vOTU-015249

Overview

No. of genomes 24

Genome length 38,656 bps

Completeness 85.50% (medium-quality)

Host CAG-196 sp002102975

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-015249
Number of genomes	24
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00095 › vSUBFAM-04066 › vGENUS-20658 › vOTU-015249
Host taxonomy	Bacteria › Cyanobacteria › Vampirovibrionia › Gastranaerophilales › Gastranaerophilaceae › CAG-196 › CAG-196 sp002102975
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1534224
BioSample	SAMEA4545541
Genome length	38,656 bps
CheckV completeness	85.50% (medium-quality)
CheckV contamination	0.00%
CDS count	47
CDS density	90.58%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1534224_4	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1534224_4	PHROG	phrog_1	integrase	integration and excision
UHGV-1534224_4	UniRef90	UniRef90_A0A843HLZ3	Site-specific integrase	NA
UHGV-1534224_4	eggNOG-mapper	1379858.N508_01690	Phage integrase family	NA
UHGV-1534224_4	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1534224_4	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1534224_4	Structural annotation	PF00589, PF20172, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-1534224_5	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1534224_6	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-1534224_7	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-1534224_7	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-1534224_7	UniRef90	UniRef90_A0A292SUW2	DNA helicase	NA
UHGV-1534224_7	eggNOG-mapper	1215915.BN193_04510	Participates in initiation and elongation during chromosome replication	NA
UHGV-1534224_7	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-1534224_7	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1534224_7	COG	COG0305	Replicative DNA helicase	NA
UHGV-1534224_7	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-1534224_8	Structural annotation	PF00436, MF_00984, NF005241, COG2965	NA	NA
UHGV-1534224_9	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-1534224_9	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1534224_9	UniRef90	UniRef90_A0A292SUJ4	Recombinase RecT	NA
UHGV-1534224_9	eggNOG-mapper	1150474.JQJI01000006_gene829	RecT family	NA
UHGV-1534224_9	Pfam	PF03837	RecT family	RecT
UHGV-1534224_9	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-1534224_9	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-1534224_9	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-1534224_11	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-1534224_11	UniRef90	UniRef90_A0A292SUI4	YqaJ domain-containing protein	NA
UHGV-1534224_11	eggNOG-mapper	1150474.JQJI01000006_gene830	YqaJ-like viral recombinase domain	NA
UHGV-1534224_11	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-1534224_11	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-1534224_11	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-1534224_11	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-1534224_13	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-1534224_13	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-1534224_13	UniRef90	UniRef90_A0A292SUM5	Peptidase_S24 domain-containing protein	NA
UHGV-1534224_13	eggNOG-mapper	644076.SCH4B_1728	transcriptional regulator	NA
UHGV-1534224_13	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-1534224_13	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-1534224_13	Structural annotation	PF00717, PF20432, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-1534224_17	PHROG	phrog_25883	NA	unknown function
UHGV-1534224_17	UniRef90	UniRef90_A0A1T4SYF7	Glutamine amidotransferases class-II	NA
UHGV-1534224_17	eggNOG-mapper	1046714.AMRX01000006_gene2903	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source	NA
UHGV-1534224_17	COG	COG0449	Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains	NA
UHGV-1534224_17	Structural annotation	PF13230, MF_01931, TIGR01134, COG0121	NA	NA
UHGV-1534224_18	PHROG	phrog_16683	NA	unknown function
UHGV-1534224_18	UniRef90	UniRef90_A0A1Q6KT11	Zinc-binding protein	NA
UHGV-1534224_18	eggNOG-mapper	1226322.HMPREF1545_00568	Putative amidoligase enzyme	NA
UHGV-1534224_18	Pfam	PF12224	Putative amidoligase enzyme	Amidoligase_2
UHGV-1534224_18	Structural annotation	PF12224, MF_01609, NF010042, COG2170	NA	NA
UHGV-1534224_19	eggNOG-mapper	857087.Metme_1985	NA	NA
UHGV-1534224_19	Pfam	PF21781	NA	DUF6876
UHGV-1534224_19	Structural annotation	PF21781	NA	NA
UHGV-1534224_23	Structural annotation	PF17574	NA	NA
UHGV-1534224_25	PHROG	phrog_332	head-tail adaptor	connector
UHGV-1534224_25	UniRef90	UniRef90_K2EAN5	Portal protein	NA
UHGV-1534224_25	Structural annotation	PF12236, MF_04120, TIGR01538, COG4695	NA	NA
UHGV-1534224_28	PHROG	phrog_267	major head protein	head and packaging
UHGV-1534224_28	eggNOG-mapper	882082.SaccyDRAFT_1473	P22 coat protein-protein 5 domain protein	NA
UHGV-1534224_28	Structural annotation	PF05065, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1534224_29	PHROG	phrog_24894	NA	unknown function
UHGV-1534224_29	Structural annotation	COG4288	NA	NA
UHGV-1534224_31	Structural annotation	PF20387	NA	NA
UHGV-1534224_32	Structural annotation	PF11134, MF_00923, NF000022, COG4257	NA	NA
UHGV-1534224_33	Structural annotation	PF11039, MF_02210, NF008072, COG1247	NA	NA
UHGV-1534224_39	PHROG	phrog_1158	tail assembly chaperone	tail
UHGV-1534224_39	Pfam	PF07087	NA	DUF1353
UHGV-1534224_39	Structural annotation	PF07087	NA	NA
UHGV-1534224_40	PHROG	phrog_1863	NA	unknown function
UHGV-1534224_40	UniRef90	UniRef90_A0A2K9NYV1	Holin	NA
UHGV-1534224_40	eggNOG-mapper	428125.CLOLEP_01781	NA	NA
UHGV-1534224_41	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1534224_41	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1534224_41	UniRef90	UniRef90_A0A292SUF1	PBSX family phage terminase large subunit	NA
UHGV-1534224_41	eggNOG-mapper	1267535.KB906767_gene2463	phage Terminase large subunit	NA
UHGV-1534224_41	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-1534224_41	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1534224_41	COG	COG1783	Phage terminase large subunit	NA
UHGV-1534224_41	Structural annotation	PF04466, PF17289, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1534224_42	PHROG	phrog_3230	NA	unknown function
UHGV-1534224_42	UniRef90	UniRef90_A0A8H9UU15	NA	NA
UHGV-1534224_42	eggNOG-mapper	1211817.CCAT010000065_gene581	NA	NA
UHGV-1534224_42	Pfam	PF07799	NA	DUF1643
UHGV-1534224_42	COG	COG4333	NA	NA
UHGV-1534224_43	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1534224_43	PHROG	phrog_5867	endolysin	lysis
UHGV-1534224_43	UniRef90	UniRef90_A0A292SUJ5	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1534224_43	eggNOG-mapper	1255043.TVNIR_1739	Chitinase class I	NA
UHGV-1534224_43	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1534224_43	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-1534224_43	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-1534224_46	KOfam	K12196	VPS4; vacuolar protein-sorting-associated protein 4	NA
UHGV-1534224_46	PHROG	phrog_168	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1534224_46	UniRef90	UniRef90_A0A292SUF3	AAA domain-containing protein	NA
UHGV-1534224_46	eggNOG-mapper	632335.Calkr_1607	PFAM AAA ATPase central domain protein	NA
UHGV-1534224_46	Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	AAA
UHGV-1534224_46	COG	COG0464	AAA+-type ATPase, SpoVK/Ycf46/Vps4 family	NA
UHGV-1534224_47	KOfam	K13525	VCP, CDC48; transitional endoplasmic reticulum ATPase	NA
UHGV-1534224_47	PHROG	phrog_168	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1534224_47	UniRef90	UniRef90_A0A292S845	ATPase_AAA_core domain-containing protein	NA
UHGV-1534224_47	eggNOG-mapper	1211035.CD30_06720	AAA domain (dynein-related subfamily)	NA
UHGV-1534224_47	Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	AAA
UHGV-1534224_47	COG	COG0465	ATP-dependent Zn proteases	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1534224	Yes	38,656 bps	32.02%	85.50%	0.9077
UHGV-0211081	No	36,477 bps	32.02%	80.68%	0.9263
UHGV-1535830	No	35,015 bps	32.34%	77.45%	0.9187
UHGV-0055956	No	34,940 bps	32.34%	77.28%	0.9233
UHGV-1426459	No	34,361 bps	32.34%	76.00%	0.9191
UHGV-1435397	No	32,155 bps	32.47%	71.14%	0.9328
UHGV-0103192	No	28,807 bps	32.18%	63.71%	0.9233
UHGV-1449529	No	28,387 bps	31.91%	62.76%	0.9089
UHGV-0093558	No	24,874 bps	31.26%	56.27%	0.8735
UHGV-1378492	No	23,404 bps	32.55%	51.75%	0.9264
UHGV-1378493	No	23,404 bps	32.55%	51.75%	0.9264
UHGV-1552794	No	22,023 bps	32.77%	48.69%	0.9326
UHGV-1664731	No	21,975 bps	32.81%	48.59%	0.9169
UHGV-1742560	No	21,473 bps	32.78%	47.48%	0.9195
UHGV-1742562	No	21,473 bps	32.78%	47.48%	0.9195
UHGV-1742565	No	21,472 bps	32.78%	47.47%	0.9192
UHGV-1726872	No	21,224 bps	33.03%	46.93%	0.9317
UHGV-2129470	No	18,762 bps	31.76%	42.44%	0.8953
UHGV-2130313	No	14,913 bps	31.88%	33.03%	0.8767
UHGV-1634543	No	14,567 bps	32.36%	32.20%	0.8629
UHGV-1818245	No	13,068 bps	32.38%	28.88%	0.8271
UHGV-1821905	No	12,216 bps	33.58%	27.02%	0.9519
UHGV-0109018	No	12,166 bps	33.63%	26.90%	0.9504
UHGV-1616870	No	11,590 bps	33.11%	25.65%	0.9408