vOTU-014593

Overview

vOTU representative UHGV-2132077

No. of genomes 2

Genome length 32,886 bps

Completeness 99.90% (high-quality)

Host Ruminiclostridium E

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-014593
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 › vSUBFAM-01684 › vGENUS-17138 › vSUBGEN-31570 › vOTU-014593
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Ruminiclostridium E
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2132077
BioSample	NA
Genome length	32,886 bps
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
CDS count	46
CDS density	91.77%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2132077_1	UniRef90	UniRef90_R6TP76	RHH_1 domain-containing protein	NA
UHGV-2132077_1	Pfam	PF01402	Ribbon-helix-helix protein, copG family	RHH_1
UHGV-2132077_1	Structural annotation	PF01402, NF040976, COG4710	NA	NA
UHGV-2132077_3	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-2132077_3	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2132077_3	UniRef90	UniRef90_A0A6N3UZK5	XRE family transcriptional regulator	NA
UHGV-2132077_3	eggNOG-mapper	1235797.C816_02851	Helix-turn-helix XRE-family like proteins	NA
UHGV-2132077_3	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-2132077_3	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2132077_3	Structural annotation	PF13560, NF041951, COG1813	NA	NA
UHGV-2132077_5	PHROG	phrog_15303	NA	unknown function
UHGV-2132077_5	UniRef90	UniRef90_A0A1M6MWW4	Bacteriophage holin of superfamily 6 (Holin_LLH)	NA
UHGV-2132077_5	eggNOG-mapper	1235797.C816_02843	NA	NA
UHGV-2132077_6	KOfam	K03749	dedD; DedD protein	NA
UHGV-2132077_6	PHROG	phrog_15001	endolysin	lysis
UHGV-2132077_6	UniRef90	UniRef90_R6GU62	Sporulation domain-containing protein	NA
UHGV-2132077_6	eggNOG-mapper	1121289.JHVL01000019_gene655	Sporulation related domain	NA
UHGV-2132077_6	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2132077_6	Pfam	PF05036	SPOR domain	SPOR
UHGV-2132077_6	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-2132077_6	Structural annotation	PF01510, PF18342, MF_04111, NF008758, NF040670, COG5632	NA	NA
UHGV-2132077_7	PHROG	phrog_17876	NA	unknown function
UHGV-2132077_7	eggNOG-mapper	537007.BLAHAN_04259	NA	NA
UHGV-2132077_8	PHROG	phrog_4105	NA	unknown function
UHGV-2132077_8	eggNOG-mapper	397288.C806_00056	NA	NA
UHGV-2132077_9	PHROG	phrog_1382	NA	unknown function
UHGV-2132077_9	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-2132077_9	Structural annotation	NF040910	NA	NA
UHGV-2132077_11	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-2132077_11	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-2132077_11	UniRef90	UniRef90_A0A845LQ98	Reverse transcriptase	NA
UHGV-2132077_11	eggNOG-mapper	755164.D6PSR5_9CAUD	RNA-directed DNA polymerase activity	NA
UHGV-2132077_11	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-2132077_11	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-2132077_11	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-2132077_12	PHROG	phrog_17147	NA	unknown function
UHGV-2132077_12	UniRef90	UniRef90_A0A1F8V1G3	BppU_N domain-containing protein	NA
UHGV-2132077_12	eggNOG-mapper	1321778.HMPREF1982_03560	NA	NA
UHGV-2132077_12	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-2132077_12	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-2132077_12	Structural annotation	PF12571	NA	NA
UHGV-2132077_13	PHROG	phrog_372	tail protein	tail
UHGV-2132077_13	UniRef90	UniRef90_R6GII0	Fibronectin type-III domain-containing protein	NA
UHGV-2132077_13	eggNOG-mapper	207656.S6B662_9CAUD	N-acetylmuramoyl-L-alanine amidase activity	NA
UHGV-2132077_13	Pfam	PF05895	NA	DUF859
UHGV-2132077_13	Structural annotation	PF05895, MF_04116, NF010681, COG3401	NA	NA
UHGV-2132077_14	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-2132077_14	UniRef90	UniRef90_A0A1F8V0S0	Prophage_tail domain-containing protein	NA
UHGV-2132077_14	eggNOG-mapper	1160721.RBI_I01574	Prophage endopeptidase tail	NA
UHGV-2132077_14	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-2132077_14	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-2132077_14	COG	COG4926	Phage-related protein	NA
UHGV-2132077_14	Structural annotation	PF14594, PF04862, TIGR01665, NF033675, COG4926, COG4935	NA	NA
UHGV-2132077_15	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2132077_15	UniRef90	UniRef90_R6GVG8	Phage putative tail component N-domain protein	NA
UHGV-2132077_15	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-2132077_15	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-2132077_15	COG	COG4722	Phage-related protein YomH	NA
UHGV-2132077_15	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-2132077_16	PHROG	phrog_58	tail length tape measure protein	tail
UHGV-2132077_16	UniRef90	UniRef90_A0A7G9WGR5	Phage tail protein	NA
UHGV-2132077_16	eggNOG-mapper	755731.Clo1100_0555	tail tape measure protein	NA
UHGV-2132077_16	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2132077_16	Structural annotation	PF10145, MF_04138, TIGR01760, COG5280	NA	NA
UHGV-2132077_17	eggNOG-mapper	411468.CLOSCI_00542	NA	NA
UHGV-2132077_17	Structural annotation	PF17388	NA	NA
UHGV-2132077_18	PHROG	phrog_2175	protein with Ig domain	other
UHGV-2132077_18	eggNOG-mapper	588581.Cpap_1267	NA	NA
UHGV-2132077_18	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-2132077_19	PHROG	phrog_78	tail terminator	connector
UHGV-2132077_19	UniRef90	UniRef90_U2SBX3	HTH merR-type domain-containing protein	NA
UHGV-2132077_19	eggNOG-mapper	1226322.HMPREF1545_00120	NA	NA
UHGV-2132077_19	Structural annotation	PF20765	NA	NA
UHGV-2132077_20	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2132077_20	UniRef90	UniRef90_UPI00135C8084	HK97 gp10 family phage protein	NA
UHGV-2132077_20	eggNOG-mapper	1123315.AUIP01000001_gene1428	NA	NA
UHGV-2132077_20	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2132077_20	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2132077_21	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-2132077_21	UniRef90	UniRef90_A0A355JF93	Phage head-tail adapter protein	NA
UHGV-2132077_21	eggNOG-mapper	411471.SUBVAR_05854	NA	NA
UHGV-2132077_21	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2132077_22	PHROG	phrog_5223	neck protein	connector
UHGV-2132077_22	UniRef90	UniRef90_A0A174XIL0	NA	NA
UHGV-2132077_22	eggNOG-mapper	411468.CLOSCI_00547	NA	NA
UHGV-2132077_23	PHROG	phrog_10	major head protein	head and packaging
UHGV-2132077_23	UniRef90	UniRef90_A0A355JDD3	Phage major capsid protein	NA
UHGV-2132077_23	eggNOG-mapper	411468.CLOSCI_00548	Phage capsid family	NA
UHGV-2132077_23	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2132077_23	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2132077_23	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2132077_24	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2132077_24	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2132077_24	UniRef90	UniRef90_A0A355JF79	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2132077_24	eggNOG-mapper	1382358.JHVN01000024_gene1706	Serine dehydrogenase proteinase	NA
UHGV-2132077_24	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2132077_24	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2132077_24	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-2132077_25	PHROG	phrog_12	portal protein	head and packaging
UHGV-2132077_25	UniRef90	UniRef90_A0A355JF89	Phage portal protein	NA
UHGV-2132077_25	eggNOG-mapper	411468.CLOSCI_00550	Phage portal protein	NA
UHGV-2132077_25	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2132077_25	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2132077_25	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2132077_25	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2132077_26	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2132077_26	UniRef90	UniRef90_A0A355JE04	Terminase large subunit	NA
UHGV-2132077_26	eggNOG-mapper	411468.CLOSCI_00551	COG COG4626 Phage terminase-like protein, large subunit	NA
UHGV-2132077_26	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2132077_26	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2132077_26	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2132077_26	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-2132077_27	PHROG	phrog_1066	NA	unknown function
UHGV-2132077_27	eggNOG-mapper	397290.C810_00417	NA	NA
UHGV-2132077_27	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-2132077_28	PHROG	phrog_31049	NA	unknown function
UHGV-2132077_28	eggNOG-mapper	431943.CKL_4074	NA	NA
UHGV-2132077_28	Structural annotation	TIGR01636	NA	NA
UHGV-2132077_31	KOfam	K03811	pnuC; nicotinamide mononucleotide transporter	NA
UHGV-2132077_31	UniRef90	UniRef90_A0A7V6XJY1	Nicotinamide mononucleotide transporter	NA
UHGV-2132077_31	Pfam	PF04973	Nicotinamide mononucleotide transporter	NMN_transporter
UHGV-2132077_32	PHROG	phrog_24368	NA	unknown function
UHGV-2132077_32	eggNOG-mapper	1235798.C817_02588	NA	NA
UHGV-2132077_33	PHROG	phrog_986	RNA-binding protein	DNA, RNA and nucleotide metabolism
UHGV-2132077_33	UniRef90	UniRef90_R5Y974	PF12961 structural domain protein	NA
UHGV-2132077_33	eggNOG-mapper	1582152.A0A0A8WI22_9CAUD	NA	NA
UHGV-2132077_33	Pfam	PF12961	NA	DUF3850
UHGV-2132077_34	PHROG	phrog_824	NA	unknown function
UHGV-2132077_34	UniRef90	UniRef90_R9J0I1	VRR-NUC domain-containing protein	NA
UHGV-2132077_34	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-2132077_34	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-2132077_34	Structural annotation	PF08774	NA	NA
UHGV-2132077_35	KOfam	K21507	dmt; methyltransferase [EC:2.1.1.-]	NA
UHGV-2132077_35	PHROG	phrog_38038	NA	unknown function
UHGV-2132077_35	UniRef90	UniRef90_A0A1C6BR97	DNA (cytosine-5-)-methyltransferase	NA
UHGV-2132077_35	eggNOG-mapper	1034347.CAHJ01000045_gene572	C-5 cytosine-specific DNA methylase	NA
UHGV-2132077_35	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-2132077_35	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-2132077_35	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2132077_36	eggNOG-mapper	1232443.BAIA02000103_gene2903	NA	NA
UHGV-2132077_37	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-2132077_37	PHROG	phrog_116	DNA methyltransferase	other
UHGV-2132077_37	UniRef90	UniRef90_A0A4S2H9S0	DNA (cytosine-5-)-methyltransferase	NA
UHGV-2132077_37	eggNOG-mapper	1235799.C818_01392	C-5 cytosine-specific DNA methylase	NA
UHGV-2132077_37	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-2132077_37	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-2132077_37	COG	COG0270	DNA-cytosine methylase	NA
UHGV-2132077_37	Structural annotation	PF01189, MF_00786, TIGR00406, COG2263	NA	NA
UHGV-2132077_38	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2132077_38	UniRef90	UniRef90_R6RCC6	Gp31	NA
UHGV-2132077_38	eggNOG-mapper	1415775.U729_1544	NA	NA
UHGV-2132077_38	Structural annotation	PF21578, NF033538	NA	NA
UHGV-2132077_39	UniRef90	UniRef90_T0I3T0	NA	NA
UHGV-2132077_39	eggNOG-mapper	1235798.C817_03170	Replication initiator protein A (RepA) N-terminus	NA
UHGV-2132077_39	Pfam	PF19481	NA	DUF6017
UHGV-2132077_40	KOfam	K08309	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	NA
UHGV-2132077_40	PHROG	phrog_19349	NA	unknown function
UHGV-2132077_40	UniRef90	UniRef90_UPI00164BCB1C	transglycosylase SLT domain-containing protein	NA
UHGV-2132077_40	eggNOG-mapper	742740.HMPREF9474_02375	lytic transglycosylase activity	NA
UHGV-2132077_40	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-2132077_40	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-2132077_40	Structural annotation	PF01464, MF_01616, NF011856, COG0741	NA	NA
UHGV-2132077_42	KOfam	K05925	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	NA
UHGV-2132077_42	PHROG	phrog_359	DNA methyltransferase	other
UHGV-2132077_42	UniRef90	UniRef90_A0A1C0AG56	DNA methyltransferase	NA
UHGV-2132077_42	eggNOG-mapper	887325.HMPREF0381_0367	MT-A70	NA
UHGV-2132077_42	PADLOC	MTase_II_00048	Type II methyltransferase	RM
UHGV-2132077_42	Pfam	PF05063	MT-A70	MT-A70
UHGV-2132077_42	COG	COG4725	N6-adenosine-specific RNA methylase IME4	NA
UHGV-2132077_42	Structural annotation	PF05063, MF_01872, NF010253, COG4725	NA	NA
UHGV-2132077_44	KOfam	K07482	K07482; transposase, IS30 family	NA
UHGV-2132077_44	PHROG	phrog_11420	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-2132077_44	UniRef90	UniRef90_A0A658JX23	Helix-turn-helix domain-containing protein	NA
UHGV-2132077_44	eggNOG-mapper	1519439.JPJG01000051_gene733	Helix-turn-helix domain	NA
UHGV-2132077_44	Pfam	PF13936	Helix-turn-helix domain	HTH_38
UHGV-2132077_44	Structural annotation	PF04218	NA	NA
UHGV-2132077_46	KOfam	K07124	NA	NA
UHGV-2132077_46	PHROG	phrog_3142	FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase	moron, auxiliary metabolic gene and host takeover
UHGV-2132077_46	UniRef90	UniRef90_A0A2V2F8Y8	Short-chain dehydrogenase	NA
UHGV-2132077_46	eggNOG-mapper	1504823.CCMM01000010_gene1243	Belongs to the short-chain dehydrogenases reductases (SDR) family	NA
UHGV-2132077_46	Pfam	PF00106	short chain dehydrogenase	adh_short
UHGV-2132077_46	COG	COG0300	Short-chain dehydrogenase	NA
UHGV-2132077_46	Structural annotation	PF13561, MF_01647, NF004198, COG1028	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2132077	Yes	32,886 bps	43.82%	99.90%	0.9730
UHGV-0088059	No	35,578 bps	43.73%	99.90%	0.9684