vOTU-014085

Overview

No. of genomes 12

Genome length 12,188 bps

Completeness 89.21% (medium-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-014085
Number of genomes	12
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00012 › vSUBFAM-00988 › vGENUS-00900 › vSUBGEN-47963 › vOTU-014085
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2146511
BioSample	SAMEA3449281
Genome length	12,188 bps
CheckV completeness	89.21% (medium-quality)
CheckV contamination	0.00%
CDS count	14
CDS density	93.07%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2146511_4	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-2146511_4	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-2146511_4	UniRef90	UniRef90_A0A316S5V3	DNA-directed DNA polymerase	NA
UHGV-2146511_4	eggNOG-mapper	12345.Q96206_BPGA1	nucleotide binding	NA
UHGV-2146511_4	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-2146511_4	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA
UHGV-2146511_5	PHROG	phrog_2150	terminase	head and packaging
UHGV-2146511_5	UniRef90	UniRef90_A0A843GEL8	Phage DNA encapsidation protein	NA
UHGV-2146511_5	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-2146511_5	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-2146511_6	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-2146511_9	PHROG	phrog_2038	upper collar connector	connector
UHGV-2146511_9	UniRef90	UniRef90_A0A2Z4GUB7	Upper collar protein	NA
UHGV-2146511_9	eggNOG-mapper	10753.B7SSN1_BPNF	Phage Connector (GP10)	NA
UHGV-2146511_9	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-2146511_9	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-2146511_10	Structural annotation	PF20934	NA	NA
UHGV-2146511_11	Structural annotation	PF21703, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-2146511_14	KOfam	K07273	acm; lysozyme	NA
UHGV-2146511_14	PHROG	phrog_291	endolysin	lysis
UHGV-2146511_14	UniRef90	UniRef90_A0A3R6JQ14	1,4-beta-N-acetylmuramidase	NA
UHGV-2146511_14	eggNOG-mapper	411470.RUMGNA_00451	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	NA
UHGV-2146511_14	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2146511_14	Pfam	PF00404	Dockerin type I domain	Dockerin_1
UHGV-2146511_14	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-2146511_14	Structural annotation	PF01183, NF011432, COG3757	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2146511	Yes	12,188 bps	36.82%	89.21%	0.9782
UHGV-2152329	No	11,942 bps	36.98%	99.90%	0.9773
UHGV-0041561	No	11,897 bps	37.08%	99.90%	0.9777
UHGV-2182399	No	12,146 bps	36.65%	88.84%	0.9778
UHGV-2130812	No	11,829 bps	37.22%	86.66%	0.9785
UHGV-1542222	No	10,955 bps	37.03%	80.26%	0.9756
UHGV-1538268	No	10,911 bps	36.98%	79.86%	0.9782
UHGV-1538260	No	10,905 bps	36.96%	79.81%	0.9784
UHGV-1538262	No	10,901 bps	36.91%	79.79%	0.9753
UHGV-1548994	No	10,859 bps	37.04%	79.48%	0.9779
UHGV-1557052	No	10,817 bps	37.10%	79.25%	0.9775
UHGV-1538261	No	10,594 bps	36.92%	77.49%	0.9796