vOTU-011887

Overview

No. of genomes 12

Genome length 39,621 bps

Completeness 97.19% (high-quality)

Host Intestinibacter bartlettii

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-011887
Number of genomes	12
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00934 › vGENUS-02096 › vSUBGEN-39105 › vOTU-011887
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Peptostreptococcales › Peptostreptococcaceae › Intestinibacter › Intestinibacter bartlettii
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1382682
BioSample	NA
Genome length	39,621 bps
CheckV completeness	97.19% (high-quality)
CheckV contamination	0.00%
CDS count	54
CDS density	90.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1382682_1	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-1382682_1	UniRef90	UniRef90_UPI0003D5A199	phage terminase small subunit P27 family	NA
UHGV-1382682_1	eggNOG-mapper	1219626.HMPREF1639_07405	phage terminase small subunit	NA
UHGV-1382682_1	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1382682_1	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-1382682_1	COG	COG3747	Phage terminase, small subunit	NA
UHGV-1382682_2	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1382682_2	UniRef90	UniRef90_UPI0011061D03	terminase large subunit	NA
UHGV-1382682_2	eggNOG-mapper	1211817.CCAT010000053_gene2129	Phage Terminase	NA
UHGV-1382682_2	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1382682_2	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1382682_2	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1382682_2	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1382682_3	PHROG	phrog_12	portal protein	head and packaging
UHGV-1382682_3	UniRef90	UniRef90_UPI00148519DF	phage portal protein	NA
UHGV-1382682_3	eggNOG-mapper	349161.Dred_2606	Phage portal protein, HK97 family	NA
UHGV-1382682_3	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1382682_3	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1382682_3	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1382682_3	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1382682_4	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-1382682_4	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-1382682_4	UniRef90	UniRef90_UPI00110724D9	Clp protease ClpP	NA
UHGV-1382682_4	eggNOG-mapper	1232452.BAIB02000007_gene1626	Belongs to the peptidase S14 family	NA
UHGV-1382682_4	Pfam	PF00574	Clp protease	CLP_protease
UHGV-1382682_4	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-1382682_4	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-1382682_5	PHROG	phrog_10	major head protein	head and packaging
UHGV-1382682_5	UniRef90	UniRef90_UPI001107332E	phage major capsid protein	NA
UHGV-1382682_5	eggNOG-mapper	349161.Dred_2604	Phage capsid family	NA
UHGV-1382682_5	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1382682_5	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1382682_5	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1382682_5	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1382682_6	PHROG	phrog_749	NA	unknown function
UHGV-1382682_6	UniRef90	UniRef90_A0A1I3QJG6	Phage gp6-like head-tail connector protein	NA
UHGV-1382682_7	PHROG	phrog_5635	head-tail adaptor	connector
UHGV-1382682_7	UniRef90	UniRef90_UPI0011070497	phage head closure protein	NA
UHGV-1382682_7	eggNOG-mapper	1220589.CD32_01710	NA	NA
UHGV-1382682_7	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1382682_7	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1382682_8	Structural annotation	PF05657, COG3167	NA	NA
UHGV-1382682_9	PHROG	phrog_5509	neck protein	connector
UHGV-1382682_9	eggNOG-mapper	936140.AEOT01000014_gene1361	NA	NA
UHGV-1382682_9	Structural annotation	TIGR01725, COG5005	NA	NA
UHGV-1382682_10	UniRef90	UniRef90_A0A316S919	Phage tail protein	NA
UHGV-1382682_10	eggNOG-mapper	1384484.AEQU_1175	NA	NA
UHGV-1382682_10	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-1382682_11	eggNOG-mapper	1121866.AUGK01000006_gene886	NA	NA
UHGV-1382682_12	KOfam	K06240	LAMA3_5; laminin, alpha 3/5	NA
UHGV-1382682_12	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-1382682_12	UniRef90	UniRef90_UPI0011074901	phage tail tape measure protein	NA
UHGV-1382682_12	eggNOG-mapper	397290.C810_00429	Phage-related minor tail protein	NA
UHGV-1382682_12	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-1382682_12	COG	COG5280	Phage-related minor tail protein	NA
UHGV-1382682_12	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-1382682_13	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1382682_13	UniRef90	UniRef90_A0A1C5VG03	Phage-related protein	NA
UHGV-1382682_13	eggNOG-mapper	573061.Clocel_3532	tail component	NA
UHGV-1382682_13	COG	COG4722	Phage-related protein YomH	NA
UHGV-1382682_13	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1382682_14	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-1382682_14	PHROG	phrog_7043	tail protein	tail
UHGV-1382682_14	UniRef90	UniRef90_UPI0011CA3AC4	SH3 domain-containing protein	NA
UHGV-1382682_14	eggNOG-mapper	1292035.H476_1004	Prophage endopeptidase tail	NA
UHGV-1382682_14	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1382682_14	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-1382682_14	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1382682_14	COG	COG4926	Phage-related protein	NA
UHGV-1382682_14	Structural annotation	PF14594, PF08239, PF19081, PF13229, TIGR01665, NF040678, COG4926, COG4991, COG0791	NA	NA
UHGV-1382682_15	PHROG	phrog_32311	NA	unknown function
UHGV-1382682_15	UniRef90	UniRef90_W1WLY3	BppU_N domain-containing protein	NA
UHGV-1382682_15	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-1382682_15	Structural annotation	PF10651	NA	NA
UHGV-1382682_18	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-1382682_18	Structural annotation	NF040910	NA	NA
UHGV-1382682_19	UniRef90	UniRef90_A0A3D1WPK4	ATPgrasp_ST domain-containing protein	NA
UHGV-1382682_19	eggNOG-mapper	698758.AXY_19860	Sugar-transfer associated ATP-grasp	NA
UHGV-1382682_19	Pfam	PF14397	Sugar-transfer associated ATP-grasp	ATPgrasp_ST
UHGV-1382682_19	COG	COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	NA
UHGV-1382682_20	PHROG	phrog_1193	hemolysin	other
UHGV-1382682_20	UniRef90	UniRef90_UPI0018AB0AA6	hemolysin XhlA family protein	NA
UHGV-1382682_20	eggNOG-mapper	445335.CBN_3060	Haemolysin XhlA	NA
UHGV-1382682_20	Pfam	PF10779	Haemolysin XhlA	XhlA
UHGV-1382682_21	UniRef90	UniRef90_A0A1L8MK41	Phage holin	NA
UHGV-1382682_21	eggNOG-mapper	272626.lin1702	Bacteriophage holin	NA
UHGV-1382682_21	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-1382682_21	COG	COG5546	NA	NA
UHGV-1382682_22	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1382682_22	PHROG	phrog_435	endolysin	lysis
UHGV-1382682_22	UniRef90	UniRef90_UPI001106ED5F	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1382682_22	eggNOG-mapper	445973.CLOBAR_01731	Ami_3	NA
UHGV-1382682_22	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1382682_22	Pfam	PF19087	NA	DUF5776
UHGV-1382682_22	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1382682_22	Structural annotation	PF01520, PF19087, TIGR02883, COG0860, COG4991	NA	NA
UHGV-1382682_23	PHROG	phrog_9996	NA	unknown function
UHGV-1382682_23	UniRef90	UniRef90_UPI0011071500	replication-relaxation family protein	NA
UHGV-1382682_23	Pfam	PF13814	Replication-relaxation	Replic_Relax
UHGV-1382682_23	Structural annotation	PF13814, MF_01819, NF041423, COG1733	NA	NA
UHGV-1382682_24	KOfam	K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	NA
UHGV-1382682_24	PHROG	phrog_1358	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UHGV-1382682_24	UniRef90	UniRef90_A0A267MQD1	FtsK domain-containing protein	NA
UHGV-1382682_24	eggNOG-mapper	1463900.JOIX01000030_gene4772	NA	NA
UHGV-1382682_24	PADLOC	SspH_00004	SspH	SSP
UHGV-1382682_24	Pfam	PF01580	FtsK/SpoIIIE family	FtsK_SpoIIIE
UHGV-1382682_24	COG	COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	NA
UHGV-1382682_24	Structural annotation	PF01580, MF_01836, NF041214, COG0433	NA	NA
UHGV-1382682_25	PHROG	phrog_38798	NA	unknown function
UHGV-1382682_25	eggNOG-mapper	1292035.H476_0669	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	NA
UHGV-1382682_25	COG	COG0621	tRNA A37 methylthiotransferase MiaB	NA
UHGV-1382682_26	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1382682_26	PHROG	phrog_95	integrase	integration and excision
UHGV-1382682_26	UniRef90	UniRef90_UPI00189BD721	recombinase family protein	NA
UHGV-1382682_26	eggNOG-mapper	1151292.QEW_4366	Resolvase, N terminal domain	NA
UHGV-1382682_26	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1382682_26	Pfam	PF07508	Recombinase	Recombinase
UHGV-1382682_26	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-1382682_26	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1382682_26	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-1382682_27	UniRef90	UniRef90_A0A1I3QID6	Cro/C1-type HTH DNA-binding domain-containing protein	NA
UHGV-1382682_27	eggNOG-mapper	1280689.AUJC01000024_gene150	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1382682_27	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1382682_28	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-1382682_28	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-1382682_28	UniRef90	UniRef90_UPI0011061316	helix-turn-helix domain-containing protein	NA
UHGV-1382682_28	eggNOG-mapper	411468.CLOSCI_01457	Helix-turn-helix XRE-family like proteins	NA
UHGV-1382682_28	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1382682_28	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1382682_28	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-1382682_29	PHROG	phrog_36092	NA	unknown function
UHGV-1382682_31	UniRef90	UniRef90_UPI001105B88F	Rho termination factor N-terminal domain-containing protein	NA
UHGV-1382682_31	Pfam	PF07498	Rho termination factor, N-terminal domain	Rho_N
UHGV-1382682_33	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1382682_33	UniRef90	UniRef90_A0A1I5LZL1	Relaxase/Mobilisation nuclease domain-containing protein	NA
UHGV-1382682_33	eggNOG-mapper	1196322.A370_05744	NA	NA
UHGV-1382682_33	Structural annotation	PF21578	NA	NA
UHGV-1382682_34	PHROG	phrog_824	NA	unknown function
UHGV-1382682_34	UniRef90	UniRef90_UPI001105A33E	VRR-NUC domain-containing protein	NA
UHGV-1382682_34	eggNOG-mapper	411468.CLOSCI_00556	VRR_NUC	NA
UHGV-1382682_34	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-1382682_35	PHROG	phrog_1974	NA	unknown function
UHGV-1382682_35	UniRef90	UniRef90_A0A371ISD9	Nucleoid-associated protein	NA
UHGV-1382682_35	eggNOG-mapper	1301100.HG529375_gene4038	37-kD nucleoid-associated bacterial protein	NA
UHGV-1382682_35	Pfam	PF04245	37-kD nucleoid-associated bacterial protein	NA37
UHGV-1382682_35	COG	COG3081	dsDNA-binding nucleoid-associated protein YejK/NdpA	NA
UHGV-1382682_35	Structural annotation	PF04245, MF_00730, NF001557, COG3081	NA	NA
UHGV-1382682_36	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-1382682_36	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-1382682_36	UniRef90	UniRef90_UPI001AE15354	phage antirepressor KilAC domain-containing protein	NA
UHGV-1382682_36	eggNOG-mapper	1415775.U729_2580	BRO family, N-terminal domain	NA
UHGV-1382682_36	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-1382682_36	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-1382682_36	COG	COG3617	Prophage antirepressor	NA
UHGV-1382682_36	Structural annotation	PF02498, PF03374, TIGR02681, COG3617	NA	NA
UHGV-1382682_38	PHROG	phrog_5164	NA	unknown function
UHGV-1382682_38	Structural annotation	PF06892	NA	NA
UHGV-1382682_40	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1382682_40	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1382682_40	UniRef90	UniRef90_UPI0011060A1D	single-stranded DNA-binding protein	NA
UHGV-1382682_40	eggNOG-mapper	445973.CLOBAR_00026	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1382682_40	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1382682_40	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1382682_40	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1382682_40	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1382682_40	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-1382682_43	KOfam	K03091	sigH; RNA polymerase sporulation-specific sigma factor	NA
UHGV-1382682_43	PHROG	phrog_351	RNA polymerase sigma factor	transcription regulation
UHGV-1382682_43	UniRef90	UniRef90_UPI0014857828	sigma-70 family RNA polymerase sigma factor	NA
UHGV-1382682_43	eggNOG-mapper	1120746.CCNL01000010_gene1166	Sigma-70 region 2	NA
UHGV-1382682_43	Pfam	PF04542	Sigma-70 region 2	Sigma70_r2
UHGV-1382682_43	NCBIFam	TIGR02937.1	sigma-70 family RNA polymerase sigma factor	NA
UHGV-1382682_43	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1382682_43	Structural annotation	PF04542, PF13404, MF_00959, TIGR02835, COG1191	NA	NA
UHGV-1382682_46	PHROG	phrog_98	NA	unknown function
UHGV-1382682_46	UniRef90	UniRef90_A0A1C5YXI2	YopX protein	NA
UHGV-1382682_46	eggNOG-mapper	768726.HMPREF9178_1074	YopX protein	NA
UHGV-1382682_46	Pfam	PF09643	YopX protein	YopX
UHGV-1382682_46	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1382682_46	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1382682_48	PHROG	phrog_1485	NA	unknown function
UHGV-1382682_48	UniRef90	UniRef90_UPI001105E44C	nucleotide modification associated domain-containing protein	NA
UHGV-1382682_48	eggNOG-mapper	1121871.AUAT01000002_gene1368	NA	NA
UHGV-1382682_48	Pfam	PF07659	Nucleotide modification associated domain 1	DUF1599
UHGV-1382682_49	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1382682_49	UniRef90	UniRef90_A0A1C5YXD8	Phage transcriptional regulator, RinA family	NA
UHGV-1382682_49	eggNOG-mapper	1151292.QEW_0398	sigma factor activity	NA
UHGV-1382682_49	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1382682_49	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-1382682_50	PHROG	phrog_9079	NA	unknown function
UHGV-1382682_50	eggNOG-mapper	445973.CLOBAR_02450	NA	NA
UHGV-1382682_53	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1382682_53	UniRef90	UniRef90_A0A1I3QJN8	HNH endonuclease	NA
UHGV-1382682_53	eggNOG-mapper	768710.DesyoDRAFT_1275	HNH nucleases	NA
UHGV-1382682_53	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1382682_54	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1382682_54	UniRef90	UniRef90_A0A3C0J9E5	XRE family transcriptional regulator	NA
UHGV-1382682_54	eggNOG-mapper	1469948.JPNB01000002_gene3304	Helix-turn-helix XRE-family like proteins	NA
UHGV-1382682_54	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1382682_54	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1382682	Yes	39,621 bps	28.47%	97.19%	0.9654
UHGV-0076651	No	39,621 bps	28.47%	97.19%	0.9654
UHGV-1488151	No	39,096 bps	28.39%	95.90%	0.9658
UHGV-2015742	No	39,044 bps	28.40%	95.78%	0.9684
UHGV-0291251	No	37,137 bps	28.42%	91.10%	0.9655
UHGV-1353614	No	29,289 bps	28.69%	71.86%	0.9717
UHGV-0391739	No	28,912 bps	28.36%	70.94%	0.9707
UHGV-1420415	No	21,737 bps	29.59%	53.34%	0.9766
UHGV-1772137	No	17,240 bps	30.17%	42.31%	0.9786
UHGV-0333142	No	12,501 bps	27.28%	30.61%	0.9507
UHGV-1826335	No	12,012 bps	29.27%	27.29%	0.9809
UHGV-1557566	No	10,125 bps	29.39%	22.87%	0.9816