vOTU-011529

Overview

vOTU representative UHGV-1955298

No. of genomes 3

Genome length 36,696 bps

Completeness 96.42% (high-quality)

Host Oscillospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-011529
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00077 › vGENUS-00252 › vSUBGEN-09169 › vOTU-011529
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1955298
BioSample	NA
Genome length	36,696 bps
CheckV completeness	96.42% (high-quality)
CheckV contamination	0.00%
CDS count	58
CDS density	91.10%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1955298_1	KOfam	K00046	idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]	NA
UHGV-1955298_1	PHROG	phrog_3142	FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1955298_1	UniRef90	UniRef90_A0A173ZRL1	Gluconate 5-dehydrogenase	NA
UHGV-1955298_1	eggNOG-mapper	718252.FP2_23260	NA	NA
UHGV-1955298_1	Pfam	PF00106	short chain dehydrogenase	adh_short
UHGV-1955298_1	COG	COG1028	NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family	NA
UHGV-1955298_2	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1955298_2	UniRef90	UniRef90_A0A8J6J4M6	Terminase	NA
UHGV-1955298_2	eggNOG-mapper	742738.HMPREF9460_00872	Phage Terminase	NA
UHGV-1955298_2	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1955298_2	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1955298_3	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-1955298_3	UniRef90	UniRef90_UPI001EDE2A13	phage terminase small subunit P27 family	NA
UHGV-1955298_3	eggNOG-mapper	1007096.BAGW01000012_gene2373	Phage terminase, small subunit	NA
UHGV-1955298_3	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1955298_3	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-1955298_3	COG	COG3747	Phage terminase, small subunit	NA
UHGV-1955298_3	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1955298_4	PHROG	phrog_21498	NA	unknown function
UHGV-1955298_4	UniRef90	UniRef90_C7MM70	ParB-like nuclease	NA
UHGV-1955298_4	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-1955298_4	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1955298_4	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1955298_4	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1955298_4	Structural annotation	PF02195, PF05869, MF_02015, TIGR00180, TIGR01712, COG1475	NA	NA
UHGV-1955298_5	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1955298_5	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1955298_5	UniRef90	UniRef90_UPI001EDE5545	HNH endonuclease	NA
UHGV-1955298_5	eggNOG-mapper	693746.OBV_19960	HNH endonuclease	NA
UHGV-1955298_5	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1955298_5	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1955298_5	Structural annotation	PF01844, COG1403	NA	NA
UHGV-1955298_6	UniRef90	UniRef90_UPI001F232519	cysteine-rich KTR domain-containing protein	NA
UHGV-1955298_6	eggNOG-mapper	1226322.HMPREF1545_00110	Cysteine-rich KTR	NA
UHGV-1955298_6	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-1955298_6	Structural annotation	PF14205	NA	NA
UHGV-1955298_7	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1955298_7	eggNOG-mapper	693746.OBV_19950	NA	NA
UHGV-1955298_7	Structural annotation	PF21578	NA	NA
UHGV-1955298_10	PHROG	phrog_3136	NA	unknown function
UHGV-1955298_10	UniRef90	UniRef90_UPI001CBCD733	ASCH domain-containing protein	NA
UHGV-1955298_10	eggNOG-mapper	394503.Ccel_3165	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-1955298_10	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-1955298_10	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-1955298_12	Structural annotation	PF06657	NA	NA
UHGV-1955298_14	PHROG	phrog_7704	NA	unknown function
UHGV-1955298_14	UniRef90	UniRef90_A0A2V2EEG3	NA	NA
UHGV-1955298_14	Pfam	PF04448	NA	DUF551
UHGV-1955298_14	Structural annotation	NF041588	NA	NA
UHGV-1955298_15	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1955298_15	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1955298_15	UniRef90	UniRef90_UPI001C02B0E9	single-stranded DNA-binding protein	NA
UHGV-1955298_15	eggNOG-mapper	1519439.JPJG01000082_gene432	Single-strand binding protein family	NA
UHGV-1955298_15	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1955298_15	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1955298_15	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1955298_15	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1955298_15	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1955298_18	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-1955298_18	PHROG	phrog_27290	NA	unknown function
UHGV-1955298_18	UniRef90	UniRef90_UPI001C029D7C	ParB N-terminal domain-containing protein	NA
UHGV-1955298_18	eggNOG-mapper	742738.HMPREF9460_00856	ParB-like nuclease domain	NA
UHGV-1955298_18	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1955298_18	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-1955298_18	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-1955298_19	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-1955298_19	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-1955298_19	UniRef90	UniRef90_UPI001C0253FB	ParA family protein	NA
UHGV-1955298_19	eggNOG-mapper	1007096.BAGW01000033_gene1614	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-1955298_19	Pfam	PF13614	AAA domain	AAA_31
UHGV-1955298_19	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-1955298_19	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-1955298_21	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-1955298_21	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-1955298_21	UniRef90	UniRef90_UPI001C0112E5	AAA family ATPase	NA
UHGV-1955298_21	eggNOG-mapper	742738.HMPREF9460_00852	Participates in initiation and elongation during chromosome replication	NA
UHGV-1955298_21	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-1955298_21	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1955298_21	COG	COG0305	Replicative DNA helicase	NA
UHGV-1955298_21	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-1955298_22	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1955298_22	UniRef90	UniRef90_UPI001ADEF5BC	helix-turn-helix domain-containing protein	NA
UHGV-1955298_22	eggNOG-mapper	742738.HMPREF9460_00851	Helix-turn-helix domain	NA
UHGV-1955298_22	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-1955298_22	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1955298_22	Structural annotation	PF04182, NF040939, COG3355	NA	NA
UHGV-1955298_23	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-1955298_23	UniRef90	UniRef90_UPI001C01DF91	helix-turn-helix transcriptional regulator	NA
UHGV-1955298_23	eggNOG-mapper	1226322.HMPREF1545_00092	Helix-turn-helix XRE-family like proteins	NA
UHGV-1955298_23	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-1955298_23	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-1955298_23	Structural annotation	PF01381, NF040522, COG1476	NA	NA
UHGV-1955298_24	eggNOG-mapper	1235835.C814_03153	NA	NA
UHGV-1955298_24	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-1955298_25	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-1955298_25	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1955298_25	UniRef90	UniRef90_UPI00030EB95F	helix-turn-helix domain-containing protein	NA
UHGV-1955298_25	eggNOG-mapper	1007096.BAGW01000011_gene2356	sequence-specific DNA binding	NA
UHGV-1955298_25	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1955298_25	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-1955298_25	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-1955298_26	UniRef90	UniRef90_UPI001E54DE4F	helix-turn-helix domain-containing protein	NA
UHGV-1955298_26	eggNOG-mapper	1226322.HMPREF1545_00148	Transcriptional	NA
UHGV-1955298_26	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1955298_26	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-1955298_28	eggNOG-mapper	742741.HMPREF9475_00398	NA	NA
UHGV-1955298_29	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1955298_29	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-1955298_30	KOfam	K14059	int; integrase	NA
UHGV-1955298_30	PHROG	phrog_1	integrase	integration and excision
UHGV-1955298_30	UniRef90	UniRef90_G4L0W3	Tyr recombinase domain-containing protein	NA
UHGV-1955298_30	eggNOG-mapper	693746.OBV_43340	Belongs to the 'phage' integrase family	NA
UHGV-1955298_30	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1955298_30	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1955298_30	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-1955298_31	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-1955298_33	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1955298_37	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-1955298_37	PHROG	phrog_25567	NA	unknown function
UHGV-1955298_37	UniRef90	UniRef90_UPI00164AED9E	helix-turn-helix domain-containing protein	NA
UHGV-1955298_37	eggNOG-mapper	1235798.C817_04600	NA	NA
UHGV-1955298_37	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1955298_37	Structural annotation	NF040522, COG2944	NA	NA
UHGV-1955298_39	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-1955298_39	PHROG	phrog_894	endolysin	lysis
UHGV-1955298_39	UniRef90	UniRef90_K1TJK4	Peptidase_M15_3 domain-containing protein (Fragment)	NA
UHGV-1955298_39	eggNOG-mapper	1235797.C816_04171	Peptidase M15	NA
UHGV-1955298_39	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-1955298_39	COG	COG3108	NA	NA
UHGV-1955298_39	Structural annotation	PF05951, COG3108	NA	NA
UHGV-1955298_40	PHROG	phrog_18955	NA	unknown function
UHGV-1955298_40	UniRef90	UniRef90_UPI00164D2830	phosphodiester glycosidase family protein	NA
UHGV-1955298_40	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-1955298_40	COG	COG4632	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	NA
UHGV-1955298_40	Structural annotation	PF09992, COG4632	NA	NA
UHGV-1955298_42	PHROG	phrog_13256	NA	unknown function
UHGV-1955298_42	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-1955298_43	PHROG	phrog_4105	NA	unknown function
UHGV-1955298_43	eggNOG-mapper	411460.RUMTOR_01326	NA	NA
UHGV-1955298_44	PHROG	phrog_3904	tail fiber protein	tail
UHGV-1955298_44	eggNOG-mapper	1226322.HMPREF1545_00064	NA	NA
UHGV-1955298_44	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1955298_45	PHROG	phrog_32744	NA	unknown function
UHGV-1955298_45	eggNOG-mapper	1232449.BAHV02000010_gene2725	NA	NA
UHGV-1955298_45	Structural annotation	PF14594, PF21722, NF033848, COG4379	NA	NA
UHGV-1955298_47	PHROG	phrog_23464	NA	unknown function
UHGV-1955298_47	eggNOG-mapper	33035.JPJF01000023_gene3232	phage tail tape measure protein	NA
UHGV-1955298_47	COG	COG5412	Phage-related protein	NA
UHGV-1955298_47	Structural annotation	TIGR01760, COG5280	NA	NA
UHGV-1955298_49	PHROG	phrog_88	major tail protein	tail
UHGV-1955298_49	UniRef90	UniRef90_R5EB96	Phage major tail protein phi13 family	NA
UHGV-1955298_49	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-1955298_50	UniRef90	UniRef90_R5IIS5	HK97 gp10 family phage protein	NA
UHGV-1955298_50	eggNOG-mapper	1203606.HMPREF1526_00974	NA	NA
UHGV-1955298_50	Structural annotation	TIGR01725	NA	NA
UHGV-1955298_51	UniRef90	UniRef90_UPI00102FC317	phage tail protein	NA
UHGV-1955298_51	eggNOG-mapper	1203606.HMPREF1526_00975	NA	NA
UHGV-1955298_51	Structural annotation	PF05657	NA	NA
UHGV-1955298_52	PHROG	phrog_25	head closure Hc1	connector
UHGV-1955298_52	UniRef90	UniRef90_UPI001898DBDF	phage head closure protein	NA
UHGV-1955298_52	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1955298_52	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1955298_52	COG	COG5614	Phage head-tail adaptor	NA
UHGV-1955298_52	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1955298_53	UniRef90	UniRef90_UPI001C018007	head-tail connector protein	NA
UHGV-1955298_53	eggNOG-mapper	742738.HMPREF9460_00878	NA	NA
UHGV-1955298_53	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-1955298_53	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1955298_54	PHROG	phrog_10	major head protein	head and packaging
UHGV-1955298_54	UniRef90	UniRef90_A0A1Y4RLC8	Phage major capsid protein	NA
UHGV-1955298_54	eggNOG-mapper	1236976.JCM16418_795	Phage capsid family	NA
UHGV-1955298_54	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1955298_54	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1955298_54	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1955298_54	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1955298_55	PHROG	phrog_16951	NA	unknown function
UHGV-1955298_55	eggNOG-mapper	742738.HMPREF9460_04070	NA	NA
UHGV-1955298_55	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-1955298_56	PHROG	phrog_12	portal protein	head and packaging
UHGV-1955298_56	UniRef90	UniRef90_A0A845R2J9	Phage portal protein	NA
UHGV-1955298_56	eggNOG-mapper	397288.C806_01508	Phage portal protein	NA
UHGV-1955298_56	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1955298_56	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1955298_56	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1955298_56	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1955298_58	PHROG	phrog_2699	terminase large subunit	head and packaging
UHGV-1955298_58	UniRef90	UniRef90_UPI0009D97908	terminase large subunit	NA
UHGV-1955298_58	eggNOG-mapper	742738.HMPREF9460_00872	Phage Terminase	NA
UHGV-1955298_58	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1955298_58	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1955298_58	Structural annotation	PF20441, MF_04145, TIGR01547, COG1783	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1955298	Yes	36,696 bps	59.83%	96.42%	0.9800
UHGV-0203609	No	39,652 bps	60.26%	99.90%	0.9752
UHGV-2241549	No	13,758 bps	61.85%	36.06%	0.9824