG-mapper	1089548.KI783301_gene3223	NA	NA
UHGV-2045911_2	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-2045911_2	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2045911_3	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2045911_3	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2045911_3	UniRef90	UniRef90_UPI00195C7236	HNH endonuclease	NA
UHGV-2045911_3	eggNOG-mapper	1089548.KI783301_gene3222	HNH endonuclease	NA
UHGV-2045911_3	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2045911_3	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2045911_4	PHROG	phrog_1066	NA	unknown function
UHGV-2045911_4	eggNOG-mapper	1229783.C273_11286	NA	NA
UHGV-2045911_5	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2045911_5	UniRef90	UniRef90_A0A6S6XVL7	Terminase	NA
UHGV-2045911_5	eggNOG-mapper	1089548.KI783301_gene3220	Terminase	NA
UHGV-2045911_5	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2045911_5	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2045911_5	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2045911_5	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2045911_6	UniRef90	UniRef90_G9PTB7	Putative phage head-tail adaptor	NA
UHGV-2045911_6	eggNOG-mapper	457415.HMPREF1006_01810	Phage head-tail joining protein	NA
UHGV-2045911_6	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2045911_8	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-2045911_8	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-2045911_10	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-2045911_10	PHROG	phrog_239	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-2045911_10	UniRef90	UniRef90_UPI001E4444F0	toprim domain-containing protein	NA
UHGV-2045911_10	eggNOG-mapper	1316408.HSISM1_1332	DnaB-like helicase C terminal domain	NA
UHGV-2045911_10	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-2045911_10	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-2045911_10	COG	COG0305	Replicative DNA helicase	NA
UHGV-2045911_10	Structural annotation	PF03796, PF13155, MF_04154, NF005369, TIGR01391, COG0305	NA	NA
UHGV-2045911_11	PHROG	phrog_12	portal protein	head and packaging
UHGV-2045911_11	UniRef90	UniRef90_R6GPW0	HK97 family phage portal protein	NA
UHGV-2045911_11	eggNOG-mapper	1089548.KI783301_gene3227	Phage portal protein	NA
UHGV-2045911_11	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2045911_11	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2045911_11	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2045911_11	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2045911_12	KOfam	K06904	NA	NA
UHGV-2045911_12	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-2045911_12	UniRef90	UniRef90_A0A7T3T3P5	HK97 family phage prohead protease	NA
UHGV-2045911_12	eggNOG-mapper	471855.Shel_08240	Caudovirus prohead serine protease	NA
UHGV-2045911_12	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-2045911_12	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-2045911_12	COG	COG3740	Phage head maturation protease	NA
UHGV-2045911_12	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-2045911_13	PHROG	phrog_10	major head protein	head and packaging
UHGV-2045911_13	UniRef90	UniRef90_UPI001E647B28	phage major capsid protein	NA
UHGV-2045911_13	eggNOG-mapper	1167632.AJTR01000015_gene1286	Phage capsid family	NA
UHGV-2045911_13	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2045911_13	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2045911_13	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2045911_13	Structural annotation	PF05065, TIGR01554, COG4653	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2045911	Yes	11,080 bps	55.35%	99.90%	0.9806
UHGV-0072036	No	11,080 bps	55.38%	99.90%	0.9804
UHGV-0181605	No	11,058 bps	55.36%	99.90%	0.9798