vOTU-014381

Overview

vOTU representative UHGV-2030519

No. of genomes 3

Genome length 34,949 bps

Completeness 97.19% (high-quality)

Host CAG-488 sp000434055

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-014381
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 › vSUBFAM-01334 › vGENUS-02001 › vSUBGEN-17731 › vOTU-014381
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › CAG-488 › CAG-488 sp000434055
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2030519
BioSample	SAMEA2737795
Genome length	34,949 bps
CheckV completeness	97.19% (high-quality)
CheckV contamination	0.00%
CDS count	59
CDS density	92.03%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2030519_1	KOfam	K14059	int; integrase	NA
UHGV-2030519_1	PHROG	phrog_1	integrase	integration and excision
UHGV-2030519_1	UniRef90	UniRef90_R5Y1G4	Site-specific recombinase phage integrase family	NA
UHGV-2030519_1	eggNOG-mapper	428125.CLOLEP_02743	Belongs to the 'phage' integrase family	NA
UHGV-2030519_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2030519_1	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-2030519_1	Structural annotation	PF00589, PF02920, MF_01808, TIGR02224, COG4974, COG3422	NA	NA
UHGV-2030519_3	UniRef90	UniRef90_R5YHC1	Ribosomal protein L7/L12	NA
UHGV-2030519_3	eggNOG-mapper	1280696.ATVY01000086_gene2001	NA	NA
UHGV-2030519_4	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-2030519_4	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-2030519_4	UniRef90	UniRef90_R5Y1G1	Putative phage repressor	NA
UHGV-2030519_4	eggNOG-mapper	1262914.BN533_00809	Peptidase S24-like	NA
UHGV-2030519_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2030519_4	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-2030519_4	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-2030519_4	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-2030519_5	UniRef90	UniRef90_R5Y7C3	Toxin-antitoxin system antitoxin component Xre family	NA
UHGV-2030519_5	eggNOG-mapper	1262914.BN533_00808	NA	NA
UHGV-2030519_5	Pfam	PF05339	NA	DUF739
UHGV-2030519_5	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-2030519_5	Structural annotation	PF05339, MF_00535, NF002773, COG3655	NA	NA
UHGV-2030519_6	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-2030519_6	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2030519_6	UniRef90	UniRef90_R5XZX0	Helix-turn-helix domain-containing protein	NA
UHGV-2030519_6	eggNOG-mapper	1196324.A374_08974	Transcriptional	NA
UHGV-2030519_6	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-2030519_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2030519_6	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2030519_6	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2030519_7	KOfam	K14056	puuR; HTH-type transcriptional regulator, repressor for puuD	NA
UHGV-2030519_7	UniRef90	UniRef90_A0A316QDE2	XRE family transcriptional regulator	NA
UHGV-2030519_7	eggNOG-mapper	649747.HMPREF0083_01077	Helix-turn-helix XRE-family like proteins	NA
UHGV-2030519_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2030519_7	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2030519_7	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-2030519_9	UniRef90	UniRef90_R5Y7B9	DNA binding domain protein excisionase family	NA
UHGV-2030519_9	eggNOG-mapper	293826.Amet_1008	TIGRFAM DNA binding domain, excisionase family	NA
UHGV-2030519_9	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-2030519_9	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-2030519_9	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-2030519_9	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-2030519_12	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-2030519_12	UniRef90	UniRef90_R5YHB2	Gp157-like protein	NA
UHGV-2030519_12	eggNOG-mapper	1201292.DR75_1534	Siphovirus Gp157	NA
UHGV-2030519_12	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-2030519_12	Structural annotation	PF05565, NF002139	NA	NA
UHGV-2030519_13	PHROG	phrog_14970	NA	unknown function
UHGV-2030519_13	UniRef90	UniRef90_UPI00123F00F5	Rad52/Rad22 family DNA repair protein	NA
UHGV-2030519_13	eggNOG-mapper	1410632.JHWW01000001_gene1266	double-strand break repair protein	NA
UHGV-2030519_13	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-2030519_13	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-2030519_13	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-2030519_14	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-2030519_14	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-2030519_14	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-2030519_14	Pfam	PF05772	NinB protein	NinB
UHGV-2030519_14	Structural annotation	PF05772	NA	NA
UHGV-2030519_15	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2030519_15	UniRef90	UniRef90_R5XZW2	HNH domain-containing protein	NA
UHGV-2030519_15	eggNOG-mapper	1232449.BAHV02000016_gene1841	HNH nucleases	NA
UHGV-2030519_15	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2030519_16	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-2030519_16	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2030519_16	UniRef90	UniRef90_R5YVN5	Single-stranded DNA-binding protein	NA
UHGV-2030519_16	eggNOG-mapper	1507.HMPREF0262_03706	Single-stranded DNA-binding protein	NA
UHGV-2030519_16	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-2030519_16	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-2030519_16	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-2030519_16	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-2030519_16	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-2030519_18	PHROG	phrog_16304	NA	unknown function
UHGV-2030519_18	UniRef90	UniRef90_R5Y1F1	NA	NA
UHGV-2030519_18	eggNOG-mapper	665956.HMPREF1032_02617	Phage replisome organizer, N-terminal domain protein	NA
UHGV-2030519_18	Pfam	PF19808	NA	DUF6291
UHGV-2030519_18	COG	COG3935	DNA replication protein DnaD	NA
UHGV-2030519_18	Structural annotation	PF19808	NA	NA
UHGV-2030519_19	PHROG	phrog_4973	NA	unknown function
UHGV-2030519_19	UniRef90	UniRef90_R5Y7B1	Conserved domain protein	NA
UHGV-2030519_19	eggNOG-mapper	339671.Asuc_1218	Helix-turn-helix domain	NA
UHGV-2030519_19	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-2030519_19	Structural annotation	PF14090, NF040939, COG4738	NA	NA
UHGV-2030519_20	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-2030519_20	UniRef90	UniRef90_A0A522K775	NA	NA
UHGV-2030519_20	eggNOG-mapper	1236514.BAKL01000051_gene3708	NA	NA
UHGV-2030519_20	Pfam	PF06356	NA	DUF1064
UHGV-2030519_20	Structural annotation	PF06356	NA	NA
UHGV-2030519_24	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-2030519_24	UniRef90	UniRef90_A0A374MZ02	NA	NA
UHGV-2030519_24	eggNOG-mapper	1410624.JNKK01000051_gene2469	sigma factor activity	NA
UHGV-2030519_24	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-2030519_24	Structural annotation	PF07374, MF_00674, NF008895, COG1342	NA	NA
UHGV-2030519_25	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-2030519_25	PHROG	phrog_940	nuclease	DNA, RNA and nucleotide metabolism
UHGV-2030519_25	UniRef90	UniRef90_R6DKE7	ParB domain-containing protein	NA
UHGV-2030519_25	eggNOG-mapper	1232449.BAHV02000018_gene1534	NA	NA
UHGV-2030519_25	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-2030519_25	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2030519_25	Pfam	PF14386	NA	DUF4417
UHGV-2030519_25	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-2030519_25	Structural annotation	PF14386, PF02195, TIGR00180	NA	NA
UHGV-2030519_26	eggNOG-mapper	357808.RoseRS_2916	NA	NA
UHGV-2030519_26	Pfam	PF21814	NA	DUF6883
UHGV-2030519_26	Structural annotation	PF21814	NA	NA
UHGV-2030519_28	PHROG	phrog_9479	NA	unknown function
UHGV-2030519_28	eggNOG-mapper	1514668.JOOA01000002_gene2680	NA	NA
UHGV-2030519_28	Structural annotation	PF15529	NA	NA
UHGV-2030519_29	Pfam	PF21814	NA	DUF6883
UHGV-2030519_31	PHROG	phrog_2412	NA	unknown function
UHGV-2030519_31	UniRef90	UniRef90_UPI001C38E948	KGG domain-containing protein	NA
UHGV-2030519_31	eggNOG-mapper	1232449.BAHV02000018_gene1532	NA	NA
UHGV-2030519_32	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-2030519_32	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-2030519_32	UniRef90	UniRef90_R6DVT6	Phage terminase large subunit PBSX family	NA
UHGV-2030519_32	eggNOG-mapper	1120998.AUFC01000030_gene2231	Phage terminase, large subunit, PBSX family	NA
UHGV-2030519_32	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-2030519_32	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-2030519_32	COG	COG1783	Phage terminase large subunit	NA
UHGV-2030519_32	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-2030519_33	PHROG	phrog_533	portal protein	head and packaging
UHGV-2030519_33	UniRef90	UniRef90_R6DKE2	Phage minor capsid protein	NA
UHGV-2030519_33	eggNOG-mapper	1120998.AUFC01000030_gene2232	NA	NA
UHGV-2030519_33	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-2030519_33	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-2030519_34	PHROG	phrog_581	minor head protein	head and packaging
UHGV-2030519_34	UniRef90	UniRef90_R5XZV2	Protein gp4	NA
UHGV-2030519_34	eggNOG-mapper	1125725.HMPREF1325_1324	Phage minor capsid protein 2	NA
UHGV-2030519_34	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-2030519_34	COG	COG2369	NA	NA
UHGV-2030519_34	Structural annotation	PF06152	NA	NA
UHGV-2030519_35	Structural annotation	PF12305	NA	NA
UHGV-2030519_37	PHROG	phrog_34144	NA	unknown function
UHGV-2030519_37	eggNOG-mapper	938288.HG326225_gene1282	NA	NA
UHGV-2030519_37	Structural annotation	PF20111	NA	NA
UHGV-2030519_38	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-2030519_38	UniRef90	UniRef90_R6DN20	Phage minor structural protein GP20	NA
UHGV-2030519_38	eggNOG-mapper	536233.CLO_0539	Phage minor structural protein GP20	NA
UHGV-2030519_38	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-2030519_38	Structural annotation	PF06810	NA	NA
UHGV-2030519_39	PHROG	phrog_422	major head protein	head and packaging
UHGV-2030519_39	eggNOG-mapper	693746.OBV_18090	NA	NA
UHGV-2030519_39	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-2030519_40	PHROG	phrog_541	head-tail adaptor	connector
UHGV-2030519_40	UniRef90	UniRef90_R6DKE0	Putative gp8	NA
UHGV-2030519_40	eggNOG-mapper	632245.CLP_1650	NA	NA
UHGV-2030519_41	PHROG	phrog_3366	NA	unknown function
UHGV-2030519_41	Pfam	PF20536	NA	DUF6751
UHGV-2030519_41	Structural annotation	PF20536, COG5614	NA	NA
UHGV-2030519_42	PHROG	phrog_556	minor head protein	head and packaging
UHGV-2030519_42	UniRef90	UniRef90_UPI001F06267A	minor capsid protein	NA
UHGV-2030519_42	eggNOG-mapper	1449050.JNLE01000003_gene3886	NA	NA
UHGV-2030519_42	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-2030519_42	Structural annotation	PF11114	NA	NA
UHGV-2030519_43	PHROG	phrog_3266	tail completion	connector
UHGV-2030519_43	UniRef90	UniRef90_A0A416DT59	Chloramphenicol resistance protein	NA
UHGV-2030519_43	eggNOG-mapper	411490.ANACAC_00773	NA	NA
UHGV-2030519_43	Structural annotation	PF12691	NA	NA
UHGV-2030519_44	PHROG	phrog_3099	NA	unknown function
UHGV-2030519_44	eggNOG-mapper	469596.HMPREF9488_01325	NA	NA
UHGV-2030519_44	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-2030519_45	Structural annotation	PF10666	NA	NA
UHGV-2030519_46	PHROG	phrog_706	NA	unknown function
UHGV-2030519_46	UniRef90	UniRef90_UPI00067E77F7	Gp15 family bacteriophage protein	NA
UHGV-2030519_46	eggNOG-mapper	469596.HMPREF9488_01327	Bacteriophage Gp15 protein	NA
UHGV-2030519_46	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-2030519_46	Structural annotation	PF06854	NA	NA
UHGV-2030519_47	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-2030519_47	eggNOG-mapper	1504823.CCMM01000008_gene1032	phage tail tape measure protein	NA
UHGV-2030519_47	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-2030519_48	PHROG	phrog_1194	NA	unknown function
UHGV-2030519_49	PHROG	phrog_1330	tail protein	tail
UHGV-2030519_49	UniRef90	UniRef90_R5YH87	CBM-cenC domain-containing protein	NA
UHGV-2030519_49	Pfam	PF02018	Carbohydrate binding domain	CBM_4_9
UHGV-2030519_49	COG	COG4926	Phage-related protein	NA
UHGV-2030519_49	Structural annotation	PF05113, PF04862, NF033848, COG3500	NA	NA
UHGV-2030519_50	PHROG	phrog_1401	NA	unknown function
UHGV-2030519_50	UniRef90	UniRef90_UPI001628172B	NA	NA
UHGV-2030519_50	eggNOG-mapper	945713.IALB_0071	NA	NA
UHGV-2030519_50	Structural annotation	PF07761	NA	NA
UHGV-2030519_55	PHROG	phrog_1863	NA	unknown function
UHGV-2030519_55	eggNOG-mapper	693746.OBV_18260	NA	NA
UHGV-2030519_56	PHROG	phrog_263	holin	lysis
UHGV-2030519_56	UniRef90	UniRef90_R6E0V9	Holin SPP1 family	NA
UHGV-2030519_56	eggNOG-mapper	1121344.JHZO01000004_gene1372	SPP1 phage holin	NA
UHGV-2030519_56	Pfam	PF04688	SPP1 phage holin	Holin_SPP1
UHGV-2030519_56	NCBIFam	TIGR01592.1	phage holin	NA
UHGV-2030519_56	Structural annotation	PF04688, TIGR01592	NA	NA
UHGV-2030519_57	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2030519_57	PHROG	phrog_7698	endolysin	lysis
UHGV-2030519_57	UniRef90	UniRef90_R6DZ86	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-2030519_57	eggNOG-mapper	1226322.HMPREF1545_04024	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2030519_57	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2030519_57	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-2030519_57	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-2030519_57	Structural annotation	PF01510, MF_04111, NF008758, NF038080, COG5632	NA	NA
UHGV-2030519_59	PHROG	phrog_3364	NA	unknown function
UHGV-2030519_59	UniRef90	UniRef90_A0A1Y4MXI7	NA	NA
UHGV-2030519_59	eggNOG-mapper	1189612.A33Q_0887	sigma factor antagonist activity	NA
UHGV-2030519_59	PADLOC	DrmA_00001	DrmA	DISARM
UHGV-2030519_59	Pfam	PF14213	NA	DUF4325
UHGV-2030519_59	COG	COG2172	Anti-sigma regulatory factor (Ser/Thr protein kinase)	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2030519	Yes	34,949 bps	42.21%	97.19%	0.9754
UHGV-0077593	No	41,803 bps	42.88%	99.90%	0.9614
UHGV-1806758	No	13,555 bps	42.06%	33.97%	0.9788