vOTU-014338

Overview

vOTU representative UHGV-2013166

No. of genomes 5

Genome length 46,263 bps

Completeness 99.90% (high-quality)

Host Megasphaeraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-014338
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-01095 › vGENUS-17132 › vSUBGEN-31546 › vOTU-014338
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Veillonellales › Megasphaeraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2013166
BioSample	SAMEA2737792
Genome length	46,263 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	57
CDS density	92.19%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2013166_1	UniRef90	UniRef90_R7MXM9	Putative lipoprotein	NA
UHGV-2013166_1	eggNOG-mapper	1111454.HMPREF1250_0138	NA	NA
UHGV-2013166_2	PHROG	phrog_34863	NA	unknown function
UHGV-2013166_2	UniRef90	UniRef90_UPI001D017339	chitosanase	NA
UHGV-2013166_2	eggNOG-mapper	1273103.NM10_00929	LysM domain	NA
UHGV-2013166_2	Pfam	PF21277	Type VI secretion system spike protein VgrG3-like, C-terminal	T6SS_VgrG3-like_C
UHGV-2013166_2	COG	COG1388	LysM repeat	NA
UHGV-2013166_2	Structural annotation	PF21277	NA	NA
UHGV-2013166_3	PHROG	phrog_28789	NA	unknown function
UHGV-2013166_3	UniRef90	UniRef90_R7MZN4	Conserved domain protein	NA
UHGV-2013166_3	eggNOG-mapper	1273103.NM10_00934	NA	NA
UHGV-2013166_4	PHROG	phrog_4105	NA	unknown function
UHGV-2013166_4	eggNOG-mapper	706434.HMPREF9429_00642	NA	NA
UHGV-2013166_5	KOfam	K14059	int; integrase	NA
UHGV-2013166_5	PHROG	phrog_1	integrase	integration and excision
UHGV-2013166_5	UniRef90	UniRef90_UPI000404EDAD	site-specific integrase	NA
UHGV-2013166_5	eggNOG-mapper	568816.Acin_1821	Phage integrase family	NA
UHGV-2013166_5	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2013166_5	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2013166_5	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-2013166_6	eggNOG-mapper	742743.HMPREF9453_00547	tail collar domain protein	NA
UHGV-2013166_6	COG	COG4675	Phage tail collar domain	NA
UHGV-2013166_7	PHROG	phrog_33356	NA	unknown function
UHGV-2013166_7	UniRef90	UniRef90_G4Q8U0	Side tail fiber protein from lambdoid prophage Rac	NA
UHGV-2013166_7	eggNOG-mapper	568816.Acin_1822	Collagen triple helix repeat (20 copies)	NA
UHGV-2013166_7	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-2013166_8	PHROG	phrog_19099	NA	unknown function
UHGV-2013166_10	PHROG	phrog_2427	NA	unknown function
UHGV-2013166_11	PHROG	phrog_31	baseplate hub protein Tal	tail
UHGV-2013166_11	UniRef90	UniRef90_S7HS92	Phage-tail_3 domain-containing protein	NA
UHGV-2013166_11	eggNOG-mapper	1273103.NM10_03076	cellulase activity	NA
UHGV-2013166_11	Pfam	PF13550	Putative phage tail protein	Phage-tail_3
UHGV-2013166_11	COG	COG1511	NA	NA
UHGV-2013166_11	Structural annotation	PF13550, PF00041, PF09294, PF17936, PF14109, NF040662, NF041335, COG4733	NA	NA
UHGV-2013166_12	KOfam	K13695	nlpC; probable lipoprotein NlpC	NA
UHGV-2013166_12	PHROG	phrog_329	minor tail protein	tail
UHGV-2013166_12	UniRef90	UniRef90_S7HS93	NlpC/P60 domain-containing protein	NA
UHGV-2013166_12	eggNOG-mapper	1273103.NM10_03081	NlpC/P60 family	NA
UHGV-2013166_12	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-2013166_12	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-2013166_12	Structural annotation	PF00877, NF008096, COG0791	NA	NA
UHGV-2013166_13	PHROG	phrog_18	minor tail protein	tail
UHGV-2013166_13	UniRef90	UniRef90_S7HS09	Phage-like protein	NA
UHGV-2013166_13	eggNOG-mapper	1273103.NM10_03086	Phage minor tail protein L	NA
UHGV-2013166_13	Pfam	PF05100	Phage minor tail protein L	Phage_tail_L
UHGV-2013166_13	COG	COG4672	Phage tail protein	NA
UHGV-2013166_13	Structural annotation	PF08875, TIGR01600, COG4672	NA	NA
UHGV-2013166_14	PHROG	phrog_384	virion structural protein	head and packaging
UHGV-2013166_14	UniRef90	UniRef90_UPI001032B7DB	phage tail protein	NA
UHGV-2013166_14	eggNOG-mapper	1273103.NM10_03091	NA	NA
UHGV-2013166_14	Structural annotation	PF05939, TIGR02217, COG4718	NA	NA
UHGV-2013166_15	PHROG	phrog_30973	NA	unknown function
UHGV-2013166_15	UniRef90	UniRef90_UPI0018C794CE	transglycosylase SLT domain-containing protein	NA
UHGV-2013166_15	eggNOG-mapper	1273103.NM10_03096	nuclear chromosome segregation	NA
UHGV-2013166_15	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2013166_16	PHROG	phrog_680	tail length tape measure protein	tail
UHGV-2013166_16	Pfam	PF08809	NA	DUF1799
UHGV-2013166_17	PHROG	phrog_33144	NA	unknown function
UHGV-2013166_17	eggNOG-mapper	1273103.NM10_03106	NA	NA
UHGV-2013166_18	PHROG	phrog_290	minor tail protein	tail
UHGV-2013166_18	UniRef90	UniRef90_UPI00069D7D9F	phage tail tube protein	NA
UHGV-2013166_18	eggNOG-mapper	1273103.NM10_03111	NA	NA
UHGV-2013166_18	Pfam	PF18906	Phage tail tube protein	Phage_tube_2
UHGV-2013166_18	Structural annotation	PF18906, TIGR02241, TIGR02126, COG5437, COG3498	NA	NA
UHGV-2013166_19	PHROG	phrog_17431	NA	unknown function
UHGV-2013166_19	eggNOG-mapper	1273103.NM10_03116	NA	NA
UHGV-2013166_20	eggNOG-mapper	1273103.NM10_03121	NA	NA
UHGV-2013166_20	Structural annotation	PF05069, TIGR01725	NA	NA
UHGV-2013166_21	PHROG	phrog_36202	NA	unknown function
UHGV-2013166_22	PHROG	phrog_36232	NA	unknown function
UHGV-2013166_23	PHROG	phrog_29	major head protein	head and packaging
UHGV-2013166_23	UniRef90	UniRef90_A0A259U4U1	Phage major capsid protein E	NA
UHGV-2013166_23	eggNOG-mapper	1273103.NM10_03136	Phage major capsid protein E	NA
UHGV-2013166_23	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-2013166_23	Structural annotation	PF03864, MF_04133, TIGR04387, COG4653	NA	NA
UHGV-2013166_24	PHROG	phrog_49	head decoration	head and packaging
UHGV-2013166_24	UniRef90	UniRef90_UPI0018C49529	head decoration protein	NA
UHGV-2013166_24	eggNOG-mapper	1273103.NM10_03141	Bacteriophage lambda head decoration protein D	NA
UHGV-2013166_24	Pfam	PF02924	Bacteriophage lambda head decoration protein D	HDPD
UHGV-2013166_24	Structural annotation	PF02924	NA	NA
UHGV-2013166_25	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2013166_25	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2013166_25	UniRef90	UniRef90_S7J3I6	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2013166_25	eggNOG-mapper	1273103.NM10_03146	Belongs to the peptidase S14 family	NA
UHGV-2013166_25	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2013166_25	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2013166_25	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-2013166_26	PHROG	phrog_21	portal protein	head and packaging
UHGV-2013166_26	UniRef90	UniRef90_S7HSA9	Phage portal protein	NA
UHGV-2013166_26	eggNOG-mapper	1273103.NM10_03151	Phage portal protein	NA
UHGV-2013166_26	Pfam	PF05136	Phage portal protein, lambda family	Phage_portal_2
UHGV-2013166_26	NCBIFam	TIGR01539.1	phage portal protein	NA
UHGV-2013166_26	COG	COG5511	Phage capsid protein	NA
UHGV-2013166_26	Structural annotation	PF05136, MF_04135, TIGR01539, COG5511	NA	NA
UHGV-2013166_27	PHROG	phrog_20934	NA	unknown function
UHGV-2013166_27	Structural annotation	PF19645	NA	NA
UHGV-2013166_28	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-2013166_28	PHROG	phrog_15	terminase large subunit	head and packaging
UHGV-2013166_28	UniRef90	UniRef90_S7HS25	Phage terminase large subunit (GpA)	NA
UHGV-2013166_28	eggNOG-mapper	1273103.NM10_03161	Phage terminase large subunit (GpA)	NA
UHGV-2013166_28	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-2013166_28	Pfam	PF20454	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
UHGV-2013166_28	COG	COG5525	Phage terminase, large subunit GpA	NA
UHGV-2013166_28	HAMAP	MF_04144	Terminase, large subunit	NA
UHGV-2013166_28	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-2013166_29	KOfam	K22014	Nu1, Noh; terminase small subunit / prophage DNA-packing protein	NA
UHGV-2013166_29	PHROG	phrog_57	terminase small subunit	head and packaging
UHGV-2013166_29	UniRef90	UniRef90_UPI001371342C	DNA-packaging protein	NA
UHGV-2013166_29	eggNOG-mapper	1273103.NM10_03166	NA	NA
UHGV-2013166_29	COG	COG4220	Phage DNA packaging protein, Nu1 subunit of terminase	NA
UHGV-2013166_29	Structural annotation	PF07471, NF040990, COG4220	NA	NA
UHGV-2013166_32	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2013166_33	PHROG	phrog_1689	nucleotide kinase	other
UHGV-2013166_33	UniRef90	UniRef90_UPI001F0F7AF9	NA	NA
UHGV-2013166_33	eggNOG-mapper	706434.HMPREF9429_00388	NA	NA
UHGV-2013166_33	Pfam	PF11753	NA	DUF3310
UHGV-2013166_33	Structural annotation	PF11753	NA	NA
UHGV-2013166_36	KOfam	K03530	hupB; DNA-binding protein HU-beta	NA
UHGV-2013166_36	PHROG	phrog_379	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2013166_36	UniRef90	UniRef90_P0A3H3	DNA-binding protein HRL18	NA
UHGV-2013166_36	eggNOG-mapper	1082932.ATCR1_01070	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions	NA
UHGV-2013166_36	Pfam	PF00216	Bacterial DNA-binding protein	Bac_DNA_binding
UHGV-2013166_36	COG	COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	NA
UHGV-2013166_36	Structural annotation	PF00216, MF_00381, NF007945, COG0776	NA	NA
UHGV-2013166_37	PHROG	phrog_32878	NA	unknown function
UHGV-2013166_37	Structural annotation	NF041588	NA	NA
UHGV-2013166_38	PHROG	phrog_37395	NA	unknown function
UHGV-2013166_39	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-2013166_39	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2013166_39	UniRef90	UniRef90_A0A1M6SLL7	SNF2 family N-terminal domain-containing protein	NA
UHGV-2013166_39	eggNOG-mapper	592028.GCWU000321_01367	SNF2 family	NA
UHGV-2013166_39	PADLOC	DpdE_00010	DpdE	DPD
UHGV-2013166_39	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-2013166_39	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-2013166_39	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-2013166_39	Structural annotation	PF13872, PF16203, MF_01821, NF041790, COG0553	NA	NA
UHGV-2013166_40	PHROG	phrog_93	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2013166_40	UniRef90	UniRef90_UPI0008E6921F	VRR-NUC domain-containing protein	NA
UHGV-2013166_40	eggNOG-mapper	706434.HMPREF9429_00391	VRR_NUC	NA
UHGV-2013166_40	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-2013166_40	Structural annotation	PF01974, MF_01490, NF011269	NA	NA
UHGV-2013166_41	PHROG	phrog_256	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2013166_41	UniRef90	UniRef90_UPI000C7D00DC	virulence-associated E family protein	NA
UHGV-2013166_41	eggNOG-mapper	592028.GCWU000321_01365	Virulence-associated protein E	NA
UHGV-2013166_41	Pfam	PF05272	Virulence-associated protein E-like domain	VapE-like_dom
UHGV-2013166_41	COG	COG5545	Predicted P-loop ATPase and inactivated derivatives	NA
UHGV-2013166_41	Structural annotation	PF05272, MF_04000, NF005477, NF040562, COG5545	NA	NA
UHGV-2013166_42	KOfam	K02334	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	NA
UHGV-2013166_42	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-2013166_42	UniRef90	UniRef90_A0A1M6SMD2	DNA polymerase	NA
UHGV-2013166_42	eggNOG-mapper	592028.GCWU000321_01364	DNA polymerase	NA
UHGV-2013166_42	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-2013166_42	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-2013166_42	Structural annotation	PF00476, MF_04101, NF011540, COG0749	NA	NA
UHGV-2013166_43	PHROG	phrog_112	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-2013166_43	UniRef90	UniRef90_UPI001CD5EA47	NA	NA
UHGV-2013166_43	eggNOG-mapper	592028.GCWU000321_01363	NA	NA
UHGV-2013166_43	Pfam	PF10991	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
UHGV-2013166_43	Structural annotation	PF10991, MF_04153	NA	NA
UHGV-2013166_44	KOfam	K07465	K07465; putative RecB family exonuclease	NA
UHGV-2013166_44	PHROG	phrog_69	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-2013166_44	UniRef90	UniRef90_UPI001F33F7FB	NA	NA
UHGV-2013166_44	eggNOG-mapper	592028.GCWU000321_01362	NA	NA
UHGV-2013166_44	Pfam	PF10926	NA	DUF2800
UHGV-2013166_44	COG	COG2887	RecB family exonuclease	NA
UHGV-2013166_44	Structural annotation	PF10926, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-2013166_45	PHROG	phrog_18562	NA	unknown function
UHGV-2013166_45	eggNOG-mapper	592028.GCWU000321_01361	NA	NA
UHGV-2013166_46	KOfam	K24451	zim; modification methylase	NA
UHGV-2013166_46	PHROG	phrog_67	DNA methyltransferase	other
UHGV-2013166_46	UniRef90	UniRef90_U7UP84	Methyltransferase	NA
UHGV-2013166_46	eggNOG-mapper	1111454.HMPREF1250_1036	DNA methylase	NA
UHGV-2013166_46	PADLOC	MTase_II_00139	Type II methyltransferase	RM
UHGV-2013166_46	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-2013166_46	COG	COG0863	DNA modification methylase	NA
UHGV-2013166_46	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-2013166_47	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-2013166_47	UniRef90	UniRef90_UPI00056A4805	NA	NA
UHGV-2013166_47	eggNOG-mapper	556263.FSEG_01048	NA	NA
UHGV-2013166_47	Pfam	PF14359	NA	DUF4406
UHGV-2013166_48	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-2013166_48	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-2013166_48	UniRef90	UniRef90_U7ULX2	Helicase C-terminal domain protein	NA
UHGV-2013166_48	eggNOG-mapper	1111454.HMPREF1250_1035	DEAD-like helicases superfamily	NA
UHGV-2013166_48	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-2013166_48	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-2013166_48	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-2013166_48	Structural annotation	PF18766, PF16203, MF_01821, TIGR04095, COG0553	NA	NA
UHGV-2013166_49	eggNOG-mapper	1111454.HMPREF1250_1035	DEAD-like helicases superfamily	NA
UHGV-2013166_49	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-2013166_50	PHROG	phrog_633	transcriptional regulator	transcription regulation
UHGV-2013166_50	UniRef90	UniRef90_X8HX74	Winged helix-turn-helix DNA-binding protein	NA
UHGV-2013166_50	eggNOG-mapper	1111454.HMPREF1250_1034	NA	NA
UHGV-2013166_50	Structural annotation	PF04703, MF_00732, NF033788, COG2345	NA	NA
UHGV-2013166_52	UniRef90	UniRef90_UPI001D020CC7	helix-turn-helix domain-containing protein	NA
UHGV-2013166_52	eggNOG-mapper	318464.IO99_13850	Helix-turn-helix domain	NA
UHGV-2013166_52	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-2013166_55	KOfam	K18831	higA; HTH-type transcriptional regulator / antitoxin HigA	NA
UHGV-2013166_55	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-2013166_55	UniRef90	UniRef90_UPI0003018813	helix-turn-helix transcriptional regulator	NA
UHGV-2013166_55	eggNOG-mapper	1540257.JQMW01000013_gene774	NA	NA
UHGV-2013166_55	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2013166_55	Structural annotation	PF05339, NF041951, COG1396	NA	NA
UHGV-2013166_56	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2013166_56	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2013166_56	UniRef90	UniRef90_F9MML6	Peptidase S24-like protein	NA
UHGV-2013166_56	eggNOG-mapper	1000569.HMPREF1040_0220	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-2013166_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2013166_56	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-2013166_56	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-2013166_56	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-2013166_57	UniRef90	UniRef90_A0A133SGW9	zinc_ribbon_2 domain-containing protein	NA
UHGV-2013166_57	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-2013166_57	COG	COG1716	Forkhead associated (FHA) domain, binds pSer, pThr, pTyr	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2013166	Yes	46,263 bps	51.42%	99.90%	0.9796
UHGV-0070773	No	48,845 bps	51.19%	99.90%	0.9786
UHGV-0191321	No	31,805 bps	51.77%	69.73%	0.9792
UHGV-0185660	No	18,240 bps	49.63%	39.22%	0.9732
UHGV-1693562	No	10,867 bps	51.09%	23.68%	0.9765