vOTU-011176

Overview

vOTU representative UHGV-0204885

No. of genomes 3

Genome length 39,265 bps

Completeness 99.90% (high-quality)

Host Oscillospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-011176
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00077 › vGENUS-00252 › vSUBGEN-09640 › vOTU-011176
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204885
BioSample	NA
Genome length	39,265 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	65
CDS density	91.65%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204885_2	Structural annotation	PF10651, NF038186	NA	NA
UHGV-0204885_3	PHROG	phrog_31538	NA	unknown function
UHGV-0204885_4	PHROG	phrog_13589	NA	unknown function
UHGV-0204885_4	eggNOG-mapper	428125.CLOLEP_01434	NA	NA
UHGV-0204885_5	eggNOG-mapper	742733.HMPREF9469_05008	NA	NA
UHGV-0204885_6	PHROG	phrog_9915	NA	unknown function
UHGV-0204885_6	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-0204885_6	NCBIFam	TIGR02167.1	bacterial surface protein 26-residue repeat	NA
UHGV-0204885_6	COG	COG1876	LD-carboxypeptidase LdcB, LAS superfamily	NA
UHGV-0204885_7	PHROG	phrog_1863	NA	unknown function
UHGV-0204885_7	eggNOG-mapper	748224.HMPREF9436_01412	NA	NA
UHGV-0204885_8	PHROG	phrog_13256	NA	unknown function
UHGV-0204885_8	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-0204885_10	PHROG	phrog_18955	NA	unknown function
UHGV-0204885_10	UniRef90	UniRef90_UPI00164D2830	phosphodiester glycosidase family protein	NA
UHGV-0204885_10	eggNOG-mapper	696369.KI912183_gene2044	exopolysaccharide biosynthesis protein	NA
UHGV-0204885_10	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-0204885_10	COG	COG4632	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	NA
UHGV-0204885_10	Structural annotation	PF09992, COG4632	NA	NA
UHGV-0204885_11	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-0204885_11	PHROG	phrog_894	endolysin	lysis
UHGV-0204885_11	UniRef90	UniRef90_K1TJK4	Peptidase_M15_3 domain-containing protein (Fragment)	NA
UHGV-0204885_11	eggNOG-mapper	1235797.C816_04171	Peptidase M15	NA
UHGV-0204885_11	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0204885_11	COG	COG3108	NA	NA
UHGV-0204885_11	Structural annotation	PF05951, COG3108	NA	NA
UHGV-0204885_13	eggNOG-mapper	742738.HMPREF9460_04058	NA	NA
UHGV-0204885_14	UniRef90	UniRef90_A0A6N3FXW7	Helix-turn-helix	NA
UHGV-0204885_14	eggNOG-mapper	742738.HMPREF9460_04059	Helix-turn-helix XRE-family like proteins	NA
UHGV-0204885_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204885_14	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0204885_14	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0204885_17	PHROG	phrog_22984	NA	unknown function
UHGV-0204885_18	PHROG	phrog_16490	NA	unknown function
UHGV-0204885_18	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-0204885_19	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0204885_20	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0204885_21	KOfam	K14059	int; integrase	NA
UHGV-0204885_21	PHROG	phrog_1	integrase	integration and excision
UHGV-0204885_21	UniRef90	UniRef90_A0A1H8A220	Site-specific recombinase XerD	NA
UHGV-0204885_21	eggNOG-mapper	693746.OBV_01970	Phage integrase family	NA
UHGV-0204885_21	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0204885_21	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0204885_21	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0204885_21	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0204885_22	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204885_22	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0204885_22	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-0204885_25	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0204885_25	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0204885_25	UniRef90	UniRef90_G4L1F8	Putative Xre family DNA-binding protein	NA
UHGV-0204885_25	eggNOG-mapper	693746.OBV_19770	sequence-specific DNA binding	NA
UHGV-0204885_25	Pfam	PF07022	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
UHGV-0204885_25	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0204885_25	Structural annotation	PF12844, MF_02017, NF041951, COG1396	NA	NA
UHGV-0204885_27	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0204885_27	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204885_27	UniRef90	UniRef90_UPI00030EB95F	helix-turn-helix domain-containing protein	NA
UHGV-0204885_27	eggNOG-mapper	1007096.BAGW01000011_gene2356	sequence-specific DNA binding	NA
UHGV-0204885_27	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204885_27	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0204885_27	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0204885_28	Structural annotation	PF12728, NF040990	NA	NA
UHGV-0204885_29	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0204885_29	UniRef90	UniRef90_UPI001C01DF91	helix-turn-helix transcriptional regulator	NA
UHGV-0204885_29	eggNOG-mapper	1226322.HMPREF1545_00092	Helix-turn-helix XRE-family like proteins	NA
UHGV-0204885_29	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0204885_29	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0204885_29	Structural annotation	PF01381, NF040522, COG1476	NA	NA
UHGV-0204885_30	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0204885_30	UniRef90	UniRef90_UPI001ADEF5BC	helix-turn-helix domain-containing protein	NA
UHGV-0204885_30	eggNOG-mapper	742738.HMPREF9460_00851	Helix-turn-helix domain	NA
UHGV-0204885_30	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0204885_30	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0204885_30	Structural annotation	PF04182, NF040939, COG3355	NA	NA
UHGV-0204885_31	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0204885_31	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0204885_31	UniRef90	UniRef90_UPI001C0112E5	AAA family ATPase	NA
UHGV-0204885_31	eggNOG-mapper	742738.HMPREF9460_00852	Participates in initiation and elongation during chromosome replication	NA
UHGV-0204885_31	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0204885_31	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0204885_31	COG	COG0305	Replicative DNA helicase	NA
UHGV-0204885_31	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0204885_33	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0204885_33	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0204885_33	UniRef90	UniRef90_UPI001BB48231	ParA family protein	NA
UHGV-0204885_33	eggNOG-mapper	693746.OBV_19850	Anion-transporting ATPase	NA
UHGV-0204885_33	Pfam	PF13614	AAA domain	AAA_31
UHGV-0204885_33	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0204885_33	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0204885_34	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0204885_34	PHROG	phrog_27290	NA	unknown function
UHGV-0204885_34	UniRef90	UniRef90_UPI001C029D7C	ParB N-terminal domain-containing protein	NA
UHGV-0204885_34	eggNOG-mapper	742738.HMPREF9460_00856	ParB-like nuclease domain	NA
UHGV-0204885_34	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0204885_34	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0204885_34	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0204885_36	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0204885_36	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0204885_36	UniRef90	UniRef90_UPI001C02B0E9	single-stranded DNA-binding protein	NA
UHGV-0204885_36	eggNOG-mapper	693746.OBV_12860	Single-strand binding protein family	NA
UHGV-0204885_36	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0204885_36	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0204885_36	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0204885_36	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0204885_36	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0204885_37	PHROG	phrog_924	NA	unknown function
UHGV-0204885_37	UniRef90	UniRef90_A0A2V2EEG3	NA	NA
UHGV-0204885_37	Pfam	PF04448	NA	DUF551
UHGV-0204885_37	Structural annotation	PF04448	NA	NA
UHGV-0204885_38	UniRef90	UniRef90_UPI00145A074D	NA	NA
UHGV-0204885_41	PHROG	phrog_474	phosphofructokinase	other
UHGV-0204885_41	UniRef90	UniRef90_A0A2V2EHL9	NA	NA
UHGV-0204885_41	eggNOG-mapper	1203606.HMPREF1526_00237	NA	NA
UHGV-0204885_41	Pfam	PF19905	NA	DUF6378
UHGV-0204885_41	Structural annotation	PF19905	NA	NA
UHGV-0204885_42	PHROG	phrog_924	NA	unknown function
UHGV-0204885_42	UniRef90	UniRef90_A0A3A6ECV8	NA	NA
UHGV-0204885_42	eggNOG-mapper	411470.RUMGNA_00214	NA	NA
UHGV-0204885_42	Pfam	PF04448	NA	DUF551
UHGV-0204885_43	PHROG	phrog_38832	NA	unknown function
UHGV-0204885_43	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-0204885_43	Structural annotation	PF07073	NA	NA
UHGV-0204885_44	PHROG	phrog_22543	NA	unknown function
UHGV-0204885_47	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0204885_47	eggNOG-mapper	693746.OBV_19950	NA	NA
UHGV-0204885_47	Structural annotation	PF05840	NA	NA
UHGV-0204885_48	UniRef90	UniRef90_UPI001D014F8E	cysteine-rich KTR domain-containing protein	NA
UHGV-0204885_48	eggNOG-mapper	1226322.HMPREF1545_00110	Cysteine-rich KTR	NA
UHGV-0204885_48	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-0204885_48	Structural annotation	PF14205	NA	NA
UHGV-0204885_49	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0204885_49	UniRef90	UniRef90_UPI001EDE5545	HNH endonuclease	NA
UHGV-0204885_49	eggNOG-mapper	693746.OBV_19960	HNH endonuclease	NA
UHGV-0204885_49	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0204885_49	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0204885_49	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0204885_50	PHROG	phrog_21498	NA	unknown function
UHGV-0204885_50	UniRef90	UniRef90_C7MM70	ParB-like nuclease	NA
UHGV-0204885_50	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-0204885_50	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0204885_50	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0204885_50	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0204885_50	Structural annotation	PF02195, MF_02015, TIGR04285, TIGR01712, COG1475	NA	NA
UHGV-0204885_51	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0204885_51	UniRef90	UniRef90_UPI001EDE2A13	phage terminase small subunit P27 family	NA
UHGV-0204885_51	eggNOG-mapper	1007096.BAGW01000012_gene2373	Phage terminase, small subunit	NA
UHGV-0204885_51	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0204885_51	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0204885_51	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0204885_51	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0204885_52	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0204885_52	UniRef90	UniRef90_A0A845R4S1	Terminase large subunit	NA
UHGV-0204885_52	eggNOG-mapper	742738.HMPREF9460_00872	Phage Terminase	NA
UHGV-0204885_52	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0204885_52	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0204885_52	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0204885_52	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0204885_54	PHROG	phrog_12	portal protein	head and packaging
UHGV-0204885_54	UniRef90	UniRef90_UPI001958B72F	phage portal protein	NA
UHGV-0204885_54	eggNOG-mapper	1007103.AFHW01000142_gene1297	Phage portal protein	NA
UHGV-0204885_54	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0204885_54	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0204885_54	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0204885_54	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0204885_55	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0204885_55	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0204885_55	UniRef90	UniRef90_UPI00124513AA	Clp protease ClpP	NA
UHGV-0204885_55	eggNOG-mapper	557436.Lreu_1115	Belongs to the peptidase S14 family	NA
UHGV-0204885_55	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0204885_55	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0204885_55	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-0204885_56	PHROG	phrog_10	major head protein	head and packaging
UHGV-0204885_56	UniRef90	UniRef90_UPI001BB4749F	phage major capsid protein	NA
UHGV-0204885_56	eggNOG-mapper	742740.HMPREF9474_04304	Phage capsid family	NA
UHGV-0204885_56	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0204885_56	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0204885_56	Structural annotation	PF05065, PF14182, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0204885_57	UniRef90	UniRef90_UPI001C018007	head-tail connector protein	NA
UHGV-0204885_57	eggNOG-mapper	742738.HMPREF9460_00878	NA	NA
UHGV-0204885_57	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0204885_57	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0204885_58	PHROG	phrog_25	head closure Hc1	connector
UHGV-0204885_58	UniRef90	UniRef90_UPI001898DBDF	phage head closure protein	NA
UHGV-0204885_58	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0204885_58	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0204885_58	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0204885_58	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0204885_59	UniRef90	UniRef90_UPI00102FC317	phage tail protein	NA
UHGV-0204885_59	eggNOG-mapper	1203606.HMPREF1526_00975	NA	NA
UHGV-0204885_59	Structural annotation	PF05657	NA	NA
UHGV-0204885_60	UniRef90	UniRef90_R5IIS5	HK97 gp10 family phage protein	NA
UHGV-0204885_60	eggNOG-mapper	1203606.HMPREF1526_00974	NA	NA
UHGV-0204885_60	Structural annotation	TIGR01725	NA	NA
UHGV-0204885_61	PHROG	phrog_88	major tail protein	tail
UHGV-0204885_61	UniRef90	UniRef90_R5EB96	Phage major tail protein phi13 family	NA
UHGV-0204885_61	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0204885_63	PHROG	phrog_23464	NA	unknown function
UHGV-0204885_63	eggNOG-mapper	33035.JPJF01000023_gene3232	phage tail tape measure protein	NA
UHGV-0204885_63	COG	COG5412	Phage-related protein	NA
UHGV-0204885_63	Structural annotation	TIGR01760, COG5280	NA	NA
UHGV-0204885_65	PHROG	phrog_32744	NA	unknown function
UHGV-0204885_65	eggNOG-mapper	1232449.BAHV02000010_gene2725	NA	NA
UHGV-0204885_65	Structural annotation	PF14594, NF033848, COG4379	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204885	Yes	39,265 bps	59.72%	99.90%	0.9807
UHGV-0186219	No	36,668 bps	59.92%	96.24%	0.9802
UHGV-2166547	No	14,627 bps	62.80%	38.65%	0.9774