vOTU-013701

Overview

vOTU representative UHGV-1930550

No. of genomes 7

Genome length 39,157 bps

Completeness 95.59% (high-quality)

Host Oscillospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-013701
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-03646 › vGENUS-18873 › vSUBGEN-36144 › vOTU-013701
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1930550
BioSample	NA
Genome length	39,157 bps
CheckV completeness	95.59% (high-quality)
CheckV contamination	0.00%
CDS count	59
CDS density	91.32%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1930550_1	eggNOG-mapper	742738.HMPREF9460_03967	NA	NA
UHGV-1930550_2	PHROG	phrog_134	NA	unknown function
UHGV-1930550_2	UniRef90	UniRef90_A0A8J6J965	XkdX family protein	NA
UHGV-1930550_2	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-1930550_2	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-1930550_3	eggNOG-mapper	1519439.JPJG01000060_gene1895	NA	NA
UHGV-1930550_3	Structural annotation	PF10618	NA	NA
UHGV-1930550_4	Structural annotation	PF13859, MF_01195, TIGR03548, COG3055	NA	NA
UHGV-1930550_6	PHROG	phrog_13589	NA	unknown function
UHGV-1930550_6	eggNOG-mapper	411471.SUBVAR_06929	ATPase involved in DNA repair	NA
UHGV-1930550_6	COG	COG0419	DNA repair exonuclease SbcCD ATPase subunit	NA
UHGV-1930550_8	PHROG	phrog_1084	NA	unknown function
UHGV-1930550_8	Structural annotation	PF16407, NF032891, COG5456	NA	NA
UHGV-1930550_10	PHROG	phrog_32744	NA	unknown function
UHGV-1930550_10	eggNOG-mapper	1120998.AUFC01000030_gene2247	NA	NA
UHGV-1930550_10	Structural annotation	PF14594, PF21722, NF033848, COG4379	NA	NA
UHGV-1930550_11	PHROG	phrog_1194	NA	unknown function
UHGV-1930550_11	eggNOG-mapper	1120998.AUFC01000030_gene2246	NA	NA
UHGV-1930550_11	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-1930550_12	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1930550_12	eggNOG-mapper	693746.OBV_18190	domain protein	NA
UHGV-1930550_12	COG	COG1511	NA	NA
UHGV-1930550_12	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-1930550_13	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-1930550_14	PHROG	phrog_706	NA	unknown function
UHGV-1930550_14	UniRef90	UniRef90_UPI000682A80B	Gp15 family bacteriophage protein	NA
UHGV-1930550_14	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-1930550_14	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-1930550_14	Structural annotation	PF06854	NA	NA
UHGV-1930550_15	PHROG	phrog_11299	NA	unknown function
UHGV-1930550_15	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-1930550_15	Structural annotation	PF10666	NA	NA
UHGV-1930550_16	PHROG	phrog_3099	NA	unknown function
UHGV-1930550_16	eggNOG-mapper	1232443.BAIA02000078_gene23	NA	NA
UHGV-1930550_16	Structural annotation	PF10772, TIGR02126, COG3499	NA	NA
UHGV-1930550_17	PHROG	phrog_3266	tail completion	connector
UHGV-1930550_17	eggNOG-mapper	693746.OBV_18140	NA	NA
UHGV-1930550_17	Structural annotation	PF08873	NA	NA
UHGV-1930550_18	PHROG	phrog_556	minor head protein	head and packaging
UHGV-1930550_18	UniRef90	UniRef90_UPI00164EC49A	minor capsid protein	NA
UHGV-1930550_18	eggNOG-mapper	33035.JPJF01000106_gene3128	NA	NA
UHGV-1930550_18	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-1930550_18	Structural annotation	PF11114	NA	NA
UHGV-1930550_19	Structural annotation	PF20536, MF_01370, TIGR02126	NA	NA
UHGV-1930550_20	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1930550_20	eggNOG-mapper	693746.OBV_18110	NA	NA
UHGV-1930550_21	PHROG	phrog_212	major head protein	head and packaging
UHGV-1930550_21	UniRef90	UniRef90_A0A8J6JGV9	Phage capsid protein	NA
UHGV-1930550_21	eggNOG-mapper	935836.JAEL01000021_gene1494	NA	NA
UHGV-1930550_21	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-1930550_22	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-1930550_22	UniRef90	UniRef90_UPI00164D9F94	phage scaffolding protein	NA
UHGV-1930550_22	eggNOG-mapper	693746.OBV_18080	COG NOG36366 non supervised orthologous group	NA
UHGV-1930550_22	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-1930550_22	Structural annotation	PF06810	NA	NA
UHGV-1930550_23	PHROG	phrog_3675	NA	unknown function
UHGV-1930550_23	UniRef90	UniRef90_J5UL11	YjcQ protein	NA
UHGV-1930550_23	eggNOG-mapper	936375.HMPREF1152_1073	YjcQ protein	NA
UHGV-1930550_23	Pfam	PF09639	YjcQ protein	YjcQ
UHGV-1930550_23	Structural annotation	PF09639, TIGR04176, COG2345	NA	NA
UHGV-1930550_24	eggNOG-mapper	663278.Ethha_0498	NA	NA
UHGV-1930550_25	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1930550_25	UniRef90	UniRef90_UPI0006814CA4	phage minor capsid protein	NA
UHGV-1930550_25	eggNOG-mapper	693746.OBV_18050	Phage minor capsid protein 2	NA
UHGV-1930550_25	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1930550_25	COG	COG2369	NA	NA
UHGV-1930550_25	Structural annotation	PF06152, PF12636	NA	NA
UHGV-1930550_26	PHROG	phrog_533	portal protein	head and packaging
UHGV-1930550_26	UniRef90	UniRef90_UPI000680A1DB	phage portal protein	NA
UHGV-1930550_26	eggNOG-mapper	693746.OBV_18040	NA	NA
UHGV-1930550_26	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1930550_28	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1930550_28	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-1930550_28	UniRef90	UniRef90_A0A8J6J2G9	PBSX family phage terminase large subunit	NA
UHGV-1930550_28	eggNOG-mapper	665956.HMPREF1032_02957	Phage terminase, large subunit, PBSX family	NA
UHGV-1930550_28	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1930550_28	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-1930550_28	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1930550_28	COG	COG1783	Phage terminase large subunit	NA
UHGV-1930550_28	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1930550_29	PHROG	phrog_2412	NA	unknown function
UHGV-1930550_29	UniRef90	UniRef90_UPI000CF51FBE	KGG domain-containing protein	NA
UHGV-1930550_29	eggNOG-mapper	1232449.BAHV02000018_gene1532	NA	NA
UHGV-1930550_30	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1930550_30	UniRef90	UniRef90_A0A8J6J9G8	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-1930550_30	eggNOG-mapper	439292.Bsel_0778	NA	NA
UHGV-1930550_30	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-1930550_30	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-1930550_30	Structural annotation	PF04545, MF_00674, NF009180, COG1342	NA	NA
UHGV-1930550_31	Structural annotation	PF19070	NA	NA
UHGV-1930550_34	PHROG	phrog_21034	NA	unknown function
UHGV-1930550_34	eggNOG-mapper	379066.GAU_1809	NA	NA
UHGV-1930550_35	PHROG	phrog_874	NA	unknown function
UHGV-1930550_35	UniRef90	UniRef90_A0A4P6LRJ9	ASCH domain-containing protein	NA
UHGV-1930550_35	eggNOG-mapper	1232449.BAHV02000016_gene1832	NA	NA
UHGV-1930550_35	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-1930550_38	PHROG	phrog_7839	NA	unknown function
UHGV-1930550_38	eggNOG-mapper	665956.HMPREF1032_03091	NA	NA
UHGV-1930550_38	Structural annotation	PF08860	NA	NA
UHGV-1930550_39	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-1930550_39	Structural annotation	PF04936, NF033558	NA	NA
UHGV-1930550_40	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-1930550_40	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1930550_40	UniRef90	UniRef90_UPI0018A058D6	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-1930550_40	eggNOG-mapper	742738.HMPREF9460_01358	Endodeoxyribonuclease RusA	NA
UHGV-1930550_40	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-1930550_40	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-1930550_40	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-1930550_41	KOfam	K07505	repA; regulatory protein RepA	NA
UHGV-1930550_41	PHROG	phrog_2597	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-1930550_41	UniRef90	UniRef90_UPI0018A0FC0D	AAA family ATPase	NA
UHGV-1930550_41	eggNOG-mapper	411462.DORLON_00808	Primase C terminal 2 (PriCT-2)	NA
UHGV-1930550_41	Pfam	PF08707	Primase C terminal 2 (PriCT-2)	PriCT_2
UHGV-1930550_41	Pfam	PF13481	AAA domain	AAA_25
UHGV-1930550_41	COG	COG3598	RecA-family ATPase	NA
UHGV-1930550_41	Structural annotation	PF13481, PF16793, PF08220, MF_00350, MF_00700, NF006606, NF001641, COG3598, COG3285	NA	NA
UHGV-1930550_42	KOfam	K17677	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	NA
UHGV-1930550_42	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-1930550_42	UniRef90	UniRef90_UPI00189FE75B	DEAD/DEAH box helicase	NA
UHGV-1930550_42	eggNOG-mapper	1235792.C808_05388	helicase superfamily c-terminal domain	NA
UHGV-1930550_42	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-1930550_42	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-1930550_42	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-1930550_42	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-1930550_42	Structural annotation	PF04851, PF16203, MF_01489, NF008521, COG1061	NA	NA
UHGV-1930550_43	PHROG	phrog_2698	NA	unknown function
UHGV-1930550_43	UniRef90	UniRef90_UPI0018A0CF19	NA	NA
UHGV-1930550_43	eggNOG-mapper	394503.Ccel_3308	NA	NA
UHGV-1930550_43	Structural annotation	PF05037	NA	NA
UHGV-1930550_44	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1930550_44	UniRef90	UniRef90_UPI0018A1021B	ATP-binding protein	NA
UHGV-1930550_44	eggNOG-mapper	645991.Sgly_0321	AAA domain	NA
UHGV-1930550_44	Pfam	PF13479	AAA domain	AAA_24
UHGV-1930550_44	Structural annotation	PF13479, MF_00268, TIGR01618, COG0468	NA	NA
UHGV-1930550_45	KOfam	K03546	sbcC, rad50; DNA repair protein SbcC/Rad50	NA
UHGV-1930550_45	PHROG	phrog_1499	NA	unknown function
UHGV-1930550_45	UniRef90	UniRef90_UPI00189C91C8	ATP-binding protein	NA
UHGV-1930550_45	eggNOG-mapper	645991.Sgly_0320	domain protein	NA
UHGV-1930550_45	Pfam	PF13476	AAA domain	AAA_23
UHGV-1930550_45	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1930550_45	Structural annotation	PF11398, MF_00365, TIGR00634, COG0497	NA	NA
UHGV-1930550_46	PHROG	phrog_1029	NA	unknown function
UHGV-1930550_46	eggNOG-mapper	1203606.HMPREF1526_01890	NA	NA
UHGV-1930550_46	Structural annotation	PF10065, COG5532	NA	NA
UHGV-1930550_47	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-1930550_47	UniRef90	UniRef90_R6MCS9	NA	NA
UHGV-1930550_47	eggNOG-mapper	552398.HMPREF0866_01626	NA	NA
UHGV-1930550_48	PHROG	phrog_19349	NA	unknown function
UHGV-1930550_48	UniRef90	UniRef90_A0A8J6J9H8	Lytic transglycosylase domain-containing protein	NA
UHGV-1930550_48	eggNOG-mapper	246194.CHY_0404	PFAM Lytic transglycosylase catalytic	NA
UHGV-1930550_48	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-1930550_48	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-1930550_48	Structural annotation	PF01464, MF_01616, NF011856, COG0741	NA	NA
UHGV-1930550_50	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1930550_50	eggNOG-mapper	693746.OBV_43240	NA	NA
UHGV-1930550_50	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1930550_50	Structural annotation	PF01507, MF_00064, NF010367, COG0175	NA	NA
UHGV-1930550_55	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-1930550_55	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-1930550_55	UniRef90	UniRef90_A0A3E2U242	Helix-turn-helix domain-containing protein	NA
UHGV-1930550_55	eggNOG-mapper	1120978.KB894087_gene408	Cro/C1-type HTH DNA-binding domain	NA
UHGV-1930550_55	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1930550_55	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1930550_56	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-1930550_56	UniRef90	UniRef90_A0A498D1Q4	XRE family transcriptional regulator	NA
UHGV-1930550_56	eggNOG-mapper	35344.A0A097PBE5_BPT12	Peptidase S24-like	NA
UHGV-1930550_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1930550_56	Structural annotation	PF01381, MF_02017, NF041951, COG1396	NA	NA
UHGV-1930550_58	UniRef90	UniRef90_UPI001956EF77	stalk domain-containing protein	NA
UHGV-1930550_58	eggNOG-mapper	1297617.JPJD01000001_gene2682	Peptidase propeptide and YPEB domain protein	NA
UHGV-1930550_58	Pfam	PF07833	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
UHGV-1930550_58	COG	COG3212	PepSY domain containing protein, regulator of zincin peptidase activity	NA
UHGV-1930550_59	KOfam	K14059	int; integrase	NA
UHGV-1930550_59	PHROG	phrog_1	integrase	integration and excision
UHGV-1930550_59	UniRef90	UniRef90_A0A8J6JEJ8	Site-specific integrase	NA
UHGV-1930550_59	eggNOG-mapper	742738.HMPREF9460_01344	Phage integrase family	NA
UHGV-1930550_59	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1930550_59	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1930550_59	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1930550	Yes	39,157 bps	54.25%	95.59%	0.9761
UHGV-1504713	No	37,476 bps	54.38%	91.19%	0.9738
UHGV-1923215	No	24,149 bps	53.32%	57.68%	0.9805
UHGV-1726133	No	15,229 bps	54.80%	37.35%	0.9777
UHGV-1800169	No	12,872 bps	54.87%	31.58%	0.9802
UHGV-1626837	No	11,332 bps	55.35%	27.83%	0.9763
UHGV-2192255	No	10,124 bps	55.61%	24.84%	0.9806