vOTU-011636

Overview

vOTU representative UHGV-2011167

No. of genomes 5

Genome length 12,287 bps

Completeness 91.16% (high-quality)

Host Coriobacteriales

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-011636
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00133 › vSUBFAM-00382 › vGENUS-00937 › vSUBGEN-01112 › vOTU-011636
Host taxonomy	Bacteria › Actinobacteriota › Coriobacteriia › Coriobacteriales
Host range breadth	Order
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2011167
BioSample	SAMEA2580110
Genome length	12,287 bps
CheckV completeness	91.16% (high-quality)
CheckV contamination	0.00%
CDS count	18
CDS density	87.41%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2011167_1	PHROG	phrog_1829	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-2011167_1	UniRef90	UniRef90_UPI0013EAA0F5	primase C-terminal domain-containing protein	NA
UHGV-2011167_1	eggNOG-mapper	1230457.C476_17702	Phage plasmid primase, P4	NA
UHGV-2011167_1	COG	COG4983	Primase-polymerase (Primpol) domain protein	NA
UHGV-2011167_2	Structural annotation	PF06504, COG5527	NA	NA
UHGV-2011167_3	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-2011167_5	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-2011167_5	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-2011167_5	UniRef90	UniRef90_UPI00195E16D6	ParA family protein	NA
UHGV-2011167_5	eggNOG-mapper	1536772.R70723_32505	Sporulation initiation inhibitor Soj	NA
UHGV-2011167_5	Pfam	PF13614	AAA domain	AAA_31
UHGV-2011167_5	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-2011167_5	Structural annotation	PF13614, MF_00533, NF010443, COG1192	NA	NA
UHGV-2011167_6	PHROG	phrog_314	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2011167_6	eggNOG-mapper	476272.RUMHYD_01755	GIY-YIG type nucleases (URI domain)	NA
UHGV-2011167_6	COG	COG3860	NA	NA
UHGV-2011167_6	Structural annotation	PF19835, TIGR01453	NA	NA
UHGV-2011167_8	UniRef90	UniRef90_A0A414U9B3	NA	NA
UHGV-2011167_8	eggNOG-mapper	1235794.C811_01976	NA	NA
UHGV-2011167_8	Pfam	PF12957	NA	DUF3846
UHGV-2011167_9	UniRef90	UniRef90_A0A357CLM6	Head-tail adaptor protein	NA
UHGV-2011167_9	eggNOG-mapper	457415.HMPREF1006_01810	Phage head-tail joining protein	NA
UHGV-2011167_9	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2011167_9	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2011167_10	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2011167_10	UniRef90	UniRef90_A0A151ATM3	Phage terminase	NA
UHGV-2011167_10	eggNOG-mapper	1089548.KI783301_gene3220	Terminase	NA
UHGV-2011167_10	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2011167_10	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2011167_10	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2011167_10	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2011167_11	PHROG	phrog_1066	NA	unknown function
UHGV-2011167_11	eggNOG-mapper	1111134.HMPREF1253_0387	NA	NA
UHGV-2011167_13	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-2011167_13	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2011167_13	UniRef90	UniRef90_UPI00195C7236	HNH endonuclease	NA
UHGV-2011167_13	eggNOG-mapper	397290.C810_00416	HNH endonuclease	NA
UHGV-2011167_13	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2011167_13	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2011167_14	UniRef90	UniRef90_A0A0V8JHQ1	DNA packaging protein	NA
UHGV-2011167_14	eggNOG-mapper	1089548.KI783301_gene3223	NA	NA
UHGV-2011167_14	AcrCatalog	cluster_178303	NA	NA
UHGV-2011167_14	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-2011167_14	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2011167_14	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-2011167_15	PHROG	phrog_10	major head protein	head and packaging
UHGV-2011167_15	UniRef90	UniRef90_A0A353BS62	Phage major capsid protein	NA
UHGV-2011167_15	eggNOG-mapper	1297617.JPJD01000009_gene2879	Phage capsid family	NA
UHGV-2011167_15	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2011167_15	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2011167_15	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2011167_15	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2011167_16	KOfam	K06904	NA	NA
UHGV-2011167_16	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-2011167_16	UniRef90	UniRef90_A0A7T3T3P5	HK97 family phage prohead protease	NA
UHGV-2011167_16	eggNOG-mapper	1089548.KI783301_gene3225	Caudovirus prohead serine protease	NA
UHGV-2011167_16	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-2011167_16	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-2011167_16	COG	COG3740	Phage head maturation protease	NA
UHGV-2011167_16	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-2011167_17	PHROG	phrog_12	portal protein	head and packaging
UHGV-2011167_17	UniRef90	UniRef90_A0A2T4U2M6	Phage portal protein	NA
UHGV-2011167_17	eggNOG-mapper	1089548.KI783301_gene3227	Phage portal protein	NA
UHGV-2011167_17	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2011167_17	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2011167_17	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2011167	Yes	12,287 bps	54.96%	91.16%	0.9739
UHGV-0212135	No	12,634 bps	55.56%	99.90%	0.9748
UHGV-0247434	No	12,492 bps	55.21%	87.74%	0.9736
UHGV-0042316	No	11,233 bps	55.00%	80.66%	0.9679
UHGV-1477818	No	8,104 bps	55.43%	54.78%	0.9807