vOTU-015219

Overview

No. of genomes 34

Genome length 15,256 bps

Completeness 69.19% (medium-quality)

Host Firmicutes A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-015219
Number of genomes	34
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vOTU-015219
Host taxonomy	Bacteria › Firmicutes A
Host range breadth	Phylum
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0122363
BioSample	SAMEA37060168
Genome length	15,256 bps
CheckV completeness	69.19% (medium-quality)
CheckV contamination	0.00%
CDS count	17
CDS density	92.11%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0122363_4	PHROG	phrog_6243	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0122363_4	eggNOG-mapper	307240.Q5ILD0_9VIRU	Pfam:Phi29_Phage_SSB	NA
UHGV-0122363_4	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-0122363_4	Structural annotation	PF17427	NA	NA
UHGV-0122363_6	Structural annotation	PF05435	NA	NA
UHGV-0122363_7	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-0122363_7	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0122363_7	UniRef90	UniRef90_A0A355RJ67	DNA-directed DNA polymerase	NA
UHGV-0122363_7	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-0122363_7	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0122363_7	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-0122363_8	PHROG	phrog_2150	terminase	head and packaging
UHGV-0122363_8	UniRef90	UniRef90_A0A7M1RTB7	ATPase	NA
UHGV-0122363_8	eggNOG-mapper	10753.B7SSN7_BPNF	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-0122363_8	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0122363_8	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0122363_9	Pfam	PF10960	BhlA holin family	Holin_BhlA
UHGV-0122363_10	PHROG	phrog_380	endolysin	lysis
UHGV-0122363_10	UniRef90	UniRef90_A0A3A9ENR0	NlpC/P60 domain-containing protein	NA
UHGV-0122363_10	eggNOG-mapper	742740.HMPREF9474_01683	Glycosyl hydrolases family 25	NA
UHGV-0122363_10	Pfam	PF01476	LysM domain	LysM
UHGV-0122363_10	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0122363_10	Structural annotation	PF05382, PF08239, NF033743, COG0791	NA	NA
UHGV-0122363_12	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0122363_12	UniRef90	UniRef90_A0A843HQR2	Ig-like domain-containing protein	NA
UHGV-0122363_12	eggNOG-mapper	10756.CAPSD_BPPH2	viral capsid	NA
UHGV-0122363_12	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-0122363_13	PHROG	phrog_2248	tail protein	tail
UHGV-0122363_13	UniRef90	UniRef90_A0A345MZG4	Tail protein	NA
UHGV-0122363_13	eggNOG-mapper	10756.DIT9_BPPH2	NA	NA
UHGV-0122363_13	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-0122363_13	Structural annotation	PF16838	NA	NA
UHGV-0122363_14	PHROG	phrog_2248	tail protein	tail
UHGV-0122363_14	eggNOG-mapper	1309583.M4W9Q4_9CAUD	NA	NA
UHGV-0122363_14	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-0122363_15	PHROG	phrog_2038	upper collar connector	connector
UHGV-0122363_15	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-0122363_15	eggNOG-mapper	10756.PORTL_BPPH2	Phage Connector (GP10)	NA
UHGV-0122363_15	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0122363_15	Structural annotation	PF05352, MF_04120, TIGR01538, COG4695	NA	NA
UHGV-0122363_16	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-0122363_16	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-0122363_17	KOfam	K07164	NA	NA
UHGV-0122363_17	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-0122363_17	Structural annotation	PF09992, COG4632	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0122363	Yes	15,256 bps	33.32%	69.19%	0.9649
UHGV-0184342	No	15,700 bps	33.54%	67.94%	0.9706
UHGV-1358600	No	15,616 bps	33.37%	67.58%	0.9711
UHGV-1931600	No	15,471 bps	33.15%	66.95%	0.9727
UHGV-1914276	No	15,469 bps	33.33%	66.94%	0.9707
UHGV-1872181	No	15,467 bps	33.17%	66.77%	0.9691
UHGV-1978927	No	15,470 bps	33.25%	66.73%	0.9690
UHGV-1454559	No	15,383 bps	33.25%	66.57%	0.9706
UHGV-1453864	No	15,351 bps	33.42%	66.44%	0.9708
UHGV-2028086	No	15,534 bps	33.53%	66.43%	0.9717
UHGV-1480270	No	15,331 bps	33.42%	66.36%	0.9693
UHGV-1455161	No	15,307 bps	33.44%	66.20%	0.9694
UHGV-0845520	No	15,296 bps	33.46%	66.20%	0.9685
UHGV-1455528	No	15,296 bps	32.88%	66.17%	0.9648
UHGV-2101037	No	15,269 bps	33.43%	66.08%	0.9647
UHGV-1987296	No	15,266 bps	32.87%	66.04%	0.9684
UHGV-2151122	No	15,130 bps	33.34%	65.16%	0.9703
UHGV-2195918	No	14,423 bps	33.23%	62.42%	0.9753
UHGV-1500238	No	12,988 bps	32.02%	56.08%	0.9677
UHGV-1481986	No	12,705 bps	31.63%	54.98%	0.9644
UHGV-1917852	No	12,441 bps	33.12%	53.66%	0.9736
UHGV-1491481	No	12,399 bps	31.29%	53.65%	0.9682
UHGV-1489037	No	12,348 bps	31.70%	53.55%	0.9695
UHGV-1501802	No	12,137 bps	31.37%	52.52%	0.9641
UHGV-1505593	No	12,108 bps	31.40%	52.21%	0.9658
UHGV-0842938	No	12,008 bps	31.42%	51.97%	0.9609
UHGV-2221699	No	11,305 bps	31.36%	48.92%	0.9678
UHGV-1686475	No	10,756 bps	35.25%	46.45%	0.9802
UHGV-1940142	No	11,050 bps	35.21%	45.77%	0.9774
UHGV-1707015	No	10,944 bps	35.13%	45.34%	0.9788
UHGV-1702834	No	10,777 bps	35.31%	44.67%	0.9792
UHGV-1671600	No	10,184 bps	31.46%	43.93%	0.9748
UHGV-0075486	No	10,366 bps	34.45%	42.95%	0.9792
UHGV-1669384	No	10,277 bps	35.71%	42.60%	0.9786