vOTU-014305

Overview

vOTU representative UHGV-1991036

No. of genomes 6

Genome length 42,137 bps

Completeness 99.90% (high-quality)

Host Bacteroides caccae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-014305
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00049 › vSUBFAM-01129 › vGENUS-03769 › vSUBGEN-21525 › vOTU-014305
Host taxonomy	Bacteria › Bacteroidota › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides › Bacteroides caccae
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1991036
BioSample	NA
Genome length	42,137 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	59
CDS density	91.21%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1991036_1	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1991036_1	PHROG	phrog_1	integrase	integration and excision
UHGV-1991036_1	UniRef90	UniRef90_UPI001C3FB6D0	site-specific integrase	NA
UHGV-1991036_1	eggNOG-mapper	1235788.C802_04554	Arm DNA-binding domain	NA
UHGV-1991036_1	Pfam	PF17293	Arm DNA-binding domain	Arm-DNA-bind_5
UHGV-1991036_1	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-1991036_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1991036_1	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-1991036_1	Structural annotation	PF00589, PF17293, PF13102, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-1991036_5	UniRef90	UniRef90_UPI000E481466	NA	NA
UHGV-1991036_6	Structural annotation	PF08299, NF004688	NA	NA
UHGV-1991036_7	PHROG	phrog_26448	NA	unknown function
UHGV-1991036_7	eggNOG-mapper	411901.BACCAC_01114	NA	NA
UHGV-1991036_7	Pfam	PF20647	NA	DUF6808
UHGV-1991036_7	Structural annotation	PF20647	NA	NA
UHGV-1991036_9	PHROG	phrog_4636	tail spike protein	tail
UHGV-1991036_9	eggNOG-mapper	411901.BACCAC_01116	Calcineurin-like phosphoesterase	NA
UHGV-1991036_11	PHROG	phrog_28004	NA	unknown function
UHGV-1991036_11	eggNOG-mapper	411901.BACCAC_01118	NA	NA
UHGV-1991036_12	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-1991036_12	PHROG	phrog_894	endolysin	lysis
UHGV-1991036_12	UniRef90	UniRef90_A5ZE08	Peptidase M15	NA
UHGV-1991036_12	eggNOG-mapper	411901.BACCAC_01119	Peptidase M15	NA
UHGV-1991036_12	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-1991036_12	COG	COG3108	NA	NA
UHGV-1991036_12	Structural annotation	PF08291, COG3108	NA	NA
UHGV-1991036_13	UniRef90	UniRef90_A0A7M1RQK8	Putative lipoprotein	NA
UHGV-1991036_13	eggNOG-mapper	1121098.HMPREF1534_01108	NA	NA
UHGV-1991036_14	PHROG	phrog_8278	NA	unknown function
UHGV-1991036_14	eggNOG-mapper	411901.BACCAC_01121	NA	NA
UHGV-1991036_15	UniRef90	UniRef90_A0A7J4YT84	Glycosyl transferase	NA
UHGV-1991036_15	eggNOG-mapper	411901.BACCAC_01122	NA	NA
UHGV-1991036_15	Structural annotation	PF06197, COG3371	NA	NA
UHGV-1991036_17	PHROG	phrog_1407	major tail protein	tail
UHGV-1991036_17	eggNOG-mapper	1236514.BAKL01000051_gene3692	Phage tail tube protein	NA
UHGV-1991036_17	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-1991036_18	eggNOG-mapper	1347393.HG726026_gene2623	NA	NA
UHGV-1991036_18	Structural annotation	PF14594, TIGR03361, COG4379	NA	NA
UHGV-1991036_21	PHROG	phrog_1407	major tail protein	tail
UHGV-1991036_21	UniRef90	UniRef90_A0A3R6F680	Phage tail protein	NA
UHGV-1991036_21	eggNOG-mapper	1236514.BAKL01000051_gene3692	Phage tail tube protein	NA
UHGV-1991036_21	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-1991036_21	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1991036_22	UniRef90	UniRef90_A0A3R6X2B4	NA	NA
UHGV-1991036_22	eggNOG-mapper	1347393.HG726020_gene891	NA	NA
UHGV-1991036_22	Pfam	PF11367	NA	DUF3168
UHGV-1991036_22	Structural annotation	PF11367, COG5003	NA	NA
UHGV-1991036_24	eggNOG-mapper	1236514.BAKL01000051_gene3690	tape measure	NA
UHGV-1991036_24	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1991036_25	PHROG	phrog_617	major head protein	head and packaging
UHGV-1991036_25	UniRef90	UniRef90_UPI0008DAC872	phage major capsid protein	NA
UHGV-1991036_25	eggNOG-mapper	266762.HQ36_02100	Phage capsid family	NA
UHGV-1991036_25	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1991036_25	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1991036_25	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1991036_25	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1991036_26	KOfam	K06904	NA	NA
UHGV-1991036_26	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-1991036_26	UniRef90	UniRef90_A0A1Q6GPC1	Peptidase U35	NA
UHGV-1991036_26	eggNOG-mapper	1236514.BAKL01000051_gene3697	Caudovirus prohead serine protease	NA
UHGV-1991036_26	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1991036_26	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-1991036_26	COG	COG3740	Phage head maturation protease	NA
UHGV-1991036_26	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-1991036_27	PHROG	phrog_25	head closure Hc1	connector
UHGV-1991036_27	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-1991036_27	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-1991036_27	COG	COG5614	Phage head-tail adaptor	NA
UHGV-1991036_27	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1991036_28	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-1991036_28	UniRef90	UniRef90_UPI00189F5993	head-tail connector protein	NA
UHGV-1991036_28	eggNOG-mapper	1224136.AMFN01000003_gene3625	Phage gp6-like head-tail connector protein	NA
UHGV-1991036_28	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-1991036_28	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-1991036_28	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1991036_29	PHROG	phrog_129	transcriptional regulator	transcription regulation
UHGV-1991036_29	UniRef90	UniRef90_A5ZE92	KilA-N domain protein	NA
UHGV-1991036_29	eggNOG-mapper	411901.BACCAC_01204	KilA-N domain	NA
UHGV-1991036_29	Pfam	PF04383	KilA-N domain	KilA-N
UHGV-1991036_29	Structural annotation	PF04383, NF033622	NA	NA
UHGV-1991036_30	PHROG	phrog_12	portal protein	head and packaging
UHGV-1991036_30	UniRef90	UniRef90_A0A1Q6GPH8	Phage portal protein	NA
UHGV-1991036_30	eggNOG-mapper	1236514.BAKL01000051_gene3699	Phage portal protein	NA
UHGV-1991036_30	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1991036_30	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1991036_30	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1991036_30	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-1991036_31	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1991036_31	UniRef90	UniRef90_A0A1Q6GPI7	Terminase	NA
UHGV-1991036_31	eggNOG-mapper	266762.HQ36_02085	Phage Terminase	NA
UHGV-1991036_31	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1991036_31	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1991036_31	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1991036_31	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-1991036_32	AcrCatalog	cluster_23857	NA	NA
UHGV-1991036_32	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-1991036_33	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1991036_33	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1991036_33	UniRef90	UniRef90_A0A412RJL1	HNH endonuclease	NA
UHGV-1991036_33	eggNOG-mapper	1268240.ATFI01000007_gene425	HNH endonuclease	NA
UHGV-1991036_33	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1991036_33	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1991036_37	PHROG	phrog_9236	pyrophosphatase	other
UHGV-1991036_37	UniRef90	UniRef90_F3QSQ5	Conserved domain protein	NA
UHGV-1991036_37	eggNOG-mapper	411901.BACCAC_01178	NA	NA
UHGV-1991036_37	Structural annotation	PF08761, COG4508	NA	NA
UHGV-1991036_38	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-1991036_38	PHROG	phrog_67	DNA methyltransferase	other
UHGV-1991036_38	UniRef90	UniRef90_I9PVD0	Methyltransferase	NA
UHGV-1991036_38	eggNOG-mapper	411901.BACCAC_01182	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-1991036_38	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-1991036_38	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-1991036_38	COG	COG0863	DNA modification methylase	NA
UHGV-1991036_38	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-1991036_39	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1991036_39	UniRef90	UniRef90_A5ZE71	HNH endonuclease domain protein	NA
UHGV-1991036_39	eggNOG-mapper	411901.BACCAC_01183	HNH endonuclease domain protein	NA
UHGV-1991036_39	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-1991036_39	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-1991036_39	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-1991036_39	Structural annotation	PF07463, PF07453, TIGR01453	NA	NA
UHGV-1991036_40	KOfam	K14059	int; integrase	NA
UHGV-1991036_40	PHROG	phrog_1	integrase	integration and excision
UHGV-1991036_40	UniRef90	UniRef90_A0A016I0N0	Phage integrase family protein	NA
UHGV-1991036_40	eggNOG-mapper	411476.BACOVA_03915	Belongs to the 'phage' integrase family	NA
UHGV-1991036_40	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-1991036_40	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1991036_40	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1991036_40	Structural annotation	PF00589, PF13102, MF_02055, NF040815, COG4974	NA	NA
UHGV-1991036_41	PHROG	phrog_1071	DNA methyltransferase	other
UHGV-1991036_41	UniRef90	UniRef90_UPI0018981E25	N-6 DNA methylase	NA
UHGV-1991036_41	eggNOG-mapper	411476.BACOVA_03912	site-specific DNA-methyltransferase (adenine-specific) activity	NA
UHGV-1991036_41	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-1991036_41	Structural annotation	TIGR02469, COG0827	NA	NA
UHGV-1991036_42	eggNOG-mapper	357276.EL88_12585	NA	NA
UHGV-1991036_42	Structural annotation	NF009179, COG1595	NA	NA
UHGV-1991036_43	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-1991036_43	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-1991036_43	UniRef90	UniRef90_S3YGT9	PAPS_reduct domain-containing protein	NA
UHGV-1991036_43	eggNOG-mapper	411901.BACCAC_01181	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-1991036_43	PADLOC	SspD_00001	SspD	SSP
UHGV-1991036_43	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-1991036_43	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-1991036_43	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA
UHGV-1991036_46	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-1991036_46	PHROG	phrog_363	DNA methyltransferase	other
UHGV-1991036_46	UniRef90	UniRef90_A0A373G2C2	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1991036_46	eggNOG-mapper	435591.BDI_0861	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-1991036_46	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-1991036_46	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-1991036_46	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-1991036_46	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1991036_46	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-1991036_47	UniRef90	UniRef90_A0A412GGR6	NA	NA
UHGV-1991036_47	eggNOG-mapper	1227276.HMPREF9148_02101	NA	NA
UHGV-1991036_47	Pfam	PF11325	NA	DUF3127
UHGV-1991036_47	Structural annotation	PF11325, MF_00720, NF004476, COG2965	NA	NA
UHGV-1991036_48	eggNOG-mapper	1268240.ATFI01000007_gene440	NA	NA
UHGV-1991036_48	Structural annotation	PF05144, MF_00408, TIGR01629, COG2946	NA	NA
UHGV-1991036_50	PHROG	phrog_5034	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1991036_50	UniRef90	UniRef90_A0A3E5G704	Recombinase	NA
UHGV-1991036_50	eggNOG-mapper	1268240.ATFI01000007_gene442	Bacteriophage Lambda NinG protein	NA
UHGV-1991036_50	Pfam	PF05766	Bacteriophage Lambda NinG protein	NinG
UHGV-1991036_50	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1991036_50	Structural annotation	PF05766	NA	NA
UHGV-1991036_52	eggNOG-mapper	272559.BF9343_2321	NA	NA
UHGV-1991036_53	PHROG	phrog_19572	NA	unknown function
UHGV-1991036_53	UniRef90	UniRef90_A0A3E5G5E8	NA	NA
UHGV-1991036_53	eggNOG-mapper	1236514.BAKL01000012_gene1381	COG NOG14445 non supervised orthologous group	NA
UHGV-1991036_53	Pfam	PF14902	NA	DUF4494
UHGV-1991036_53	Structural annotation	PF14902	NA	NA
UHGV-1991036_54	UniRef90	UniRef90_UPI00189F5607	helix-turn-helix domain-containing protein	NA
UHGV-1991036_54	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1991036_55	UniRef90	UniRef90_A0A1Q6I9I2	HTH cro/C1-type domain-containing protein	NA
UHGV-1991036_55	eggNOG-mapper	272559.BF9343_2315	NA	NA
UHGV-1991036_55	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1991036_55	Structural annotation	PF12844, NF041951, COG1476	NA	NA
UHGV-1991036_57	Structural annotation	PF12083	NA	NA
UHGV-1991036_58	KOfam	K20968	exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA	NA
UHGV-1991036_58	PHROG	phrog_11275	NA	unknown function
UHGV-1991036_58	UniRef90	UniRef90_I9EAJ7	HTH araC/xylS-type domain-containing protein	NA
UHGV-1991036_58	eggNOG-mapper	411901.BACCAC_02682	Transcriptional regulator, AraC family	NA
UHGV-1991036_58	Pfam	PF12833	Helix-turn-helix domain	HTH_18
UHGV-1991036_58	COG	COG2207	AraC-type DNA-binding domain and AraC-containing proteins	NA
UHGV-1991036_58	Structural annotation	PF02311, PF12833, MF_01534, NF010025, COG2207, COG1917	NA	NA
UHGV-1991036_59	KOfam	K03286	TC.OOP; OmpA-OmpF porin, OOP family	NA
UHGV-1991036_59	UniRef90	UniRef90_R6DR03	OmpA-like domain-containing protein	NA
UHGV-1991036_59	eggNOG-mapper	411901.BACCAC_02681	ompA family	NA
UHGV-1991036_59	Pfam	PF00691	OmpA family	OmpA
UHGV-1991036_59	COG	COG2885	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	NA
UHGV-1991036_59	Structural annotation	PF13505, PF00691, MF_00842, NF008071, COG2885, COG3047	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1991036	Yes	42,137 bps	39.05%	99.90%	0.9764
UHGV-2007811	No	43,216 bps	39.21%	99.90%	0.9780
UHGV-1407509	No	25,104 bps	39.51%	67.23%	0.9783
UHGV-1421455	No	23,175 bps	39.99%	59.18%	0.9792
UHGV-1678257	No	17,623 bps	40.46%	46.95%	0.9782
UHGV-1623351	No	11,496 bps	39.45%	18.64%	0.9689