vOTU-011432

Overview

vOTU representative UHGV-0197973

No. of genomes 2

Genome length 39,778 bps

Completeness 99.90% (high-quality)

Host Megasphaeraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-011432
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 › vSUBFAM-00314 › vGENUS-18162 › vSUBGEN-34235 › vOTU-011432
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Megasphaeraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0197973
BioSample	SAMN00792054
Genome length	39,778 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	62
CDS density	92.01%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0197973_1	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0197973_1	PHROG	phrog_95	integrase	integration and excision
UHGV-0197973_1	UniRef90	UniRef90_UPI0008A8C8AE	recombinase family protein	NA
UHGV-0197973_1	eggNOG-mapper	706434.HMPREF9429_00560	overlaps another CDS with the same product name	NA
UHGV-0197973_1	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0197973_1	Pfam	PF07508	Recombinase	Recombinase
UHGV-0197973_1	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0197973_1	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0197973_1	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-0197973_3	PHROG	phrog_10226	NA	unknown function
UHGV-0197973_3	eggNOG-mapper	1121091.AUMP01000069_gene1397	Restriction endonuclease	NA
UHGV-0197973_3	COG	COG1715	Restriction endonuclease Mrr	NA
UHGV-0197973_3	Structural annotation	PF01878, COG4127	NA	NA
UHGV-0197973_4	UniRef90	UniRef90_G0VPB1	Prophage LambdaCh01	NA
UHGV-0197973_4	eggNOG-mapper	1273103.NM10_02427	competence protein COMEC	NA
UHGV-0197973_4	COG	COG2333	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	NA
UHGV-0197973_4	Structural annotation	PF02805	NA	NA
UHGV-0197973_5	eggNOG-mapper	742743.HMPREF9453_01875	NA	NA
UHGV-0197973_6	eggNOG-mapper	592028.GCWU000321_01101	NA	NA
UHGV-0197973_7	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0197973_7	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0197973_7	UniRef90	UniRef90_UPI0008E976B1	helix-turn-helix domain-containing protein	NA
UHGV-0197973_7	eggNOG-mapper	1120998.AUFC01000030_gene2204	Helix-turn-helix XRE-family like proteins	NA
UHGV-0197973_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0197973_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0197973_8	UniRef90	UniRef90_UPI0008E110CC	helix-turn-helix transcriptional regulator	NA
UHGV-0197973_8	eggNOG-mapper	1540257.JQMW01000013_gene774	NA	NA
UHGV-0197973_8	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0197973_8	Structural annotation	PF05339, NF041951, COG1396	NA	NA
UHGV-0197973_11	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0197973_11	UniRef90	UniRef90_A0A2S0M9E4	HNH endonuclease	NA
UHGV-0197973_11	eggNOG-mapper	585503.HMPREF7545_1722	HNH endonuclease	NA
UHGV-0197973_11	Pfam	PF14279	HNH endonuclease	HNH_5
UHGV-0197973_11	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0197973_12	PHROG	phrog_1672	NA	unknown function
UHGV-0197973_12	UniRef90	UniRef90_S7HT72	NA	NA
UHGV-0197973_16	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0197973_16	eggNOG-mapper	592028.GCWU000321_01357	NA	NA
UHGV-0197973_18	PHROG	phrog_8470	NA	unknown function
UHGV-0197973_18	UniRef90	UniRef90_UPI00073F3B84	PcfJ domain-containing protein	NA
UHGV-0197973_18	eggNOG-mapper	717606.PaecuDRAFT_3105	PcfJ-like protein	NA
UHGV-0197973_18	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0197973_19	PHROG	phrog_15609	NA	unknown function
UHGV-0197973_19	UniRef90	UniRef90_UPI00073F64A5	NA	NA
UHGV-0197973_19	eggNOG-mapper	1232428.CAVO010000003_gene1018	NA	NA
UHGV-0197973_19	Pfam	PF11300	NA	DUF3102
UHGV-0197973_19	COG	COG0188	DNA gyrase/topoisomerase IV, subunit A	NA
UHGV-0197973_19	Structural annotation	PF11300, NF038070	NA	NA
UHGV-0197973_21	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0197973_21	eggNOG-mapper	1232428.CAVO010000003_gene1017	NA	NA
UHGV-0197973_21	Structural annotation	PF21578	NA	NA
UHGV-0197973_22	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0197973_22	UniRef90	UniRef90_UPI000930BD90	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0197973_22	eggNOG-mapper	1226322.HMPREF1545_04070	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	NA
UHGV-0197973_22	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0197973_22	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0197973_24	PHROG	phrog_32878	NA	unknown function
UHGV-0197973_24	Pfam	PF04448	NA	DUF551
UHGV-0197973_24	Structural annotation	NF041588	NA	NA
UHGV-0197973_25	PHROG	phrog_37395	NA	unknown function
UHGV-0197973_27	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0197973_27	UniRef90	UniRef90_U7ULD4	PF07374 family protein	NA
UHGV-0197973_27	eggNOG-mapper	1111454.HMPREF1250_1040	NA	NA
UHGV-0197973_27	Pfam	PF07374	NA	DUF1492
UHGV-0197973_27	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-0197973_28	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0197973_28	UniRef90	UniRef90_A0A356UL78	HNH domain-containing protein	NA
UHGV-0197973_28	eggNOG-mapper	1089548.KI783301_gene3222	HNH endonuclease	NA
UHGV-0197973_28	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0197973_28	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0197973_29	PHROG	phrog_1066	NA	unknown function
UHGV-0197973_29	UniRef90	UniRef90_A0A2K4DHE9	NA	NA
UHGV-0197973_29	eggNOG-mapper	1232428.CAVO010000003_gene1013	NA	NA
UHGV-0197973_29	Structural annotation	PF05119, TIGR01558	NA	NA
UHGV-0197973_30	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0197973_30	UniRef90	UniRef90_UPI00164586AB	terminase large subunit	NA
UHGV-0197973_30	eggNOG-mapper	1232428.CAVO010000003_gene1012	Phage Terminase	NA
UHGV-0197973_30	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0197973_30	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0197973_30	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0197973_30	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0197973_31	PHROG	phrog_12	portal protein	head and packaging
UHGV-0197973_31	UniRef90	UniRef90_A0A412CHK9	Phage portal protein	NA
UHGV-0197973_31	eggNOG-mapper	1232428.CAVO010000003_gene1011	Phage portal protein	NA
UHGV-0197973_31	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0197973_31	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0197973_31	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0197973_31	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0197973_32	KOfam	K06904	NA	NA
UHGV-0197973_32	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0197973_32	UniRef90	UniRef90_A0A412CHQ0	HK97 family phage prohead protease	NA
UHGV-0197973_32	eggNOG-mapper	1232428.CAVO010000003_gene1010	Caudovirus prohead serine protease	NA
UHGV-0197973_32	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0197973_32	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0197973_32	COG	COG3740	Phage head maturation protease	NA
UHGV-0197973_32	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0197973_33	PHROG	phrog_10	major head protein	head and packaging
UHGV-0197973_33	UniRef90	UniRef90_A0A412CI12	Phage major capsid protein	NA
UHGV-0197973_33	eggNOG-mapper	1341151.ASZU01000004_gene260	Phage capsid family	NA
UHGV-0197973_33	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0197973_33	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0197973_33	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0197973_33	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0197973_34	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0197973_34	UniRef90	UniRef90_A0A412CHC9	Phage gp6-like head-tail connector protein	NA
UHGV-0197973_34	eggNOG-mapper	66692.ABC1335	Phage gp6-like head-tail connector protein	NA
UHGV-0197973_34	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0197973_34	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0197973_34	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0197973_35	PHROG	phrog_25	head closure Hc1	connector
UHGV-0197973_35	UniRef90	UniRef90_UPI001648A1FB	phage head closure protein	NA
UHGV-0197973_35	eggNOG-mapper	1232428.CAVO010000003_gene1007	Phage head-tail joining protein	NA
UHGV-0197973_35	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0197973_35	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0197973_35	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0197973_35	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0197973_36	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0197973_36	UniRef90	UniRef90_UPI001645C731	HK97 gp10 family phage protein	NA
UHGV-0197973_36	eggNOG-mapper	1232428.CAVO010000003_gene1006	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0197973_36	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0197973_36	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0197973_37	PHROG	phrog_525	NA	unknown function
UHGV-0197973_37	Pfam	PF20765	NA	DUF6838
UHGV-0197973_37	Structural annotation	PF20765, COG5003	NA	NA
UHGV-0197973_38	PHROG	phrog_1480	tail sheath	tail
UHGV-0197973_38	UniRef90	UniRef90_UPI0016491346	phage tail sheath subtilisin-like domain-containing protein	NA
UHGV-0197973_38	eggNOG-mapper	1232428.CAVO010000003_gene1004	Phage tail sheath C-terminal domain	NA
UHGV-0197973_38	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-0197973_38	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0197973_38	Structural annotation	PF10758, COG3497	NA	NA
UHGV-0197973_39	PHROG	phrog_365	tail protein	tail
UHGV-0197973_39	UniRef90	UniRef90_A0A2S0M4K4	Phage portal protein	NA
UHGV-0197973_39	eggNOG-mapper	1232428.CAVO010000003_gene1003	Phage tail tube protein	NA
UHGV-0197973_39	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0197973_39	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-0197973_40	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-0197973_40	UniRef90	UniRef90_A0A3N1XNY1	XkdN-like tail assembly chaperone	NA
UHGV-0197973_40	eggNOG-mapper	1232428.CAVO010000003_gene1002	Phage XkdN-like tail assembly chaperone protein, TAC	NA
UHGV-0197973_40	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-0197973_40	Structural annotation	PF08890	NA	NA
UHGV-0197973_41	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0197973_41	UniRef90	UniRef90_UPI001645A310	phage tail tape measure protein	NA
UHGV-0197973_41	eggNOG-mapper	1232428.CAVO010000003_gene1001	Phage-related minor tail protein	NA
UHGV-0197973_41	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0197973_41	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0197973_41	COG	COG5283	Phage-related tail protein	NA
UHGV-0197973_41	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0197973_42	PHROG	phrog_5184	NA	unknown function
UHGV-0197973_42	UniRef90	UniRef90_I0GWS0	Phage related protein	NA
UHGV-0197973_42	eggNOG-mapper	1232428.CAVO010000003_gene1000	LysM domain	NA
UHGV-0197973_42	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0197973_42	Structural annotation	PF19266, TIGR02126, COG3499	NA	NA
UHGV-0197973_43	PHROG	phrog_400	tail protein	tail
UHGV-0197973_43	UniRef90	UniRef90_A0A848BXY8	Lytic transglycosylase domain-containing protein	NA
UHGV-0197973_43	eggNOG-mapper	568816.Acin_1962	NLP P60 protein	NA
UHGV-0197973_43	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0197973_43	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0197973_44	PHROG	phrog_579	NA	unknown function
UHGV-0197973_44	UniRef90	UniRef90_A0A848C3I7	NA	NA
UHGV-0197973_44	eggNOG-mapper	1123250.KB908414_gene2116	NA	NA
UHGV-0197973_44	Pfam	PF10844	NA	DUF2577
UHGV-0197973_44	Structural annotation	PF10844, TIGR00523	NA	NA
UHGV-0197973_45	PHROG	phrog_120	baseplate protein	tail
UHGV-0197973_45	UniRef90	UniRef90_A0A2S0M4I9	NA	NA
UHGV-0197973_45	eggNOG-mapper	1232428.CAVO010000003_gene997	NA	NA
UHGV-0197973_45	Pfam	PF10934	NA	DUF2634
UHGV-0197973_45	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0197973_45	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628	NA	NA
UHGV-0197973_46	PHROG	phrog_6	baseplate protein	tail
UHGV-0197973_46	UniRef90	UniRef90_A0A848BRV6	Baseplate J/gp47 family protein	NA
UHGV-0197973_46	eggNOG-mapper	1273103.NM10_00999	Baseplate J-like protein	NA
UHGV-0197973_46	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0197973_46	COG	COG3299	NA	NA
UHGV-0197973_46	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0197973_47	PHROG	phrog_521	tail protein	tail
UHGV-0197973_47	UniRef90	UniRef90_A0A848EVX3	NA	NA
UHGV-0197973_47	eggNOG-mapper	1273103.NM10_00994	NA	NA
UHGV-0197973_47	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0197973_47	COG	COG3778	NA	NA
UHGV-0197973_47	Structural annotation	PF10076, COG3778	NA	NA
UHGV-0197973_48	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0197973_48	UniRef90	UniRef90_UPI000486D8B9	phage tail protein	NA
UHGV-0197973_48	eggNOG-mapper	1273103.NM10_08074	Phage tail-collar fibre protein	NA
UHGV-0197973_48	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-0197973_48	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0197973_48	Structural annotation	PF12571	NA	NA
UHGV-0197973_49	eggNOG-mapper	1273103.NM10_08079	NA	NA
UHGV-0197973_50	PHROG	phrog_26941	tail protein	tail
UHGV-0197973_50	eggNOG-mapper	679935.Alfi_2723	exo-alpha-(2->6)-sialidase activity	NA
UHGV-0197973_50	COG	COG4409	Neuraminidase (sialidase) NanH, contains C-terminal autotransporter domain	NA
UHGV-0197973_51	PHROG	phrog_31660	tail fiber protein	tail
UHGV-0197973_51	UniRef90	UniRef90_A0A1G9QX40	Mtd_N domain-containing protein	NA
UHGV-0197973_51	eggNOG-mapper	1306174.JODP01000006_gene3223	NA	NA
UHGV-0197973_51	Pfam	PF18454	Major tropism determinant N-terminal domain	Mtd_N
UHGV-0197973_51	Structural annotation	PF18454	NA	NA
UHGV-0197973_52	eggNOG-mapper	1273103.NM10_08099	NA	NA
UHGV-0197973_52	Structural annotation	NF012201	NA	NA
UHGV-0197973_53	KOfam	K14059	int; integrase	NA
UHGV-0197973_53	PHROG	phrog_1	integrase	integration and excision
UHGV-0197973_53	UniRef90	UniRef90_A0A1G5VJA4	Site-specific recombinase XerD	NA
UHGV-0197973_53	eggNOG-mapper	1273103.NM10_01678	Phage integrase family	NA
UHGV-0197973_53	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0197973_53	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0197973_53	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0197973_55	PHROG	phrog_872	NA	unknown function
UHGV-0197973_55	UniRef90	UniRef90_A0A414P7V9	NA	NA
UHGV-0197973_55	eggNOG-mapper	1134413.ANNK01000120_gene2028	NA	NA
UHGV-0197973_55	Pfam	PF11195	NA	DUF2829
UHGV-0197973_55	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-0197973_55	Structural annotation	PF11195	NA	NA
UHGV-0197973_57	PHROG	phrog_1863	NA	unknown function
UHGV-0197973_58	eggNOG-mapper	1273103.NM10_01736	NA	NA
UHGV-0197973_59	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0197973_59	PHROG	phrog_435	endolysin	lysis
UHGV-0197973_59	UniRef90	UniRef90_A0A413QUB9	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0197973_59	eggNOG-mapper	1064535.MELS_1119	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0197973_59	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0197973_59	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0197973_59	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0197973_60	PHROG	phrog_18996	NA	unknown function
UHGV-0197973_60	eggNOG-mapper	864563.HMPREF9166_1229	NA	NA
UHGV-0197973_61	PHROG	phrog_2655	excisionase	integration and excision
UHGV-0197973_61	UniRef90	UniRef90_UPI0009356454	helix-turn-helix domain-containing protein	NA
UHGV-0197973_61	eggNOG-mapper	1401067.HMPREF0872_03330	NA	NA
UHGV-0197973_61	Pfam	PF20038	Helix-turn-helix domain	HTH_59
UHGV-0197973_61	Structural annotation	PF20038, TIGR01764	NA	NA
UHGV-0197973_62	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0197973_62	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0197973	Yes	39,778 bps	45.13%	99.90%	0.9730
UHGV-0123179	No	34,228 bps	45.28%	94.90%	0.9736