vOTU-013657

Overview

vOTU representative UHGV-1520820

No. of genomes 4

Genome length 38,484 bps

Completeness 99.90% (high-quality)

Host CAG-508

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-013657
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-07373 › vGENUS-20337 › vSUBGEN-39979 › vOTU-013657
Host taxonomy	Bacteria › Firmicutes A › Clostridia › TANB77 › CAG-508
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1520820
BioSample	SAMEA2042658
Genome length	38,484 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	67
CDS density	90.79%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1520820_1	KOfam	K14059	int; integrase	NA
UHGV-1520820_1	PHROG	phrog_1	integrase	integration and excision
UHGV-1520820_1	UniRef90	UniRef90_A0A1Q6L7V2	Tyr recombinase domain-containing protein	NA
UHGV-1520820_1	eggNOG-mapper	552396.HMPREF0863_00330	Belongs to the 'phage' integrase family	NA
UHGV-1520820_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1520820_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1520820_1	Structural annotation	PF00589, MF_01808, TIGR02224, COG4973	NA	NA
UHGV-1520820_2	eggNOG-mapper	218140.BPSY_1280	NA	NA
UHGV-1520820_2	Structural annotation	TIGR04165, COG3478	NA	NA
UHGV-1520820_3	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-1520820_3	eggNOG-mapper	431943.CKL_1914	TRANSCRIPTIONal	NA
UHGV-1520820_3	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-1520820_3	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-1520820_3	Structural annotation	PF00717, PF15943, MF_00015, TIGR00498, COG2932	NA	NA
UHGV-1520820_4	eggNOG-mapper	926561.KB900624_gene2590	NA	NA
UHGV-1520820_4	Structural annotation	PF05339, NF007271, COG3655	NA	NA
UHGV-1520820_5	PHROG	phrog_6058	NA	unknown function
UHGV-1520820_5	eggNOG-mapper	875454.BAEW01000002_gene501	NA	NA
UHGV-1520820_5	Structural annotation	PF12728, NF033787	NA	NA
UHGV-1520820_8	Structural annotation	PF17261	NA	NA
UHGV-1520820_9	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1520820_9	UniRef90	UniRef90_A0A1C5PRT3	Putative phage-type endonuclease	NA
UHGV-1520820_9	eggNOG-mapper	742765.HMPREF9457_02105	YqaJ viral recombinase family	NA
UHGV-1520820_9	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-1520820_9	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-1520820_9	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-1520820_9	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-1520820_10	eggNOG-mapper	1203606.HMPREF1526_00240	NA	NA
UHGV-1520820_11	PHROG	phrog_674	NA	unknown function
UHGV-1520820_11	UniRef90	UniRef90_A0A388TDB0	NA	NA
UHGV-1520820_11	eggNOG-mapper	1121441.AUCX01000014_gene537	NA	NA
UHGV-1520820_11	Pfam	PF07083	NA	DUF1351
UHGV-1520820_11	Structural annotation	PF07083	NA	NA
UHGV-1520820_12	KOfam	K06416	spoVS; stage V sporulation protein S	NA
UHGV-1520820_12	PHROG	phrog_35646	sporulation protein	moron, auxiliary metabolic gene and host takeover
UHGV-1520820_12	UniRef90	UniRef90_R7F9A3	Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	NA
UHGV-1520820_12	eggNOG-mapper	1292035.H476_2620	stage v sporulation protein s	NA
UHGV-1520820_12	Pfam	PF04232	Stage V sporulation protein S (SpoVS)	SpoVS
UHGV-1520820_12	COG	COG2359	Stage V sporulation protein SpoVS, predicted DNA-binding, AlbA superfamily	NA
UHGV-1520820_12	Structural annotation	PF04232, MF_01122, NF003088, COG2359	NA	NA
UHGV-1520820_14	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-1520820_14	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1520820_14	UniRef90	UniRef90_UPI001D07E17A	recombinase RecT	NA
UHGV-1520820_14	eggNOG-mapper	742765.HMPREF9457_02107	RecT family	NA
UHGV-1520820_14	Pfam	PF03837	RecT family	RecT
UHGV-1520820_14	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-1520820_14	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1520820_14	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-1520820_15	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-1520820_15	UniRef90	UniRef90_A0A6H1ZB78	Putative replication protein	NA
UHGV-1520820_15	eggNOG-mapper	97138.C820_00775	DnaD domain protein	NA
UHGV-1520820_15	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1520820_15	Structural annotation	PF09681, MF_01177, TIGR01714, COG0640	NA	NA
UHGV-1520820_19	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1520820_19	UniRef90	UniRef90_R7FJI5	PF06356 family protein	NA
UHGV-1520820_19	eggNOG-mapper	1347392.CCEZ01000043_gene417	NA	NA
UHGV-1520820_19	Pfam	PF06356	NA	DUF1064
UHGV-1520820_19	Structural annotation	PF06356, MF_04160, NF033179	NA	NA
UHGV-1520820_20	PHROG	phrog_7445	NA	unknown function
UHGV-1520820_20	eggNOG-mapper	1232449.BAHV02000018_gene1541	PcfK-like protein	NA
UHGV-1520820_20	Pfam	PF14058	PcfK-like protein	PcfK
UHGV-1520820_21	PHROG	phrog_8470	NA	unknown function
UHGV-1520820_21	UniRef90	UniRef90_UPI00156DB36C	PcfJ domain-containing protein	NA
UHGV-1520820_21	eggNOG-mapper	1117108.PAALTS15_13637	PcfJ-like protein	NA
UHGV-1520820_21	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-1520820_21	Structural annotation	PF14284	NA	NA
UHGV-1520820_22	Pfam	PF12664	NA	DUF3789
UHGV-1520820_26	PHROG	phrog_625	NA	unknown function
UHGV-1520820_26	UniRef90	UniRef90_A0A395V9H0	ASCH domain-containing protein	NA
UHGV-1520820_26	eggNOG-mapper	397290.C810_01502	NA	NA
UHGV-1520820_26	Structural annotation	PF12961	NA	NA
UHGV-1520820_31	eggNOG-mapper	357276.EL88_12665	NA	NA
UHGV-1520820_32	PHROG	phrog_1558	NA	unknown function
UHGV-1520820_32	UniRef90	UniRef90_A0A6P1YDM0	Sigma70_r4_2 domain-containing protein	NA
UHGV-1520820_32	eggNOG-mapper	588581.Cpap_1280	NA	NA
UHGV-1520820_32	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-1520820_32	Structural annotation	TIGR01637, COG2739	NA	NA
UHGV-1520820_33	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-1520820_33	PHROG	phrog_498	DNA methyltransferase	other
UHGV-1520820_33	UniRef90	UniRef90_A0A412NGD5	ParB domain-containing protein	NA
UHGV-1520820_33	eggNOG-mapper	1120978.KB894081_gene102	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-1520820_33	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-1520820_33	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-1520820_33	COG	COG0863	DNA modification methylase	NA
UHGV-1520820_33	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-1520820_34	PHROG	phrog_13321	NA	unknown function
UHGV-1520820_34	UniRef90	UniRef90_A0A316L5W6	Radical SAM protein	NA
UHGV-1520820_34	eggNOG-mapper	748224.HMPREF9436_03343	DNA photolyase activity	NA
UHGV-1520820_34	COG	COG1533	DNA repair photolyase	NA
UHGV-1520820_34	Structural annotation	PF20903, MF_00660, NF033668, COG1180	NA	NA
UHGV-1520820_35	PHROG	phrog_1889	terminase small subunit	head and packaging
UHGV-1520820_35	UniRef90	UniRef90_R5ZAG3	Phage-related terminase small subunit YqaS	NA
UHGV-1520820_35	eggNOG-mapper	1158609.I586_00076	Phage terminase small subunit	NA
UHGV-1520820_35	COG	COG5484	NA	NA
UHGV-1520820_35	Structural annotation	PF06056, NF040785, COG5484	NA	NA
UHGV-1520820_36	eggNOG-mapper	1292035.H476_1019	Phage terminase large subunit	NA
UHGV-1520820_36	COG	COG1783	Phage terminase large subunit	NA
UHGV-1520820_37	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1520820_37	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1520820_37	UniRef90	UniRef90_A0A0M1V0L9	Terminase_3 domain-containing protein	NA
UHGV-1520820_37	eggNOG-mapper	1292035.H476_1019	Phage terminase large subunit	NA
UHGV-1520820_37	COG	COG1783	Phage terminase large subunit	NA
UHGV-1520820_37	Structural annotation	PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1520820_38	PHROG	phrog_533	portal protein	head and packaging
UHGV-1520820_38	UniRef90	UniRef90_UPI001D0FF9EC	phage portal protein	NA
UHGV-1520820_38	eggNOG-mapper	545697.HMPREF0216_02845	NA	NA
UHGV-1520820_38	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1520820_38	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1520820_39	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1520820_39	UniRef90	UniRef90_UPI000C06AD72	polymorphic toxin type 50 domain-containing protein	NA
UHGV-1520820_39	eggNOG-mapper	663278.Ethha_0091	NA	NA
UHGV-1520820_39	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1520820_39	COG	COG2369	NA	NA
UHGV-1520820_39	Structural annotation	PF06152, PF12636	NA	NA
UHGV-1520820_40	PHROG	phrog_34144	NA	unknown function
UHGV-1520820_40	UniRef90	UniRef90_R6AQU3	Conserved protein	NA
UHGV-1520820_40	eggNOG-mapper	1064535.MELS_1696	NA	NA
UHGV-1520820_40	Structural annotation	PF20111	NA	NA
UHGV-1520820_42	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1520820_42	UniRef90	UniRef90_R6XV28	Phage minor structural protein GP20	NA
UHGV-1520820_42	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1520820_42	Structural annotation	PF06810	NA	NA
UHGV-1520820_43	PHROG	phrog_212	major head protein	head and packaging
UHGV-1520820_43	UniRef90	UniRef90_A0A416DTJ6	Phage capsid protein	NA
UHGV-1520820_43	eggNOG-mapper	318464.IO99_00580	NA	NA
UHGV-1520820_43	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-1520820_44	PHROG	phrog_10541	NA	unknown function
UHGV-1520820_45	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1520820_45	eggNOG-mapper	1449050.JNLE01000003_gene3888	NA	NA
UHGV-1520820_46	PHROG	phrog_3366	NA	unknown function
UHGV-1520820_46	eggNOG-mapper	632245.CLP_1651	NA	NA
UHGV-1520820_46	Pfam	PF20536	NA	DUF6751
UHGV-1520820_46	Structural annotation	PF20536, TIGR02126	NA	NA
UHGV-1520820_47	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1520820_47	UniRef90	UniRef90_UPI0019D0AD4B	minor capsid protein	NA
UHGV-1520820_47	eggNOG-mapper	645991.Sgly_0344	NA	NA
UHGV-1520820_47	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1520820_47	Structural annotation	PF11114	NA	NA
UHGV-1520820_48	PHROG	phrog_3266	tail completion	connector
UHGV-1520820_48	UniRef90	UniRef90_UPI000D830B30	chloramphenicol resistance protein	NA
UHGV-1520820_48	eggNOG-mapper	1280692.AUJL01000004_gene841	NA	NA
UHGV-1520820_48	Structural annotation	PF12691	NA	NA
UHGV-1520820_49	PHROG	phrog_3099	NA	unknown function
UHGV-1520820_49	eggNOG-mapper	469596.HMPREF9488_01325	NA	NA
UHGV-1520820_49	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1520820_50	Structural annotation	PF10666	NA	NA
UHGV-1520820_51	PHROG	phrog_706	NA	unknown function
UHGV-1520820_51	UniRef90	UniRef90_UPI00067E77F7	Gp15 family bacteriophage protein	NA
UHGV-1520820_51	eggNOG-mapper	469596.HMPREF9488_01327	Bacteriophage Gp15 protein	NA
UHGV-1520820_51	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1520820_51	Structural annotation	PF06854	NA	NA
UHGV-1520820_52	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1520820_52	eggNOG-mapper	86416.Clopa_0587	phage tail tape measure protein	NA
UHGV-1520820_52	COG	COG1511	NA	NA
UHGV-1520820_53	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1520820_53	UniRef90	UniRef90_A0A4V0AA82	TMP repeat family	NA
UHGV-1520820_53	eggNOG-mapper	1280692.AUJL01000027_gene2150	phage tail tape measure protein	NA
UHGV-1520820_53	COG	COG1511	NA	NA
UHGV-1520820_54	PHROG	phrog_1194	NA	unknown function
UHGV-1520820_54	eggNOG-mapper	1120746.CCNL01000014_gene2106	NA	NA
UHGV-1520820_54	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1520820_55	PHROG	phrog_13879	NA	unknown function
UHGV-1520820_55	eggNOG-mapper	1120746.CCNL01000014_gene2107	NA	NA
UHGV-1520820_55	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-1520820_56	PHROG	phrog_18725	NA	unknown function
UHGV-1520820_56	eggNOG-mapper	1120746.CCNL01000014_gene2212	NA	NA
UHGV-1520820_57	PHROG	phrog_7037	tail fiber protein	tail
UHGV-1520820_57	UniRef90	UniRef90_A0A1G6NQ88	NA	NA
UHGV-1520820_57	eggNOG-mapper	1321782.HMPREF1986_02279	COG NOG18825 non supervised orthologous group	NA
UHGV-1520820_57	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-1520820_57	Pfam	PF19789	NA	DUF6273
UHGV-1520820_57	Structural annotation	PF12571, PF19789	NA	NA
UHGV-1520820_58	eggNOG-mapper	411460.RUMTOR_01328	NA	NA
UHGV-1520820_58	Structural annotation	PF05635, NF008912	NA	NA
UHGV-1520820_59	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-1520820_59	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-1520820_59	UniRef90	UniRef90_A0A1Y4IDW2	Reverse transcriptase domain-containing protein	NA
UHGV-1520820_59	eggNOG-mapper	1235802.C823_01102	Reverse transcriptase	NA
UHGV-1520820_59	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-1520820_59	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-1520820_59	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-1520820_59	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-1520820_60	eggNOG-mapper	742740.HMPREF9474_02256	NA	NA
UHGV-1520820_61	PHROG	phrog_134	NA	unknown function
UHGV-1520820_61	UniRef90	UniRef90_A0A1Q6L3Q4	AraC family transcriptional regulator	NA
UHGV-1520820_61	eggNOG-mapper	1298920.KI911353_gene543	Phage uncharacterised protein (Phage_XkdX)	NA
UHGV-1520820_61	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-1520820_61	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-1520820_62	PHROG	phrog_1863	NA	unknown function
UHGV-1520820_62	eggNOG-mapper	411468.CLOSCI_01509	NA	NA
UHGV-1520820_65	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-1520820_65	PHROG	phrog_3088	amidase	lysis
UHGV-1520820_65	UniRef90	UniRef90_R7FK28	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1520820_65	eggNOG-mapper	315730.BcerKBAB4_3412	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1520820_65	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1520820_65	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-1520820_65	COG	COG3103	NA	NA
UHGV-1520820_65	Structural annotation	PF01510, PF08230, NF008758, COG5632	NA	NA
UHGV-1520820_66	KOfam	K03555	mutS; DNA mismatch repair protein MutS	NA
UHGV-1520820_66	UniRef90	UniRef90_A0A1Q6L3U2	MutS_I domain-containing protein	NA
UHGV-1520820_66	eggNOG-mapper	1121104.AQXH01000001_gene1842	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	NA
UHGV-1520820_66	Pfam	PF01624	MutS domain I	MutS_I
UHGV-1520820_66	COG	COG0249	DNA mismatch repair ATPase MutS	NA
UHGV-1520820_66	Structural annotation	PF01624, NF006536	NA	NA
UHGV-1520820_67	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-1520820_67	UniRef90	UniRef90_A0A1Q6L450	HTH cro/C1-type domain-containing protein	NA
UHGV-1520820_67	eggNOG-mapper	397291.C804_02758	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1520820_67	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-1520820_67	Structural annotation	PF13443, NF000090, COG3655	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1520820	Yes	38,484 bps	27.60%	99.90%	0.9733
UHGV-1500563	No	39,917 bps	27.42%	99.90%	0.9731
UHGV-0049869	No	37,463 bps	27.47%	98.70%	0.9705
UHGV-1592441	No	17,918 bps	27.57%	47.89%	0.9776