vOTU-015376

Overview

No. of genomes 35

Genome length 18,975 bps

Completeness 87.03% (medium-quality)

Host Gemmiger qucibialis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-015376
Number of genomes	35
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-01731 › vGENUS-02198 › vOTU-015376
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Gemmiger › Gemmiger qucibialis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1441323
BioSample	SAMEA2338711
Genome length	18,975 bps
CheckV completeness	87.03% (medium-quality)
CheckV contamination	0.00%
CDS count	24
CDS density	86.72%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1441323_1	Structural annotation	PF17548	NA	NA
UHGV-1441323_9	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1441323_9	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA
UHGV-1441323_10	KOfam	K06412	spoVG; stage V sporulation protein G	NA
UHGV-1441323_10	UniRef90	UniRef90_B8D019	SpoVG family protein	NA
UHGV-1441323_10	eggNOG-mapper	373903.Hore_21260	Belongs to the SpoVG family	NA
UHGV-1441323_10	Pfam	PF04026	SpoVG	SpoVG
UHGV-1441323_10	COG	COG2088	DNA-binding protein SpoVG, cell septation regulator	NA
UHGV-1441323_10	Structural annotation	PF04026, MF_00819, NF009749, COG2088	NA	NA
UHGV-1441323_11	Structural annotation	PF12708, TIGR04247, COG3420	NA	NA
UHGV-1441323_12	Pfam	PF11839	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
UHGV-1441323_15	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1441323_15	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-1441323_16	PHROG	phrog_2038	upper collar connector	connector
UHGV-1441323_16	eggNOG-mapper	338473.A6XAD7_9CAUD	Phage Connector (GP10)	NA
UHGV-1441323_16	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1441323_16	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-1441323_17	PHROG	phrog_2248	tail protein	tail
UHGV-1441323_17	UniRef90	UniRef90_A0A843HU95	Caud_tail_N domain-containing protein	NA
UHGV-1441323_17	eggNOG-mapper	1309583.M4W9Q4_9CAUD	NA	NA
UHGV-1441323_17	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1441323_17	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1441323_17	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1441323_18	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-1441323_18	PHROG	phrog_10030	tail length tape measure protein	tail
UHGV-1441323_18	UniRef90	UniRef90_A0A4Q0U6L7	Peptidase_M23 domain-containing protein (Fragment)	NA
UHGV-1441323_18	eggNOG-mapper	1321778.HMPREF1982_01258	G5	NA
UHGV-1441323_18	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-1441323_18	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-1441323_18	Structural annotation	PF01551, NF040883, COG0739	NA	NA
UHGV-1441323_19	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1441323_19	UniRef90	UniRef90_A0A843HQR2	Ig-like domain-containing protein	NA
UHGV-1441323_19	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-1441323_19	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1441323_22	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-1441323_22	PHROG	phrog_10030	tail length tape measure protein	tail
UHGV-1441323_22	UniRef90	UniRef90_A0A348SZW4	Peptidase_M23 domain-containing protein	NA
UHGV-1441323_22	eggNOG-mapper	1111479.AXAR01000014_gene1188	G5	NA
UHGV-1441323_22	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-1441323_22	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-1441323_22	Structural annotation	PF01551, NF040883	NA	NA
UHGV-1441323_23	PHROG	phrog_199	holin	lysis
UHGV-1441323_23	UniRef90	UniRef90_A0A843HL15	Phage holin family protein	NA
UHGV-1441323_23	eggNOG-mapper	877414.ATWA01000062_gene1614	Bacteriophage holin family	NA
UHGV-1441323_23	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1441323_23	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1441323_23	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1441323_24	PHROG	phrog_2150	terminase	head and packaging
UHGV-1441323_24	UniRef90	UniRef90_A0A355RJE0	DNA encapsidation protein	NA
UHGV-1441323_24	eggNOG-mapper	10756.PKG16_BPPH2	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1441323_24	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1441323_24	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1441323	Yes	18,975 bps	37.81%	87.03%	0.9791
UHGV-0067074	No	18,975 bps	37.81%	87.03%	0.9791
UHGV-1438582	No	18,934 bps	37.84%	86.85%	0.9779
UHGV-0045254	No	18,520 bps	37.22%	85.75%	0.9799
UHGV-1480934	No	18,520 bps	37.22%	85.75%	0.9799
UHGV-0062057	No	18,147 bps	37.56%	84.02%	0.9798
UHGV-1398615	No	18,147 bps	37.56%	84.02%	0.9798
UHGV-1396732	No	18,092 bps	37.54%	83.77%	0.9795
UHGV-1967501	No	19,093 bps	37.78%	59.42%	0.9800
UHGV-0137348	No	19,078 bps	37.87%	59.38%	0.9792
UHGV-1401666	No	19,078 bps	37.87%	59.38%	0.9792
UHGV-0062417	No	19,027 bps	37.56%	59.22%	0.9779
UHGV-1392710	No	19,027 bps	37.55%	59.22%	0.9779
UHGV-1437528	No	19,015 bps	37.89%	59.18%	0.9799
UHGV-0363975	No	19,006 bps	37.55%	59.15%	0.9765
UHGV-1544365	No	18,981 bps	37.89%	59.07%	0.9806
UHGV-0069922	No	18,957 bps	37.55%	59.00%	0.9801
UHGV-0183000	No	18,957 bps	37.55%	59.00%	0.9798
UHGV-1440643	No	18,957 bps	37.55%	59.00%	0.9801
UHGV-1994089	No	18,957 bps	37.55%	59.00%	0.9798
UHGV-0061437	No	18,835 bps	37.40%	58.62%	0.9784
UHGV-1439427	No	18,835 bps	37.40%	58.62%	0.9784
UHGV-1476178	No	18,471 bps	37.63%	57.49%	0.9789
UHGV-0067276	No	18,408 bps	37.89%	57.29%	0.9800
UHGV-1475297	No	18,408 bps	37.89%	57.29%	0.9800
UHGV-1475095	No	18,398 bps	37.67%	57.26%	0.9788
UHGV-0058416	No	18,238 bps	38.05%	56.76%	0.9803
UHGV-0058175	No	18,234 bps	37.61%	56.75%	0.9803
UHGV-1477856	No	18,234 bps	37.61%	56.75%	0.9792
UHGV-1477858	No	18,234 bps	37.61%	56.75%	0.9803
UHGV-1392420	No	16,840 bps	37.78%	56.68%	0.9792
UHGV-0160498	No	16,700 bps	37.48%	56.21%	0.9792
UHGV-1413952	No	14,341 bps	37.71%	48.27%	0.9812
UHGV-0158768	No	10,749 bps	38.54%	37.65%	0.9784
UHGV-0157287	No	10,131 bps	38.60%	35.48%	0.9786