vOTU-014357

Overview

vOTU representative UHGV-2022991

No. of genomes 4

Genome length 24,748 bps

Completeness 99.90% (high-quality)

Host Ruminococcus E bromii B

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-014357
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00673 › vGENUS-00827 › vSUBGEN-36479 › vOTU-014357
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › Ruminococcus E › Ruminococcus E bromii B
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2022991
BioSample	SAMEA2579947
Genome length	24,748 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	41
CDS density	94.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2022991_1	PHROG	phrog_1914	NA	unknown function
UHGV-2022991_1	UniRef90	UniRef90_A0A374NDM7	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-2022991_1	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-2022991_1	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-2022991_1	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-2022991_1	Structural annotation	PF06114, COG2856	NA	NA
UHGV-2022991_2	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2022991_2	UniRef90	UniRef90_UPI0015F3DE1D	helix-turn-helix domain-containing protein	NA
UHGV-2022991_2	eggNOG-mapper	663278.Ethha_2423	sequence-specific DNA binding	NA
UHGV-2022991_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2022991_2	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2022991_2	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-2022991_3	UniRef90	UniRef90_UPI000E51362F	helix-turn-helix domain-containing protein	NA
UHGV-2022991_3	eggNOG-mapper	411461.DORFOR_00030	Helix-turn-helix XRE-family like proteins	NA
UHGV-2022991_3	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-2022991_3	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-2022991_4	PHROG	phrog_8684	NA	unknown function
UHGV-2022991_4	UniRef90	UniRef90_UPI000E48855B	YopX family protein	NA
UHGV-2022991_4	eggNOG-mapper	1458852.A0A059T7V5_9CAUD	YopX protein	NA
UHGV-2022991_4	Pfam	PF09643	YopX protein	YopX
UHGV-2022991_4	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-2022991_4	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-2022991_5	UniRef90	UniRef90_UPI0015F48AC0	Lar family restriction alleviation protein	NA
UHGV-2022991_5	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-2022991_5	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-2022991_7	PHROG	phrog_4581	terminase small subunit	head and packaging
UHGV-2022991_7	UniRef90	UniRef90_UPI0018A90D59	HNH endonuclease	NA
UHGV-2022991_7	eggNOG-mapper	1414720.CBYM010000040_gene1642	HNH nucleases	NA
UHGV-2022991_7	Pfam	PF13671	AAA domain	AAA_33
UHGV-2022991_7	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2022991_8	UniRef90	UniRef90_A0A2N0ULT9	DNA binding domain, excisionase family	NA
UHGV-2022991_8	eggNOG-mapper	1283300.ATXB01000001_gene1737	DNA excision	NA
UHGV-2022991_8	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-2022991_8	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-2022991_8	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-2022991_8	Structural annotation	PF12728, NF040990, COG3311	NA	NA
UHGV-2022991_11	PHROG	phrog_8470	NA	unknown function
UHGV-2022991_11	UniRef90	UniRef90_UPI0018E45158	PcfJ domain-containing protein	NA
UHGV-2022991_11	eggNOG-mapper	641112.ACOK01000073_gene2870	PcfJ-like protein	NA
UHGV-2022991_11	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-2022991_11	Structural annotation	PF14284	NA	NA
UHGV-2022991_12	PHROG	phrog_6963	NA	unknown function
UHGV-2022991_12	eggNOG-mapper	641112.ACOK01000073_gene2872	NA	NA
UHGV-2022991_13	PHROG	phrog_15609	NA	unknown function
UHGV-2022991_15	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2022991_15	UniRef90	UniRef90_A0A374DVG7	HNH endonuclease	NA
UHGV-2022991_15	eggNOG-mapper	610130.Closa_0730	HNH endonuclease	NA
UHGV-2022991_15	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2022991_15	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2022991_15	Structural annotation	TIGR02646, COG1403	NA	NA
UHGV-2022991_17	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2022991_17	eggNOG-mapper	1235800.C819_00515	NA	NA
UHGV-2022991_17	Structural annotation	PF21578, NF041486	NA	NA
UHGV-2022991_18	eggNOG-mapper	394503.Ccel_3053	NA	NA
UHGV-2022991_18	Structural annotation	TIGR01636	NA	NA
UHGV-2022991_19	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2022991_19	UniRef90	UniRef90_A0A373XNZ9	HNH endonuclease	NA
UHGV-2022991_19	eggNOG-mapper	500633.CLOHIR_00362	HNH endonuclease	NA
UHGV-2022991_19	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2022991_19	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2022991_20	PHROG	phrog_1066	NA	unknown function
UHGV-2022991_20	eggNOG-mapper	931276.Cspa_c10130	NA	NA
UHGV-2022991_21	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2022991_21	UniRef90	UniRef90_A0A373XNY0	Terminase large subunit	NA
UHGV-2022991_21	eggNOG-mapper	411468.CLOSCI_00551	COG COG4626 Phage terminase-like protein, large subunit	NA
UHGV-2022991_21	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2022991_21	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2022991_21	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2022991_21	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-2022991_22	PHROG	phrog_12	portal protein	head and packaging
UHGV-2022991_22	UniRef90	UniRef90_A0A373XNZ6	Phage portal protein	NA
UHGV-2022991_22	eggNOG-mapper	411468.CLOSCI_00550	Phage portal protein	NA
UHGV-2022991_22	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2022991_22	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2022991_22	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2022991_23	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2022991_23	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2022991_23	UniRef90	UniRef90_A0A373XPG0	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2022991_23	eggNOG-mapper	1396.DJ87_978	Clp protease	NA
UHGV-2022991_23	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2022991_23	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2022991_23	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-2022991_24	PHROG	phrog_10	major head protein	head and packaging
UHGV-2022991_24	UniRef90	UniRef90_A0A373XLR3	Phage major capsid protein	NA
UHGV-2022991_24	eggNOG-mapper	411468.CLOSCI_00548	Phage capsid family	NA
UHGV-2022991_24	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2022991_24	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2022991_24	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2022991_25	PHROG	phrog_5223	neck protein	connector
UHGV-2022991_25	UniRef90	UniRef90_A0A174XIL0	NA	NA
UHGV-2022991_25	eggNOG-mapper	411902.CLOBOL_03878	NA	NA
UHGV-2022991_26	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-2022991_26	UniRef90	UniRef90_A0A373XMG4	Phage head-tail adapter protein	NA
UHGV-2022991_26	eggNOG-mapper	1536769.P40081_01090	head-tail adaptor	NA
UHGV-2022991_26	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2022991_26	COG	COG5614	Phage head-tail adaptor	NA
UHGV-2022991_26	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2022991_27	UniRef90	UniRef90_UPI001A9B6FBF	HK97 gp10 family phage protein	NA
UHGV-2022991_27	eggNOG-mapper	642492.Clole_0747	NA	NA
UHGV-2022991_27	Structural annotation	TIGR01725	NA	NA
UHGV-2022991_28	Structural annotation	PF12691	NA	NA
UHGV-2022991_29	PHROG	phrog_885	major tail protein	tail
UHGV-2022991_29	UniRef90	UniRef90_Q894J4	Conserved protein	NA
UHGV-2022991_29	eggNOG-mapper	1321814.HMPREF9089_00935	NA	NA
UHGV-2022991_29	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-2022991_30	PHROG	phrog_1021	NA	unknown function
UHGV-2022991_32	PHROG	phrog_23464	NA	unknown function
UHGV-2022991_32	UniRef90	UniRef90_A0A1C6JGQ9	Phage-related minor tail protein	NA
UHGV-2022991_32	eggNOG-mapper	1378168.N510_03078	Tail tape measure protein, TP901 family	NA
UHGV-2022991_32	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2022991_32	Structural annotation	COG3941	NA	NA
UHGV-2022991_33	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2022991_33	UniRef90	UniRef90_A0A1G5CPA2	Phage-related protein	NA
UHGV-2022991_33	eggNOG-mapper	1246.JMEA01000006_gene51	phage tail	NA
UHGV-2022991_33	COG	COG4722	Phage-related protein YomH	NA
UHGV-2022991_33	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2022991_34	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-2022991_34	UniRef90	UniRef90_A0A348ZBV6	Prophage_tail domain-containing protein	NA
UHGV-2022991_34	eggNOG-mapper	1160721.RBI_I01574	Prophage endopeptidase tail	NA
UHGV-2022991_34	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2022991_34	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2022991_34	COG	COG4926	Phage-related protein	NA
UHGV-2022991_34	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2022991_35	UniRef90	UniRef90_A0A374N9Y2	NA	NA
UHGV-2022991_35	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-2022991_35	Structural annotation	PF10651, PF08931, TIGR02268	NA	NA
UHGV-2022991_37	PHROG	phrog_199	holin	lysis
UHGV-2022991_37	UniRef90	UniRef90_A0A2N0ULW7	Holin	NA
UHGV-2022991_37	eggNOG-mapper	1160721.RBI_I01565	Bacteriophage holin family	NA
UHGV-2022991_37	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-2022991_37	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-2022991_37	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-2022991_37	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-2022991_38	eggNOG-mapper	411473.RUMCAL_02525	NA	NA
UHGV-2022991_39	KOfam	K07273	acm; lysozyme	NA
UHGV-2022991_39	PHROG	phrog_291	endolysin	lysis
UHGV-2022991_39	UniRef90	UniRef90_A0A373KPS8	PG_binding_1 domain-containing protein	NA
UHGV-2022991_39	eggNOG-mapper	1120933.ATUY01000002_gene158	lysozyme activity	NA
UHGV-2022991_39	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-2022991_39	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-2022991_39	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-2022991_39	Structural annotation	PF01183, PF01471, COG3757	NA	NA
UHGV-2022991_40	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-2022991_40	PHROG	phrog_67	DNA methyltransferase	other
UHGV-2022991_40	UniRef90	UniRef90_A0A843H832	Site-specific DNA-methyltransferase	NA
UHGV-2022991_40	eggNOG-mapper	877240.E1AC06_9CAUD	helicase activity	NA
UHGV-2022991_40	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-2022991_41	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-2022991_41	PHROG	phrog_67	DNA methyltransferase	other
UHGV-2022991_41	UniRef90	UniRef90_A0A412L7Z0	Site-specific DNA-methyltransferase	NA
UHGV-2022991_41	eggNOG-mapper	1154757.Q5C_06015	DNA methylase	NA
UHGV-2022991_41	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-2022991_41	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-2022991_41	COG	COG2189	Adenine specific DNA methylase Mod	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2022991	Yes	24,748 bps	40.10%	99.90%	0.9781
UHGV-0068605	No	27,189 bps	39.89%	99.90%	0.9754
UHGV-1405935	No	27,189 bps	39.89%	99.90%	0.9754
UHGV-1492158	No	14,790 bps	41.30%	60.55%	0.9778