vOTU-015272

Overview

No. of genomes 27

Genome length 16,565 bps

Completeness 79.04% (medium-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-015272
Number of genomes	27
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-02797 › vOTU-015272
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1486280
BioSample	NA
Genome length	16,565 bps
CheckV completeness	79.04% (medium-quality)
CheckV contamination	0.00%
CDS count	22
CDS density	91.29%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1486280_7	Structural annotation	PF06013, MF_00683, NF003844, COG4842	NA	NA
UHGV-1486280_10	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1486280_10	PHROG	phrog_15001	endolysin	lysis
UHGV-1486280_10	UniRef90	UniRef90_A0A1H0EAX2	Sporulation related domain-containing protein	NA
UHGV-1486280_10	eggNOG-mapper	1216932.CM240_0690	Sporulation related domain	NA
UHGV-1486280_10	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1486280_10	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1486280_10	Structural annotation	PF01510, NF008758, COG5632	NA	NA
UHGV-1486280_11	PHROG	phrog_2150	terminase	head and packaging
UHGV-1486280_11	UniRef90	UniRef90_A0A8D6UBB2	Encapsidation protein	NA
UHGV-1486280_11	eggNOG-mapper	10756.PKG16_BPPH2	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1486280_11	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1486280_11	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1486280_12	PHROG	phrog_6243	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1486280_12	UniRef90	UniRef90_J9GJ47	SsDNA binding protein (Fragment)	NA
UHGV-1486280_12	eggNOG-mapper	307240.Q5ILD0_9VIRU	Pfam:Phi29_Phage_SSB	NA
UHGV-1486280_12	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-1486280_13	PHROG	phrog_10365	late transcriptional activator	transcription regulation
UHGV-1486280_13	Pfam	PF05464	Phi-29-like late genes activator (early protein GP4)	Phi-29_GP4
UHGV-1486280_14	PHROG	phrog_6358	DNA terminal protein	DNA, RNA and nucleotide metabolism
UHGV-1486280_14	Structural annotation	PF05435	NA	NA
UHGV-1486280_15	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1486280_15	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1486280_15	UniRef90	UniRef90_A0A8D6UFH5	DNA-directed DNA polymerase	NA
UHGV-1486280_15	eggNOG-mapper	12345.Q96206_BPGA1	nucleotide binding	NA
UHGV-1486280_15	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1486280_15	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-1486280_16	PHROG	phrog_199	holin	lysis
UHGV-1486280_16	UniRef90	UniRef90_A0A1Q6PTT3	Holin	NA
UHGV-1486280_16	eggNOG-mapper	1121115.AXVN01000059_gene432	Bacteriophage holin family	NA
UHGV-1486280_16	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1486280_16	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1486280_16	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1486280_16	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1486280_18	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1486280_18	UniRef90	UniRef90_Q37888	Major capsid protein	NA
UHGV-1486280_18	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-1486280_18	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1486280_19	PHROG	phrog_2248	tail protein	tail
UHGV-1486280_19	UniRef90	UniRef90_A0A843GY36	Caud_tail_N domain-containing protein	NA
UHGV-1486280_19	eggNOG-mapper	10756.DIT9_BPPH2	NA	NA
UHGV-1486280_19	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1486280_19	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1486280_19	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1486280_20	PHROG	phrog_2038	upper collar connector	connector
UHGV-1486280_20	UniRef90	UniRef90_Q9FZW5	Head-tail connector (Portal protein)	NA
UHGV-1486280_20	eggNOG-mapper	1309583.M4W5Z5_9CAUD	Phage Connector (GP10)	NA
UHGV-1486280_20	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1486280_20	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-1486280_21	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1486280_21	UniRef90	UniRef90_P68930	Proximal tail tube connector protein	NA
UHGV-1486280_21	eggNOG-mapper	10753.B7SSN2_BPNF	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1486280	Yes	16,565 bps	38.20%	79.04%	0.9730
UHGV-0190026	No	16,547 bps	38.44%	77.96%	0.9746
UHGV-1491336	No	16,547 bps	38.44%	77.96%	0.9746
UHGV-1485553	No	16,533 bps	38.38%	77.91%	0.9755
UHGV-1413603	No	16,395 bps	38.37%	77.85%	0.9765
UHGV-0148497	No	16,450 bps	38.32%	77.51%	0.9722
UHGV-1491337	No	16,450 bps	38.32%	77.51%	0.9722
UHGV-1414442	No	16,323 bps	38.55%	77.51%	0.9750
UHGV-0377631	No	16,413 bps	38.29%	77.34%	0.9733
UHGV-0082211	No	16,395 bps	38.37%	77.26%	0.9769
UHGV-1415446	No	16,269 bps	38.57%	77.26%	0.9702
UHGV-1416120	No	16,243 bps	38.18%	77.10%	0.9739
UHGV-1416629	No	16,226 bps	38.17%	77.05%	0.9736
UHGV-1355156	No	16,327 bps	38.60%	76.93%	0.9714
UHGV-1411394	No	16,204 bps	38.34%	76.92%	0.9739
UHGV-1411643	No	16,192 bps	38.11%	76.88%	0.9745
UHGV-0054433	No	16,269 bps	38.57%	76.66%	0.9699
UHGV-1882215	No	16,199 bps	38.20%	76.33%	0.9737
UHGV-1503855	No	16,094 bps	38.18%	75.85%	0.9730
UHGV-1500888	No	16,018 bps	38.56%	75.50%	0.9732
UHGV-0218570	No	16,004 bps	38.62%	75.42%	0.9737
UHGV-1503406	No	15,977 bps	38.56%	75.31%	0.9734
UHGV-1426600	No	11,218 bps	39.17%	53.79%	0.9796
UHGV-1423325	No	11,114 bps	39.24%	53.28%	0.9786
UHGV-1422642	No	11,050 bps	38.88%	52.97%	0.9778
UHGV-1408183	No	10,579 bps	38.60%	50.71%	0.9770
UHGV-1408012	No	10,426 bps	38.26%	49.99%	0.9789