vOTU-015069

Overview

vOTU representative UHGV-2009330

No. of genomes 46

Genome length 15,172 bps

Completeness 51.07% (medium-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-015069
Number of genomes	46
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00015 › vOTU-015069
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2009330
BioSample	SAMEA2580032
Genome length	15,172 bps
CheckV completeness	51.07% (medium-quality)
CheckV contamination	0.00%
CDS count	15
CDS density	94.20%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2009330_1	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-2009330_1	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-2009330_1	UniRef90	UniRef90_A0A843HRU5	DNA-directed DNA polymerase	NA
UHGV-2009330_1	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-2009330_1	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA
UHGV-2009330_5	Structural annotation	PF08931	NA	NA
UHGV-2009330_8	PHROG	phrog_2038	upper collar connector	connector
UHGV-2009330_8	UniRef90	UniRef90_I3PV47	Connector protein	NA
UHGV-2009330_8	eggNOG-mapper	1309583.M4W5Z5_9CAUD	Phage Connector (GP10)	NA
UHGV-2009330_8	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-2009330_9	PHROG	phrog_2248	tail protein	tail
UHGV-2009330_9	UniRef90	UniRef90_A0A843GZQ7	Caud_tail_N domain-containing protein	NA
UHGV-2009330_9	eggNOG-mapper	12345.Q9FZW6_BPGA1	NA	NA
UHGV-2009330_9	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-2009330_9	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-2009330_9	Structural annotation	PF20934, PF16838	NA	NA
UHGV-2009330_10	PHROG	phrog_2006	major head protein	head and packaging
UHGV-2009330_10	UniRef90	UniRef90_J9H241	Major head protein	NA
UHGV-2009330_10	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-2009330_10	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-2009330_12	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-2009330_12	PHROG	phrog_7767	metallo-endopeptidase	other
UHGV-2009330_12	UniRef90	UniRef90_A0A348SZW4	Peptidase_M23 domain-containing protein	NA
UHGV-2009330_12	eggNOG-mapper	743718.Isova_1011	Peptidase family M23	NA
UHGV-2009330_12	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-2009330_12	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-2009330_12	Structural annotation	PF01551, NF040883	NA	NA
UHGV-2009330_13	PHROG	phrog_199	holin	lysis
UHGV-2009330_13	UniRef90	UniRef90_A0A843HL15	Phage holin family protein	NA
UHGV-2009330_13	eggNOG-mapper	877414.ATWA01000062_gene1614	Bacteriophage holin family	NA
UHGV-2009330_13	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-2009330_13	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-2009330_13	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-2009330_15	PHROG	phrog_2150	terminase	head and packaging
UHGV-2009330_15	UniRef90	UniRef90_A0A843GV47	Phage DNA encapsidation protein	NA
UHGV-2009330_15	eggNOG-mapper	10753.B7SSN7_BPNF	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-2009330_15	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-2009330_15	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2009330	Yes	15,172 bps	45.54%	51.07%	0.9595
UHGV-1488376	No	16,474 bps	45.57%	55.45%	0.9687
UHGV-1491695	No	16,440 bps	45.95%	55.33%	0.9743
UHGV-1414920	No	16,410 bps	45.75%	55.23%	0.9756
UHGV-0293691	No	16,408 bps	45.36%	55.22%	0.9678
UHGV-2185329	No	16,177 bps	45.63%	54.45%	0.9748
UHGV-0052438	No	16,131 bps	45.37%	54.29%	0.9548
UHGV-1415828	No	16,131 bps	45.37%	54.29%	0.9548
UHGV-0054463	No	16,106 bps	45.47%	54.21%	0.9572
UHGV-1413031	No	16,106 bps	45.47%	54.21%	0.9572
UHGV-1413041	No	16,106 bps	45.47%	54.21%	0.9572
UHGV-1501665	No	16,069 bps	45.85%	54.09%	0.9742
UHGV-1505146	No	16,039 bps	45.55%	53.98%	0.9661
UHGV-0224715	No	15,979 bps	45.61%	53.78%	0.9593
UHGV-0090213	No	15,964 bps	45.70%	53.73%	0.9634
UHGV-1502057	No	15,943 bps	45.34%	53.66%	0.9667
UHGV-0165478	No	15,930 bps	46.06%	53.61%	0.9647
UHGV-0255788	No	15,848 bps	45.34%	53.34%	0.9613
UHGV-0058232	No	15,790 bps	45.38%	53.15%	0.9760
UHGV-1503370	No	15,790 bps	45.38%	53.15%	0.9760
UHGV-1501837	No	15,778 bps	46.01%	53.11%	0.9685
UHGV-0072720	No	15,744 bps	45.45%	52.99%	0.9579
UHGV-1413810	No	15,735 bps	45.64%	52.96%	0.9509
UHGV-1416377	No	15,699 bps	45.72%	52.84%	0.9772
UHGV-0287115	No	15,581 bps	45.53%	52.44%	0.9725
UHGV-1863578	No	15,565 bps	45.99%	52.39%	0.9677
UHGV-0060359	No	15,499 bps	45.75%	52.17%	0.9706
UHGV-1457108	No	15,361 bps	45.73%	51.70%	0.9646
UHGV-1455348	No	15,305 bps	45.59%	51.51%	0.9650
UHGV-0061937	No	15,288 bps	45.45%	51.45%	0.9729
UHGV-1455746	No	15,288 bps	45.45%	51.45%	0.9729
UHGV-1457785	No	15,258 bps	45.93%	51.35%	0.9607
UHGV-1454965	No	15,235 bps	45.54%	51.28%	0.9735
UHGV-0058354	No	14,982 bps	45.75%	50.43%	0.9618
UHGV-0055616	No	14,976 bps	45.94%	50.41%	0.9549
UHGV-1496409	No	14,976 bps	45.74%	50.41%	0.9606
UHGV-1496410	No	14,976 bps	45.94%	50.41%	0.9549
UHGV-0055793	No	13,319 bps	46.11%	44.70%	0.9799
UHGV-1619211	No	13,319 bps	46.11%	44.70%	0.9799
UHGV-1588002	No	11,846 bps	46.35%	41.35%	0.9619
UHGV-1594456	No	11,815 bps	46.31%	41.24%	0.9584
UHGV-0105190	No	11,355 bps	46.83%	39.77%	0.9759
UHGV-1706550	No	10,807 bps	46.48%	37.72%	0.9706
UHGV-1654058	No	10,297 bps	46.26%	35.94%	0.9733
UHGV-1668340	No	10,019 bps	46.28%	34.97%	0.9429
UHGV-1667530	No	10,010 bps	46.39%	34.94%	0.9716