vOTU-015518

Overview

No. of genomes 20

Genome length 12,754 bps

Completeness 56.74% (medium-quality)

Host CAG-345 sp000433315

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-015518
Number of genomes	20
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vOTU-015518
Host taxonomy	Bacteria › Firmicutes › Bacilli › RFN20 › CAG-288 › CAG-345 › CAG-345 sp000433315
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1499426
BioSample	SAMEA2042606
Genome length	12,754 bps
CheckV completeness	56.74% (medium-quality)
CheckV contamination	0.00%
CDS count	18
CDS density	94.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1499426_1	PHROG	phrog_27197	NA	unknown function
UHGV-1499426_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1499426_3	PHROG	phrog_6243	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1499426_3	UniRef90	UniRef90_J9GJ47	SsDNA binding protein (Fragment)	NA
UHGV-1499426_3	eggNOG-mapper	513550.B6RT34_9VIRU	Pfam:Phi29_Phage_SSB	NA
UHGV-1499426_3	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-1499426_3	Structural annotation	PF17427	NA	NA
UHGV-1499426_4	Structural annotation	PF05435	NA	NA
UHGV-1499426_5	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1499426_5	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1499426_5	UniRef90	UniRef90_A0A1W7M4V8	DNA-directed DNA polymerase	NA
UHGV-1499426_5	eggNOG-mapper	10756.DPOL_BPPH2	DNA polymerase type B, organellar and viral	NA
UHGV-1499426_5	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1499426_5	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-1499426_7	PHROG	phrog_2150	terminase	head and packaging
UHGV-1499426_7	UniRef90	UniRef90_A0A355RJE0	DNA encapsidation protein	NA
UHGV-1499426_7	eggNOG-mapper	10756.PKG16_BPPH2	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1499426_7	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1499426_7	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1499426_8	PHROG	phrog_199	holin	lysis
UHGV-1499426_8	UniRef90	UniRef90_A0A1Y4NGG1	Holin	NA
UHGV-1499426_8	eggNOG-mapper	1298920.KI911353_gene4833	Bacteriophage holin family	NA
UHGV-1499426_8	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1499426_8	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1499426_8	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1499426_8	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1499426_9	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-1499426_9	PHROG	phrog_7767	metallo-endopeptidase	other
UHGV-1499426_9	UniRef90	UniRef90_A0A2V2DY12	SLH domain-containing protein	NA
UHGV-1499426_9	eggNOG-mapper	1121024.AUCD01000008_gene2110	Peptidase family M23	NA
UHGV-1499426_9	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-1499426_9	Pfam	PF00395	S-layer homology domain	SLH
UHGV-1499426_9	COG	COG4942	Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB	NA
UHGV-1499426_9	Structural annotation	PF01551, MF_00664, NF040883, COG0739	NA	NA
UHGV-1499426_11	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1499426_11	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-1499426_12	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1499426_12	UniRef90	UniRef90_A0A843HQR2	Ig-like domain-containing protein	NA
UHGV-1499426_12	eggNOG-mapper	1309583.M4W8D1_9CAUD	viral capsid	NA
UHGV-1499426_12	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1499426_13	PHROG	phrog_2248	tail protein	tail
UHGV-1499426_13	eggNOG-mapper	1280698.AUJS01000055_gene1417	Predicted AAA-ATPase	NA
UHGV-1499426_13	Pfam	PF09820	Predicted AAA-ATPase	AAA-ATPase_like
UHGV-1499426_13	COG	COG4637	Predicted ATPase	NA
UHGV-1499426_15	PHROG	phrog_2038	upper collar connector	connector
UHGV-1499426_15	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-1499426_15	eggNOG-mapper	10756.PORTL_BPPH2	Phage Connector (GP10)	NA
UHGV-1499426_15	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1499426_15	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-1499426_16	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1499426_16	eggNOG-mapper	338473.A6XAD8_9CAUD	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1499426	Yes	12,754 bps	33.26%	56.74%	0.9589
UHGV-0274241	No	14,227 bps	33.08%	63.45%	0.9596
UHGV-0045421	No	14,197 bps	32.97%	63.29%	0.9441
UHGV-1447490	No	14,197 bps	32.97%	63.29%	0.9441
UHGV-1496272	No	13,810 bps	32.58%	61.80%	0.9485
UHGV-1494898	No	13,745 bps	32.59%	61.30%	0.9355
UHGV-1493784	No	13,492 bps	33.32%	60.15%	0.9467
UHGV-1401918	No	13,429 bps	33.36%	59.95%	0.9657
UHGV-0212373	No	13,283 bps	32.62%	59.25%	0.9525
UHGV-1402332	No	13,177 bps	33.38%	58.78%	0.9645
UHGV-0056435	No	12,794 bps	33.23%	57.07%	0.9555
UHGV-1504575	No	12,794 bps	33.23%	57.07%	0.9555
UHGV-1665025	No	10,993 bps	33.16%	49.23%	0.9613
UHGV-1415258	No	14,550 bps	32.69%	48.97%	0.9493
UHGV-1867274	No	10,869 bps	33.16%	48.84%	0.9694
UHGV-1449574	No	13,964 bps	32.96%	47.00%	0.9514
UHGV-0102807	No	14,851 bps	33.74%	46.42%	0.9619
UHGV-1497687	No	14,851 bps	33.74%	46.42%	0.9636
UHGV-2164770	No	14,570 bps	33.86%	45.54%	0.9615
UHGV-0806557	No	14,273 bps	33.19%	44.61%	0.9517