vOTU-015163

Overview

No. of genomes 32

Genome length 15,165 bps

Completeness 81.83% (medium-quality)

Host Mediterraneibacter torques

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-015163
Number of genomes	32
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-00777 › vOTU-015163
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Mediterraneibacter › Mediterraneibacter torques
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0115797
BioSample	SAMEA4431982
Genome length	15,165 bps
CheckV completeness	81.83% (medium-quality)
CheckV contamination	0.00%
CDS count	21
CDS density	95.41%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0115797_1	Pfam	PF11839	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
UHGV-0115797_4	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-0115797_5	PHROG	phrog_2038	upper collar connector	connector
UHGV-0115797_5	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-0115797_5	eggNOG-mapper	10747.Q37995_BPCP1	Phage Connector (GP10)	NA
UHGV-0115797_5	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0115797_5	Structural annotation	PF05352, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-0115797_6	PHROG	phrog_2248	tail protein	tail
UHGV-0115797_6	UniRef90	UniRef90_A0A843GII0	Caud_tail_N domain-containing protein	NA
UHGV-0115797_6	eggNOG-mapper	1309583.M4W9Q4_9CAUD	NA	NA
UHGV-0115797_6	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-0115797_6	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-0115797_6	Structural annotation	PF20934, PF16838	NA	NA
UHGV-0115797_7	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0115797_7	UniRef90	UniRef90_J9H241	Major head protein	NA
UHGV-0115797_7	eggNOG-mapper	1309583.M4W8D1_9CAUD	viral capsid	NA
UHGV-0115797_7	Structural annotation	PF19821, PF07354, MF_04119, TIGR04387, COG1659	NA	NA
UHGV-0115797_9	PHROG	phrog_11037	NA	unknown function
UHGV-0115797_9	UniRef90	UniRef90_A0A2Z4GUC1	Peptidoglycan hydrolase	NA
UHGV-0115797_9	eggNOG-mapper	33035.JPJF01000093_gene2240	NlpC/P60 family	NA
UHGV-0115797_9	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0115797_9	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0115797_9	Structural annotation	PF18013	NA	NA
UHGV-0115797_10	KOfam	K07273	acm; lysozyme	NA
UHGV-0115797_10	PHROG	phrog_291	endolysin	lysis
UHGV-0115797_10	UniRef90	UniRef90_A0A7X3MHG1	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0115797_10	eggNOG-mapper	1400520.LFAB_05325	Glycosyl hydrolases family 25	NA
UHGV-0115797_10	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0115797_10	Pfam	PF01476	LysM domain	LysM
UHGV-0115797_10	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0115797_10	Structural annotation	PF01183, PF01476, TIGR02899, COG3757, COG1388	NA	NA
UHGV-0115797_12	PHROG	phrog_2150	terminase	head and packaging
UHGV-0115797_12	UniRef90	UniRef90_A0A843HJH1	Phage DNA encapsidation protein	NA
UHGV-0115797_12	eggNOG-mapper	338473.A6XAE1_9CAUD	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-0115797_12	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0115797_12	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0115797_14	Structural annotation	PF17427	NA	NA
UHGV-0115797_16	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-0115797_16	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0115797_16	UniRef90	UniRef90_A0A843HHK5	DNA-directed DNA polymerase	NA
UHGV-0115797_16	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-0115797_16	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0115797_16	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-0115797_18	Pfam	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
UHGV-0115797_18	Structural annotation	PF04014, MF_01193, TIGR02609, COG2336	NA	NA
UHGV-0115797_20	PHROG	phrog_13182	NA	unknown function
UHGV-0115797_20	eggNOG-mapper	742741.HMPREF9475_02380	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0115797	Yes	15,165 bps	37.64%	81.83%	0.9809
UHGV-1359350	No	15,024 bps	37.91%	81.11%	0.9811
UHGV-1458311	No	15,128 bps	37.78%	71.26%	0.9799
UHGV-1403637	No	10,456 bps	37.92%	57.23%	0.9816
UHGV-1407658	No	10,425 bps	37.90%	57.06%	0.9810
UHGV-1496640	No	14,965 bps	37.81%	49.58%	0.9811
UHGV-1494385	No	14,927 bps	37.76%	49.45%	0.9805
UHGV-0264258	No	14,901 bps	37.84%	49.37%	0.9799
UHGV-0122345	No	14,888 bps	37.76%	49.33%	0.9806
UHGV-1494540	No	14,888 bps	37.76%	49.33%	0.9806
UHGV-1493444	No	14,870 bps	37.88%	49.27%	0.9818
UHGV-0339717	No	14,843 bps	37.87%	49.18%	0.9812
UHGV-1497798	No	14,821 bps	37.78%	49.10%	0.9811
UHGV-0046681	No	14,791 bps	37.73%	49.00%	0.9806
UHGV-1494879	No	14,791 bps	37.73%	49.00%	0.9806
UHGV-1494457	No	14,727 bps	38.04%	48.79%	0.9801
UHGV-1494458	No	14,727 bps	38.04%	48.79%	0.9801
UHGV-1418260	No	14,705 bps	37.90%	48.72%	0.9814
UHGV-1416727	No	14,690 bps	38.18%	48.67%	0.9812
UHGV-1417414	No	14,689 bps	37.88%	48.67%	0.9808
UHGV-0054039	No	14,643 bps	37.96%	48.51%	0.9804
UHGV-1416871	No	14,643 bps	37.96%	48.51%	0.9804
UHGV-1417126	No	14,643 bps	37.96%	48.51%	0.9804
UHGV-1412955	No	14,637 bps	37.97%	48.50%	0.9801
UHGV-0106972	No	14,582 bps	37.48%	48.31%	0.9807
UHGV-1411351	No	14,562 bps	38.00%	48.24%	0.9801
UHGV-1417677	No	14,504 bps	37.88%	48.05%	0.9791
UHGV-1414248	No	14,472 bps	37.93%	47.95%	0.9822
UHGV-1679155	No	10,662 bps	37.85%	33.84%	0.9806
UHGV-1618245	No	10,615 bps	37.90%	33.69%	0.9809
UHGV-1625743	No	10,450 bps	37.88%	33.17%	0.9802
UHGV-0315436	No	10,285 bps	37.84%	32.65%	0.9807