vOTU-011478

Overview

vOTU representative UHGV-0200445

No. of genomes 2

Genome length 35,867 bps

Completeness 99.90% (high-quality)

Host Veillonella parvula A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-011478
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 › vSUBFAM-00063 › vGENUS-00033 › vSUBGEN-01362 › vOTU-011478
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Veillonellaceae › Veillonella › Veillonella parvula A
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0200445
BioSample	NA
Genome length	35,867 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	53
CDS density	95.49%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0200445_3	COG	COG2165	Type II secretory pathway, pseudopilin PulG	NA
UHGV-0200445_4	KOfam	K02654	pilD, pppA; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]	NA
UHGV-0200445_4	UniRef90	UniRef90_A0A811GGS9	Peptidase_A24 domain-containing protein	NA
UHGV-0200445_4	eggNOG-mapper	479436.Vpar_1081	aspartic-type endopeptidase activity	NA
UHGV-0200445_4	Pfam	PF01478	Type IV leader peptidase family	Peptidase_A24
UHGV-0200445_4	COG	COG1989	Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase	NA
UHGV-0200445_5	UniRef90	UniRef90_W1XAK8	Type II secretory pathway pseudopilin PulG-like protein (Fragment)	NA
UHGV-0200445_5	eggNOG-mapper	479436.Vpar_1082	General secretion pathway protein	NA
UHGV-0200445_5	COG	COG2165	Type II secretory pathway, pseudopilin PulG	NA
UHGV-0200445_7	PHROG	phrog_10797	NA	unknown function
UHGV-0200445_7	UniRef90	UniRef90_UPI0018C518C1	glycoprotease	NA
UHGV-0200445_7	eggNOG-mapper	883156.HMPREF9282_01266	NA	NA
UHGV-0200445_7	Structural annotation	PF06531	NA	NA
UHGV-0200445_8	KOfam	K07273	acm; lysozyme	NA
UHGV-0200445_8	PHROG	phrog_6745	endolysin	lysis
UHGV-0200445_8	UniRef90	UniRef90_UPI001D0872FD	glycosyl hydrolase family 25	NA
UHGV-0200445_8	eggNOG-mapper	910314.HMPREF9220_0603	Glycosyl hydrolases family 25	NA
UHGV-0200445_8	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0200445_8	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0200445_8	Structural annotation	PF01183, NF008377, COG3757	NA	NA
UHGV-0200445_9	PHROG	phrog_199	holin	lysis
UHGV-0200445_9	UniRef90	UniRef90_UPI000E74DE8A	phage holin family protein	NA
UHGV-0200445_9	eggNOG-mapper	883156.HMPREF9282_00970	Bacteriophage holin family	NA
UHGV-0200445_9	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0200445_9	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0200445_10	PHROG	phrog_9854	NA	unknown function
UHGV-0200445_10	UniRef90	UniRef90_UPI000E7651BD	phage tail tip lysozyme	NA
UHGV-0200445_10	eggNOG-mapper	401526.TcarDRAFT_1293	protein secretion by the type IV secretion system	NA
UHGV-0200445_10	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0200445_10	Pfam	PF18857	Large polyvalent protein associated domain 38	LPD38
UHGV-0200445_10	COG	COG0503	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	NA
UHGV-0200445_10	Structural annotation	PF18857, PF18013	NA	NA
UHGV-0200445_12	UniRef90	UniRef90_UPI001D07B8A4	Hint domain-containing protein	NA
UHGV-0200445_12	eggNOG-mapper	1123288.SOV_4c02760	NA	NA
UHGV-0200445_12	Pfam	PF13403	Hint domain	Hint_2
UHGV-0200445_12	Structural annotation	PF07591, NF038136, TIGR03017, COG4942	NA	NA
UHGV-0200445_13	Structural annotation	PF11039, MF_00084, NF000482, COG3818	NA	NA
UHGV-0200445_15	Structural annotation	PF20747	NA	NA
UHGV-0200445_16	eggNOG-mapper	1485543.JMME01000005_gene872	NA	NA
UHGV-0200445_16	Structural annotation	PF11134, MF_00923, NF000022, COG4257	NA	NA
UHGV-0200445_17	Structural annotation	PF20387	NA	NA
UHGV-0200445_18	Structural annotation	PF20387	NA	NA
UHGV-0200445_19	PHROG	phrog_334	major head protein	head and packaging
UHGV-0200445_19	UniRef90	UniRef90_UPI000E723A53	N4-gp56 family major capsid protein	NA
UHGV-0200445_19	eggNOG-mapper	401526.TcarDRAFT_1286	NA	NA
UHGV-0200445_19	Pfam	PF13252	NA	DUF4043
UHGV-0200445_19	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0200445_19	Structural annotation	PF13252, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0200445_21	PHROG	phrog_156	portal protein	head and packaging
UHGV-0200445_21	UniRef90	UniRef90_F7NK66	Putative phage portal protein	NA
UHGV-0200445_21	eggNOG-mapper	401526.TcarDRAFT_1284	Tfp pilus assembly protein FimV	NA
UHGV-0200445_21	Pfam	PF16510	Phage P22-like portal protein	P22_portal
UHGV-0200445_21	COG	COG3170	Type IV pilus assembly protein FimV	NA
UHGV-0200445_21	Structural annotation	PF16510, MF_04120, TIGR01538, COG4383	NA	NA
UHGV-0200445_23	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0200445_23	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0200445_23	UniRef90	UniRef90_UPI001D073785	phage terminase large subunit	NA
UHGV-0200445_23	eggNOG-mapper	401526.TcarDRAFT_1283	Phage terminase large subunit (GpA)	NA
UHGV-0200445_23	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0200445_23	COG	COG1783	Phage terminase large subunit	NA
UHGV-0200445_23	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0200445_24	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0200445_24	UniRef90	UniRef90_UPI001B3C9B19	helix-turn-helix domain-containing protein	NA
UHGV-0200445_24	eggNOG-mapper	1416334.X2CXN2_9CAUD	endonuclease activity	NA
UHGV-0200445_24	Structural annotation	PF07141	NA	NA
UHGV-0200445_26	UniRef90	UniRef90_A0A847PRP4	Helix-turn-helix transcriptional regulator	NA
UHGV-0200445_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0200445_26	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0200445_26	Structural annotation	PF01381, NF040522, COG2944	NA	NA
UHGV-0200445_28	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0200445_28	UniRef90	UniRef90_A0A6N2ZMD2	Sigma-70, region 4	NA
UHGV-0200445_28	eggNOG-mapper	706434.HMPREF9429_00383	NA	NA
UHGV-0200445_28	Structural annotation	PF07374, TIGR01636	NA	NA
UHGV-0200445_29	PHROG	phrog_3878	NA	unknown function
UHGV-0200445_30	PHROG	phrog_774	NA	unknown function
UHGV-0200445_30	eggNOG-mapper	1435051.BMOU_0242	Helix-turn-helix domain	NA
UHGV-0200445_30	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-0200445_31	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0200445_31	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0200445_31	UniRef90	UniRef90_UPI001D07D29E	dUTP diphosphatase	NA
UHGV-0200445_31	eggNOG-mapper	66692.ABC2847	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA
UHGV-0200445_31	Pfam	PF00692	dUTPase	dUTPase
UHGV-0200445_31	NCBIFam	TIGR00576.1	dUTP diphosphatase	NA
UHGV-0200445_31	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0200445_31	Structural annotation	PF00692, MF_00116, TIGR00576, COG0756	NA	NA
UHGV-0200445_32	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0200445_32	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0200445_32	UniRef90	UniRef90_UPI001D065A38	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0200445_32	eggNOG-mapper	1273103.NM10_01114	Endodeoxyribonuclease RusA	NA
UHGV-0200445_32	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0200445_32	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0200445_33	PHROG	phrog_21026	NA	unknown function
UHGV-0200445_35	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0200445_35	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0200445_35	UniRef90	UniRef90_E4L8C0	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0200445_35	eggNOG-mapper	910314.HMPREF9220_1103	C-5 cytosine-specific DNA methylase	NA
UHGV-0200445_35	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0200445_35	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0200445_35	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0200445_35	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0200445_35	Structural annotation	PF00145, MF_00786, TIGR00675, COG0270	NA	NA
UHGV-0200445_37	Structural annotation	PF11305, MF_01360	NA	NA
UHGV-0200445_38	PHROG	phrog_954	DNA methyltransferase	other
UHGV-0200445_38	UniRef90	UniRef90_UPI001D071710	class I SAM-dependent methyltransferase	NA
UHGV-0200445_38	eggNOG-mapper	1401067.HMPREF0872_03435	methyltransferase	NA
UHGV-0200445_38	PADLOC	MTase_II_00074	Type II methyltransferase	RM
UHGV-0200445_38	Pfam	PF08241	Methyltransferase domain	Methyltransf_11
UHGV-0200445_38	COG	COG0500	SAM-dependent methyltransferase	NA
UHGV-0200445_38	Structural annotation	PF01170, MF_01057, TIGR00446, COG4123	NA	NA
UHGV-0200445_40	PHROG	phrog_1672	NA	unknown function
UHGV-0200445_40	UniRef90	UniRef90_F5L204	Conserved domain protein	NA
UHGV-0200445_41	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0200445_41	PHROG	phrog_38620	transcriptional regulator	transcription regulation
UHGV-0200445_41	UniRef90	UniRef90_UPI00177DA212	helix-turn-helix transcriptional regulator	NA
UHGV-0200445_41	eggNOG-mapper	1114972.AUAW01000005_gene264	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0200445_41	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0200445_42	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0200445_42	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0200445_42	UniRef90	UniRef90_UPI0019613F2D	single-stranded DNA-binding protein	NA
UHGV-0200445_42	eggNOG-mapper	936589.HMPREF1521_1228	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0200445_42	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0200445_42	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0200445_42	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0200445_42	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0200445_42	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0200445_43	PHROG	phrog_5070	NA	unknown function
UHGV-0200445_43	UniRef90	UniRef90_C6L9Y5	Bacterial transferase hexapeptide repeat protein	NA
UHGV-0200445_43	eggNOG-mapper	887929.HMP0721_1276	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0200445_43	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-0200445_44	PHROG	phrog_9804	NA	unknown function
UHGV-0200445_44	UniRef90	UniRef90_W9E7Y7	Inhibitor_G39P domain-containing protein	NA
UHGV-0200445_44	eggNOG-mapper	1094508.Tsac_2439	Loader and inhibitor of phage G40P	NA
UHGV-0200445_45	PHROG	phrog_1163	NA	unknown function
UHGV-0200445_45	UniRef90	UniRef90_UPI001D075DB7	conserved phage C-terminal domain-containing protein	NA
UHGV-0200445_45	eggNOG-mapper	372457.A7DYC7_9CAUD	calcium ion binding	NA
UHGV-0200445_45	Pfam	PF09524	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
UHGV-0200445_45	NCBIFam	TIGR02220.1	phage conserved hypothetical protein, C-terminal domain	NA
UHGV-0200445_45	Structural annotation	PF09524, PF09681, TIGR02220, TIGR01714	NA	NA
UHGV-0200445_46	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0200445_46	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0200445_46	UniRef90	UniRef90_UPI001D092C21	HNH endonuclease	NA
UHGV-0200445_46	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0200445_46	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0200445_46	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0200445_47	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0200445_47	UniRef90	UniRef90_R5BGH3	Conserved domain protein	NA
UHGV-0200445_47	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0200445_48	PHROG	phrog_14970	NA	unknown function
UHGV-0200445_48	UniRef90	UniRef90_A0A1C5NV07	DNA damage response protein A	NA
UHGV-0200445_48	eggNOG-mapper	428127.EUBDOL_01248	double-strand break repair protein	NA
UHGV-0200445_48	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0200445_48	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0200445_49	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0200445_49	UniRef90	UniRef90_UPI001D06B209	siphovirus Gp157 family protein	NA
UHGV-0200445_49	eggNOG-mapper	1226322.HMPREF1545_04074	Siphovirus Gp157	NA
UHGV-0200445_49	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0200445_49	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0200445_51	Structural annotation	NF007883	NA	NA
UHGV-0200445_52	PHROG	phrog_7735	excisionase	integration and excision
UHGV-0200445_52	UniRef90	UniRef90_UPI00195FD229	helix-turn-helix domain-containing protein	NA
UHGV-0200445_52	eggNOG-mapper	862517.HMPREF9225_0695	NA	NA
UHGV-0200445_52	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0200445_52	Structural annotation	PF12728, NF033787, COG3311	NA	NA
UHGV-0200445_53	UniRef90	UniRef90_UPI000E713103	helix-turn-helix transcriptional regulator	NA
UHGV-0200445_53	eggNOG-mapper	1304866.K413DRAFT_0834	PFAM helix-turn-helix domain protein	NA
UHGV-0200445_53	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0200445_53	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0200445_53	Structural annotation	PF01381, NF041951, COG1396	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0200445	Yes	35,867 bps	38.78%	99.90%	0.9748
UHGV-0143119	No	39,512 bps	38.44%	99.90%	0.9732