vOTU-013747

Overview

vOTU representative UHGV-2001720

No. of genomes 3

Genome length 40,754 bps

Completeness 99.90% (high-quality)

Host Veillonella parvula A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-013747
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00086 › vGENUS-00106 › vSUBGEN-01410 › vOTU-013747
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Veillonellaceae › Veillonella › Veillonella parvula A
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2001720
BioSample	SAMEA2580138
Genome length	40,754 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	49
CDS density	93.51%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2001720_2	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2001720_2	PHROG	phrog_435	endolysin	lysis
UHGV-2001720_2	UniRef90	UniRef90_A0A2S7ZCP6	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2001720_2	eggNOG-mapper	546273.VEIDISOL_00739	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2001720_2	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-2001720_2	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2001720_2	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-2001720_3	PHROG	phrog_27828	NA	unknown function
UHGV-2001720_3	UniRef90	UniRef90_F5KZP5	Conserved domain protein	NA
UHGV-2001720_3	eggNOG-mapper	546273.VEIDISOL_00738	NA	NA
UHGV-2001720_5	PHROG	phrog_22483	NA	unknown function
UHGV-2001720_5	UniRef90	UniRef90_A0A563DAK6	Lysyl-tRNA synthetase	NA
UHGV-2001720_5	eggNOG-mapper	706434.HMPREF9429_00509	NA	NA
UHGV-2001720_5	Structural annotation	PF17936, NF033814	NA	NA
UHGV-2001720_6	PHROG	phrog_1084	NA	unknown function
UHGV-2001720_6	Structural annotation	PF17813, NF038186	NA	NA
UHGV-2001720_7	PHROG	phrog_25213	NA	unknown function
UHGV-2001720_8	PHROG	phrog_2427	NA	unknown function
UHGV-2001720_9	PHROG	phrog_31	baseplate hub protein Tal	tail
UHGV-2001720_9	UniRef90	UniRef90_F5KZP0	Fibronectin type III domain protein	NA
UHGV-2001720_9	eggNOG-mapper	1128111.HMPREF0870_01756	gp58-like protein	NA
UHGV-2001720_9	Pfam	PF13550	Putative phage tail protein	Phage-tail_3
UHGV-2001720_9	Pfam	PF00041	Fibronectin type III domain	fn3
UHGV-2001720_9	NCBIFam	NF040662.1	host specificity factor TipJ family phage tail protein	NA
UHGV-2001720_9	COG	COG1511	NA	NA
UHGV-2001720_9	Structural annotation	PF13550, PF00041, PF09294, PF17936, PF14109, NF040662, NF041335, COG4733	NA	NA
UHGV-2001720_10	KOfam	K13695	nlpC; probable lipoprotein NlpC	NA
UHGV-2001720_10	PHROG	phrog_329	minor tail protein	tail
UHGV-2001720_10	UniRef90	UniRef90_UPI00068174D5	NlpC/P60 family protein	NA
UHGV-2001720_10	eggNOG-mapper	1128111.HMPREF0870_01757	cysteine-type peptidase activity	NA
UHGV-2001720_10	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-2001720_10	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-2001720_10	Structural annotation	PF00877, NF008096, COG3234	NA	NA
UHGV-2001720_11	PHROG	phrog_18	minor tail protein	tail
UHGV-2001720_11	UniRef90	UniRef90_A0A380N670	Phage minor tail protein L	NA
UHGV-2001720_11	eggNOG-mapper	1128111.HMPREF0870_01758	Phage minor tail protein L	NA
UHGV-2001720_11	Pfam	PF05100	Phage minor tail protein L	Phage_tail_L
UHGV-2001720_11	COG	COG4672	Phage tail protein	NA
UHGV-2001720_11	Structural annotation	PF08875, TIGR01600, COG4672	NA	NA
UHGV-2001720_12	PHROG	phrog_22443	NA	unknown function
UHGV-2001720_12	UniRef90	UniRef90_F5KZN7	Phage tail tape measure protein, lambda family	NA
UHGV-2001720_12	eggNOG-mapper	1128111.HMPREF0870_01760	Putative exonuclease SbcCD, C subunit	NA
UHGV-2001720_12	Pfam	PF09718	Lambda phage tail tape-measure protein (Tape_meas_lam_C)	Tape_meas_lam_C
UHGV-2001720_12	COG	COG4913	NA	NA
UHGV-2001720_12	Structural annotation	PF20155, PF06120, TIGR02338, TIGR01541, COG5281	NA	NA
UHGV-2001720_13	PHROG	phrog_23549	NA	unknown function
UHGV-2001720_13	UniRef90	UniRef90_F5KZN6	Conserved domain protein	NA
UHGV-2001720_14	PHROG	phrog_27248	NA	unknown function
UHGV-2001720_15	PHROG	phrog_290	minor tail protein	tail
UHGV-2001720_15	UniRef90	UniRef90_UPI001E4C5382	phage tail tube protein	NA
UHGV-2001720_15	eggNOG-mapper	1128111.HMPREF0870_01763	NA	NA
UHGV-2001720_15	Pfam	PF18906	Phage tail tube protein	Phage_tube_2
UHGV-2001720_15	Structural annotation	PF18906, TIGR02241, TIGR02126, COG5437, COG3498	NA	NA
UHGV-2001720_16	PHROG	phrog_17431	NA	unknown function
UHGV-2001720_16	eggNOG-mapper	1128111.HMPREF0870_01764	NA	NA
UHGV-2001720_16	Structural annotation	PF20765, COG5003	NA	NA
UHGV-2001720_17	PHROG	phrog_222	tail protein	tail
UHGV-2001720_17	UniRef90	UniRef90_F5KZN2	Conserved domain protein	NA
UHGV-2001720_17	eggNOG-mapper	1128111.HMPREF0870_01765	NA	NA
UHGV-2001720_17	Structural annotation	PF05069, TIGR01725	NA	NA
UHGV-2001720_18	PHROG	phrog_27032	NA	unknown function
UHGV-2001720_18	Structural annotation	PF05354, TIGR01563, COG5614	NA	NA
UHGV-2001720_19	PHROG	phrog_122	head decoration	head and packaging
UHGV-2001720_19	UniRef90	UniRef90_UPI0007C895B4	NA	NA
UHGV-2001720_19	eggNOG-mapper	484770.UFO1_2460	NA	NA
UHGV-2001720_19	Pfam	PF09956	NA	DUF2190
UHGV-2001720_19	COG	COG5471	Predicted phage recombinase, RecA/RadA family	NA
UHGV-2001720_19	Structural annotation	PF09956, COG5471	NA	NA
UHGV-2001720_20	KOfam	K06904	NA	NA
UHGV-2001720_20	PHROG	phrog_4523	major head and protease protein	head and packaging
UHGV-2001720_20	UniRef90	UniRef90_F5KZM9	Caudovirus prohead protease	NA
UHGV-2001720_20	eggNOG-mapper	1128111.HMPREF0870_01768	Caudovirus prohead protease	NA
UHGV-2001720_20	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-2001720_20	Pfam	PF10124	Mu-like prophage major head subunit gpT	Mu-like_gpT
UHGV-2001720_20	COG	COG3087	Cell division protein FtsN	NA
UHGV-2001720_20	Structural annotation	PF19821, PF04586, MF_04119, TIGR04387, TIGR01543, COG3740, COG4653	NA	NA
UHGV-2001720_21	PHROG	phrog_21	portal protein	head and packaging
UHGV-2001720_21	UniRef90	UniRef90_F5KZM8	Phage portal protein, lambda family	NA
UHGV-2001720_21	eggNOG-mapper	1128111.HMPREF0870_01769	Phage portal protein, lambda family	NA
UHGV-2001720_21	Pfam	PF05136	Phage portal protein, lambda family	Phage_portal_2
UHGV-2001720_21	NCBIFam	TIGR01539.1	phage portal protein	NA
UHGV-2001720_21	COG	COG5511	Phage capsid protein	NA
UHGV-2001720_21	Structural annotation	PF05136, MF_04135, TIGR01539, COG5511	NA	NA
UHGV-2001720_22	PHROG	phrog_20307	NA	unknown function
UHGV-2001720_22	UniRef90	UniRef90_F5KZM7	Conserved domain protein	NA
UHGV-2001720_22	Structural annotation	PF19645, COG1382	NA	NA
UHGV-2001720_23	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-2001720_23	PHROG	phrog_15	terminase large subunit	head and packaging
UHGV-2001720_23	UniRef90	UniRef90_E1LBM6	Phage terminase large subunit (GpA)	NA
UHGV-2001720_23	eggNOG-mapper	1128111.HMPREF0870_01771	Phage terminase large subunit (GpA)	NA
UHGV-2001720_23	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-2001720_23	Pfam	PF20454	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
UHGV-2001720_23	NCBIFam	TIGR03831.1	YgiT-type zinc finger protein	NA
UHGV-2001720_23	COG	COG5525	Phage terminase, large subunit GpA	NA
UHGV-2001720_23	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-2001720_24	PHROG	phrog_57	terminase small subunit	head and packaging
UHGV-2001720_24	eggNOG-mapper	1128111.HMPREF0870_01772	transposase activity	NA
UHGV-2001720_24	COG	COG4220	Phage DNA packaging protein, Nu1 subunit of terminase	NA
UHGV-2001720_25	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2001720_25	UniRef90	UniRef90_UPI0013DFE289	NA	NA
UHGV-2001720_25	eggNOG-mapper	1401067.HMPREF0872_06835	NA	NA
UHGV-2001720_25	Structural annotation	PF07374, TIGR01636	NA	NA
UHGV-2001720_28	PHROG	phrog_236	nucleotide kinase	other
UHGV-2001720_28	UniRef90	UniRef90_UPI00098A44D4	NA	NA
UHGV-2001720_28	eggNOG-mapper	546273.VEIDISOL_00707	NA	NA
UHGV-2001720_28	Pfam	PF11753	NA	DUF3310
UHGV-2001720_28	Structural annotation	PF11753	NA	NA
UHGV-2001720_29	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-2001720_29	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2001720_29	UniRef90	UniRef90_A0A6N2ZEW6	Helicase ATP-binding domain-containing protein	NA
UHGV-2001720_29	eggNOG-mapper	546273.VEIDISOL_00706	SNF2 family	NA
UHGV-2001720_29	PADLOC	DpdE_00010	DpdE	DPD
UHGV-2001720_29	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-2001720_29	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-2001720_29	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-2001720_29	Structural annotation	PF13872, PF16203, MF_01821, NF041790, COG0553	NA	NA
UHGV-2001720_30	PHROG	phrog_93	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2001720_30	UniRef90	UniRef90_A0A413EEJ0	VRR-NUC domain-containing protein	NA
UHGV-2001720_30	eggNOG-mapper	546273.VEIDISOL_00705	VRR_NUC	NA
UHGV-2001720_30	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-2001720_30	Structural annotation	PF01870, MF_01490, NF041423, COG1591	NA	NA
UHGV-2001720_31	PHROG	phrog_256	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2001720_31	UniRef90	UniRef90_UPI000F8E83D0	virulence-associated E family protein	NA
UHGV-2001720_31	eggNOG-mapper	546273.VEIDISOL_00704	Virulence-associated protein E	NA
UHGV-2001720_31	Pfam	PF05272	Virulence-associated protein E-like domain	VapE-like_dom
UHGV-2001720_31	COG	COG5545	Predicted P-loop ATPase and inactivated derivatives	NA
UHGV-2001720_31	Structural annotation	PF05272, NF011296, NF040562, COG5545	NA	NA
UHGV-2001720_32	PHROG	phrog_16315	NA	unknown function
UHGV-2001720_32	UniRef90	UniRef90_UPI000F8DF173	PcfJ domain-containing protein	NA
UHGV-2001720_32	eggNOG-mapper	546273.VEIDISOL_00703	PcfJ-like protein	NA
UHGV-2001720_32	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-2001720_32	Structural annotation	PF14284	NA	NA
UHGV-2001720_34	KOfam	K02334	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	NA
UHGV-2001720_34	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-2001720_34	UniRef90	UniRef90_A0A3A6W420	POLAc domain-containing protein	NA
UHGV-2001720_34	eggNOG-mapper	546273.VEIDISOL_00701	DNA polymerase	NA
UHGV-2001720_34	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-2001720_34	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-2001720_34	Structural annotation	PF00476, MF_04101, NF011540, COG0749	NA	NA
UHGV-2001720_35	PHROG	phrog_112	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2001720_35	UniRef90	UniRef90_UPI001F0CBF89	NA	NA
UHGV-2001720_35	eggNOG-mapper	546273.VEIDISOL_00700	NA	NA
UHGV-2001720_35	Pfam	PF10991	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
UHGV-2001720_35	Structural annotation	PF10991, MF_04153	NA	NA
UHGV-2001720_37	PHROG	phrog_69	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2001720_37	UniRef90	UniRef90_UPI000F8EBC86	NA	NA
UHGV-2001720_37	eggNOG-mapper	546273.VEIDISOL_00698	NA	NA
UHGV-2001720_37	Pfam	PF10926	NA	DUF2800
UHGV-2001720_37	COG	COG2887	RecB family exonuclease	NA
UHGV-2001720_37	Structural annotation	PF10926, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-2001720_39	PHROG	phrog_3489	NA	unknown function
UHGV-2001720_39	Structural annotation	PF19157	NA	NA
UHGV-2001720_41	PHROG	phrog_30876	NA	unknown function
UHGV-2001720_41	UniRef90	UniRef90_F5KZK9	Conserved domain protein	NA
UHGV-2001720_42	PHROG	phrog_6058	NA	unknown function
UHGV-2001720_42	Structural annotation	PF09035, NF033787	NA	NA
UHGV-2001720_43	UniRef90	UniRef90_A0A563DA47	XRE family transcriptional regulator	NA
UHGV-2001720_43	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2001720_43	Structural annotation	PF13443, MF_00535, TIGR03070, COG1813	NA	NA
UHGV-2001720_44	PHROG	phrog_633	transcriptional regulator	transcription regulation
UHGV-2001720_44	UniRef90	UniRef90_X8HX74	Winged helix-turn-helix DNA-binding protein	NA
UHGV-2001720_44	eggNOG-mapper	1401067.HMPREF0872_06890	NA	NA
UHGV-2001720_44	Structural annotation	PF04703, MF_00732, NF033788, COG2345	NA	NA
UHGV-2001720_45	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-2001720_45	UniRef90	UniRef90_A0A496P9T9	XRE family transcriptional regulator	NA
UHGV-2001720_45	eggNOG-mapper	718252.FP2_16270	sequence-specific DNA binding	NA
UHGV-2001720_45	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-2001720_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2001720_45	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2001720_45	Structural annotation	PF12844, NF041951, COG1476	NA	NA
UHGV-2001720_46	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2001720_46	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2001720_46	UniRef90	UniRef90_A0A496P9T2	Helix-turn-helix domain-containing protein	NA
UHGV-2001720_46	eggNOG-mapper	596315.HMPREF0634_1108	helix-turn-helix	NA
UHGV-2001720_46	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-2001720_46	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2001720_46	Pfam	PF13413	Helix-turn-helix domain	HTH_25
UHGV-2001720_46	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-2001720_46	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2001720_47	eggNOG-mapper	742743.HMPREF9453_01874	NA	NA
UHGV-2001720_47	Structural annotation	PF12007	NA	NA
UHGV-2001720_48	KOfam	K14059	int; integrase	NA
UHGV-2001720_48	PHROG	phrog_1	integrase	integration and excision
UHGV-2001720_48	UniRef90	UniRef90_A0A3A6W8L8	Site-specific integrase	NA
UHGV-2001720_48	eggNOG-mapper	1401067.HMPREF0872_03560	Belongs to the 'phage' integrase family	NA
UHGV-2001720_48	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2001720_48	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2001720_48	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2001720_49	eggNOG-mapper	479436.Vpar_1541	Belongs to the UDP-N-acetylglucosamine 2-epimerase family	NA
UHGV-2001720_49	COG	COG0381	UDP-N-acetylglucosamine 2-epimerase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2001720	Yes	40,754 bps	42.41%	99.90%	0.9806
UHGV-0070352	No	40,670 bps	42.39%	99.90%	0.9812
UHGV-1509387	No	38,548 bps	42.66%	94.58%	0.9808