vOTU-012611

Overview

vOTU representative UHGV-2022641

No. of genomes 3

Genome length 41,093 bps

Completeness 99.90% (high-quality)

Host Proteobacteria

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-012611
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-01277 › vGENUS-16833 › vSUBGEN-30733 › vOTU-012611
Host taxonomy	Bacteria › Proteobacteria
Host range breadth	Phylum
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2022641
BioSample	NA
Genome length	41,093 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	66
CDS density	94.52%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2022641_1	UniRef90	UniRef90_A0A7X5D8A4	SPOR domain-containing protein	NA
UHGV-2022641_2	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-2022641_2	PHROG	phrog_14030	NA	unknown function
UHGV-2022641_2	UniRef90	UniRef90_R9N3F1	SH3b domain-containing protein	NA
UHGV-2022641_2	eggNOG-mapper	1235800.C819_00464	NA	NA
UHGV-2022641_2	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-2022641_2	Structural annotation	PF01374, PF08230, PF04319, TIGR02594, NF041850, COG4991, COG4322	NA	NA
UHGV-2022641_4	PHROG	phrog_6918	holin	lysis
UHGV-2022641_4	UniRef90	UniRef90_R9N4H5	LL-H family phage holin	NA
UHGV-2022641_4	eggNOG-mapper	1235800.C819_00466	Bacteriophage holin of superfamily 6 (Holin_LLH)	NA
UHGV-2022641_4	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-2022641_4	NCBIFam	TIGR01673.1	phage holin	NA
UHGV-2022641_6	PHROG	phrog_37604	NA	unknown function
UHGV-2022641_6	eggNOG-mapper	1235800.C819_00468	NA	NA
UHGV-2022641_8	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-2022641_8	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-2022641_8	UniRef90	UniRef90_A0A7U9N1R4	Reverse transcriptase domain-containing protein	NA
UHGV-2022641_8	eggNOG-mapper	1235800.C819_00470	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-2022641_8	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-2022641_8	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-2022641_8	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-2022641_8	Structural annotation	PF00078, TIGR04416, COG3344	NA	NA
UHGV-2022641_10	Structural annotation	PF05635, TIGR02436	NA	NA
UHGV-2022641_11	UniRef90	UniRef90_R9NCZ1	NA	NA
UHGV-2022641_11	eggNOG-mapper	1235800.C819_00472	NA	NA
UHGV-2022641_11	Pfam	PF19789	NA	DUF6273
UHGV-2022641_11	Structural annotation	PF19789	NA	NA
UHGV-2022641_12	PHROG	phrog_18725	NA	unknown function
UHGV-2022641_12	eggNOG-mapper	1235800.C819_00473	NA	NA
UHGV-2022641_13	PHROG	phrog_13879	NA	unknown function
UHGV-2022641_13	eggNOG-mapper	1235800.C819_00474	NA	NA
UHGV-2022641_13	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-2022641_14	PHROG	phrog_1194	NA	unknown function
UHGV-2022641_14	UniRef90	UniRef90_A0A4U9RD70	Lj965 prophage protein	NA
UHGV-2022641_14	eggNOG-mapper	764562.D7RWK1_9CAUD	NA	NA
UHGV-2022641_14	Pfam	PF20458	NA	DUF6711
UHGV-2022641_14	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-2022641_15	KOfam	K20254	PLIN4; perilipin-4	NA
UHGV-2022641_15	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-2022641_15	UniRef90	UniRef90_A0A174SV65	Phage-like protein	NA
UHGV-2022641_15	eggNOG-mapper	1235800.C819_00476	tape measure	NA
UHGV-2022641_15	Pfam	PF20572	NA	DUF6781
UHGV-2022641_15	Pfam	PF04513	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
UHGV-2022641_15	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2022641_15	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-2022641_16	eggNOG-mapper	1235800.C819_00477	NA	NA
UHGV-2022641_17	PHROG	phrog_183	tail chaperone protein	tail
UHGV-2022641_17	UniRef90	UniRef90_UPI000591783D	NA	NA
UHGV-2022641_17	eggNOG-mapper	1235800.C819_00478	NA	NA
UHGV-2022641_17	Pfam	PF19591	NA	DUF6096
UHGV-2022641_17	Structural annotation	PF19591	NA	NA
UHGV-2022641_18	PHROG	phrog_158	major tail protein	tail
UHGV-2022641_18	UniRef90	UniRef90_UPI001158F5FB	phage tail protein	NA
UHGV-2022641_18	eggNOG-mapper	1235800.C819_00479	Phage tail tube protein, TTP	NA
UHGV-2022641_18	Pfam	PF08813	Phage tail tube protein, TTP	Phage_tail_3
UHGV-2022641_18	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-2022641_19	PHROG	phrog_78	tail terminator	connector
UHGV-2022641_19	eggNOG-mapper	1235800.C819_00480	NA	NA
UHGV-2022641_19	Structural annotation	PF05657	NA	NA
UHGV-2022641_20	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2022641_20	UniRef90	UniRef90_R9N4I7	HK97 gp10 family phage protein	NA
UHGV-2022641_20	eggNOG-mapper	1235800.C819_00481	NA	NA
UHGV-2022641_20	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2022641_20	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-2022641_20	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2022641_21	PHROG	phrog_2168	NA	unknown function
UHGV-2022641_21	eggNOG-mapper	1235800.C819_00482	NA	NA
UHGV-2022641_21	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-2022641_22	PHROG	phrog_132	head-tail adaptor	connector
UHGV-2022641_22	UniRef90	UniRef90_A0A1G5CLS7	Phage gp6-like head-tail connector protein	NA
UHGV-2022641_22	eggNOG-mapper	1235800.C819_00483	Phage gp6-like head-tail connector protein	NA
UHGV-2022641_22	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-2022641_22	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-2022641_23	UniRef90	UniRef90_R9N3H6	Rho_N domain-containing protein	NA
UHGV-2022641_23	Pfam	PF07498	Rho termination factor, N-terminal domain	Rho_N
UHGV-2022641_24	PHROG	phrog_267	major head protein	head and packaging
UHGV-2022641_24	UniRef90	UniRef90_A0A6N2YA79	P22 coat protein - gene protein 5	NA
UHGV-2022641_24	eggNOG-mapper	1235800.C819_00485	P22 coat protein-protein 5 domain protein	NA
UHGV-2022641_24	Pfam	PF11651	P22 coat protein - gene protein 5	P22_CoatProtein
UHGV-2022641_24	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2022641_25	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-2022641_25	UniRef90	UniRef90_A0A7X5D6T5	NA	NA
UHGV-2022641_25	eggNOG-mapper	1235800.C819_00486	NA	NA
UHGV-2022641_25	Pfam	PF14265	NA	DUF4355
UHGV-2022641_25	Structural annotation	PF14265	NA	NA
UHGV-2022641_26	PHROG	phrog_1048	NA	unknown function
UHGV-2022641_26	UniRef90	UniRef90_UPI001922BDE8	NA	NA
UHGV-2022641_26	eggNOG-mapper	588581.Cpap_1521	NA	NA
UHGV-2022641_26	Pfam	PF11195	NA	DUF2829
UHGV-2022641_26	Structural annotation	PF11195	NA	NA
UHGV-2022641_27	PHROG	phrog_29156	NA	unknown function
UHGV-2022641_28	PHROG	phrog_115	minor head protein	head and packaging
UHGV-2022641_28	UniRef90	UniRef90_A0A7U9MR13	NAD(+)--arginine ADP-ribosyltransferase EFV	NA
UHGV-2022641_28	eggNOG-mapper	742740.HMPREF9474_02356	Phage head morphogenesis protein, SPP1 gp7 family	NA
UHGV-2022641_28	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-2022641_28	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-2022641_28	COG	COG2369	NA	NA
UHGV-2022641_28	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-2022641_29	PHROG	phrog_64	portal protein	head and packaging
UHGV-2022641_29	UniRef90	UniRef90_R9N3I1	SPP1 family phage portal protein	NA
UHGV-2022641_29	eggNOG-mapper	1235800.C819_00489	Phage portal protein, SPP1 Gp6-like	NA
UHGV-2022641_29	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2022641_29	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-2022641_29	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-2022641_30	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2022641_30	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-2022641_30	UniRef90	UniRef90_R9N4B6	PBSX family phage terminase, large subunit	NA
UHGV-2022641_30	eggNOG-mapper	1235800.C819_00493	Phage terminase large subunit	NA
UHGV-2022641_30	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-2022641_30	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-2022641_30	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2022641_30	COG	COG1783	Phage terminase large subunit	NA
UHGV-2022641_30	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-2022641_31	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-2022641_31	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-2022641_31	UniRef90	UniRef90_UPI00115BDA84	terminase small subunit	NA
UHGV-2022641_31	eggNOG-mapper	1235800.C819_00494	Terminase small subunit	NA
UHGV-2022641_31	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-2022641_31	COG	COG3728	Phage terminase, small subunit	NA
UHGV-2022641_31	Structural annotation	PF03592, COG3728	NA	NA
UHGV-2022641_33	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2022641_33	UniRef90	UniRef90_UPI001D2E40B6	RNA polymerase subunit sigma-24	NA
UHGV-2022641_33	eggNOG-mapper	1235800.C819_00496	NA	NA
UHGV-2022641_33	Structural annotation	PF02996	NA	NA
UHGV-2022641_34	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2022641_34	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2022641_34	UniRef90	UniRef90_A0A7J0B472	Single-stranded DNA-binding protein	NA
UHGV-2022641_34	eggNOG-mapper	1235800.C819_00497	single-stranded DNA binding	NA
UHGV-2022641_34	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2022641_34	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2022641_34	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2022641_34	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-2022641_36	PHROG	phrog_5889	NA	unknown function
UHGV-2022641_36	UniRef90	UniRef90_A0A843HIF4	HDIG domain-containing protein	NA
UHGV-2022641_36	eggNOG-mapper	1235800.C819_00499	metal-dependent phosphohydrolase, HD sub domain	NA
UHGV-2022641_36	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-2022641_36	Structural annotation	PF21447, MF_01427, NF010007, COG3481	NA	NA
UHGV-2022641_39	PHROG	phrog_98	NA	unknown function
UHGV-2022641_39	UniRef90	UniRef90_R9N4K2	YopX domain-containing protein	NA
UHGV-2022641_39	Pfam	PF09643	YopX protein	YopX
UHGV-2022641_41	PHROG	phrog_4572	NA	unknown function
UHGV-2022641_41	eggNOG-mapper	1395513.P343_08060	NA	NA
UHGV-2022641_42	KOfam	K01449	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2022641_42	PHROG	phrog_14642	endolysin	lysis
UHGV-2022641_42	UniRef90	UniRef90_A0A7U9MPU7	Hydrolase_2 domain-containing protein	NA
UHGV-2022641_42	eggNOG-mapper	1235800.C819_00503	Cell Wall Hydrolase	NA
UHGV-2022641_42	Pfam	PF07486	Cell Wall Hydrolase	Hydrolase_2
UHGV-2022641_42	COG	COG3773	Cell wall hydrolase CwlJ, involved in spore germination	NA
UHGV-2022641_42	Structural annotation	PF07486, TIGR02869, COG3773	NA	NA
UHGV-2022641_43	PHROG	phrog_625	NA	unknown function
UHGV-2022641_43	UniRef90	UniRef90_A0A7X5CBN4	ASCH domain-containing protein	NA
UHGV-2022641_43	eggNOG-mapper	411463.EUBVEN_00477	NA	NA
UHGV-2022641_43	Structural annotation	PF12961	NA	NA
UHGV-2022641_44	UniRef90	UniRef90_A0A3A9AKE5	NA	NA
UHGV-2022641_44	eggNOG-mapper	1235800.C819_00506	NA	NA
UHGV-2022641_44	Pfam	PF19789	NA	DUF6273
UHGV-2022641_44	Structural annotation	PF19789	NA	NA
UHGV-2022641_46	PHROG	phrog_9298	radical SAM domain protein	other
UHGV-2022641_46	UniRef90	UniRef90_A0A374LFY7	Radical SAM protein	NA
UHGV-2022641_46	eggNOG-mapper	742733.HMPREF9469_01256	NA	NA
UHGV-2022641_46	COG	COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	NA
UHGV-2022641_46	Structural annotation	MF_01864, NF010916, COG2516	NA	NA
UHGV-2022641_47	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-2022641_47	PHROG	phrog_23072	DNA methyltransferase	other
UHGV-2022641_47	UniRef90	UniRef90_R9N4C7	DNA (cytosine-5-)-methyltransferase	NA
UHGV-2022641_47	eggNOG-mapper	1235800.C819_00508	C-5 cytosine-specific DNA methylase	NA
UHGV-2022641_47	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-2022641_47	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-2022641_47	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2022641_47	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-2022641_48	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-2022641_48	PHROG	phrog_29443	NA	unknown function
UHGV-2022641_48	UniRef90	UniRef90_A5KP91	DNA (cytosine-5-)-methyltransferase	NA
UHGV-2022641_48	eggNOG-mapper	1235800.C819_00508	C-5 cytosine-specific DNA methylase	NA
UHGV-2022641_48	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2022641_49	eggNOG-mapper	1235800.C819_00510	NA	NA
UHGV-2022641_50	PHROG	phrog_7566	NA	unknown function
UHGV-2022641_50	eggNOG-mapper	1235800.C819_00511	NA	NA
UHGV-2022641_51	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-2022641_51	UniRef90	UniRef90_A0A316P7K4	NA	NA
UHGV-2022641_51	eggNOG-mapper	1235800.C819_00512	NA	NA
UHGV-2022641_53	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-2022641_53	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-2022641_53	UniRef90	UniRef90_A0A316PA49	RNase H type-1 domain-containing protein	NA
UHGV-2022641_53	eggNOG-mapper	1235800.C819_00514	RNase H	NA
UHGV-2022641_53	Pfam	PF00075	RNase H	RNase_H
UHGV-2022641_53	COG	COG0328	Ribonuclease HI	NA
UHGV-2022641_53	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-2022641_54	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2022641_54	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-2022641_54	Structural annotation	PF21578, NF041486	NA	NA
UHGV-2022641_57	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-2022641_57	PHROG	phrog_67	DNA methyltransferase	other
UHGV-2022641_57	UniRef90	UniRef90_A8RGI6	Methyltransferase	NA
UHGV-2022641_57	eggNOG-mapper	411902.CLOBOL_00154	DNA methylase	NA
UHGV-2022641_57	PADLOC	MTase_II_00037	Type II methyltransferase	RM
UHGV-2022641_57	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-2022641_57	COG	COG0863	DNA modification methylase	NA
UHGV-2022641_57	Structural annotation	PF01555, MF_01872, NF008572, COG0863	NA	NA
UHGV-2022641_58	eggNOG-mapper	1235792.C808_01552	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2022641_62	PHROG	phrog_3240	NA	unknown function
UHGV-2022641_62	eggNOG-mapper	1158604.I591_00517	NA	NA
UHGV-2022641_64	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2022641_64	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2022641_64	UniRef90	UniRef90_A0A7X5D9A0	XRE family transcriptional regulator	NA
UHGV-2022641_64	eggNOG-mapper	411468.CLOSCI_01457	Helix-turn-helix XRE-family like proteins	NA
UHGV-2022641_64	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2022641_64	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2022641_64	Structural annotation	PF12844, MF_02017, NF007257, COG1476	NA	NA
UHGV-2022641_65	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2022641_65	PHROG	phrog_95	integrase	integration and excision
UHGV-2022641_65	UniRef90	UniRef90_A0A7X5D9A1	Resolvase/invertase-type recombinase catalytic domain-containing protein	NA
UHGV-2022641_65	eggNOG-mapper	1235800.C819_00524	Resolvase, N terminal domain	NA
UHGV-2022641_65	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2022641_65	Pfam	PF07508	Recombinase	Recombinase
UHGV-2022641_65	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-2022641_65	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2022641_65	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-2022641_66	COG	COG4962	Pilus assembly protein, ATPase of CpaF family	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2022641	Yes	41,093 bps	49.02%	99.90%	0.9797
UHGV-1378286	No	41,163 bps	49.10%	99.90%	0.9800
UHGV-1505338	No	35,144 bps	48.94%	91.17%	0.9807