vOTU-015531

Overview

No. of genomes 22

Genome length 12,640 bps

Completeness 58.46% (medium-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-015531
Number of genomes	22
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vOTU-015531
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1483969
BioSample	SAMEA2042628
Genome length	12,640 bps
CheckV completeness	58.46% (medium-quality)
CheckV contamination	0.00%
CDS count	16
CDS density	92.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1483969_1	UniRef90	UniRef90_A0A098GES5	Putative phage associated protein	NA
UHGV-1483969_1	Structural annotation	PF01423, MF_00257, NF001963, COG1958	NA	NA
UHGV-1483969_4	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1483969_4	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1483969_4	UniRef90	UniRef90_A0A843HF73	DNA-directed DNA polymerase	NA
UHGV-1483969_4	eggNOG-mapper	12345.Q96206_BPGA1	nucleotide binding	NA
UHGV-1483969_4	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1483969_4	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-1483969_5	PHROG	phrog_2150	terminase	head and packaging
UHGV-1483969_5	UniRef90	UniRef90_A0A843GDL4	Phage DNA encapsidation protein	NA
UHGV-1483969_5	eggNOG-mapper	10756.PKG16_BPPH2	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1483969_5	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1483969_5	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1483969_8	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1483969_8	UniRef90	UniRef90_A0A843HQR2	Ig-like domain-containing protein	NA
UHGV-1483969_8	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-1483969_8	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-1483969_8	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1483969_9	PHROG	phrog_2248	tail protein	tail
UHGV-1483969_9	UniRef90	UniRef90_A0A843HJQ1	Caud_tail_N domain-containing protein	NA
UHGV-1483969_9	eggNOG-mapper	10756.DIT9_BPPH2	NA	NA
UHGV-1483969_9	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1483969_9	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1483969_9	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1483969_10	PHROG	phrog_2038	upper collar connector	connector
UHGV-1483969_10	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-1483969_10	eggNOG-mapper	10756.PORTL_BPPH2	Phage Connector (GP10)	NA
UHGV-1483969_10	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1483969_10	Structural annotation	PF05352, MF_04135, TIGR01538, COG4695	NA	NA
UHGV-1483969_11	PHROG	phrog_5472	lower collar	tail
UHGV-1483969_13	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1483969_13	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1483969_13	UniRef90	UniRef90_UPI00187259D8	single-stranded DNA-binding protein	NA
UHGV-1483969_13	eggNOG-mapper	1229783.C273_01840	single-stranded DNA binding	NA
UHGV-1483969_13	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1483969_13	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1483969_13	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1483969_14	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1483969_14	PHROG	phrog_3088	amidase	lysis
UHGV-1483969_14	UniRef90	UniRef90_A0A1C7GSU7	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-1483969_14	eggNOG-mapper	457396.CSBG_01063	Ami_2	NA
UHGV-1483969_14	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1483969_14	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1483969_14	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1483969	Yes	12,640 bps	39.02%	58.46%	0.9768
UHGV-0035132	No	11,738 bps	38.81%	61.61%	0.9795
UHGV-1487511	No	12,519 bps	38.38%	60.59%	0.9771
UHGV-1482032	No	12,437 bps	38.37%	60.26%	0.9781
UHGV-1491288	No	12,572 bps	38.94%	58.14%	0.9794
UHGV-0058213	No	12,661 bps	39.19%	58.02%	0.9779
UHGV-1483089	No	12,534 bps	39.56%	57.40%	0.9756
UHGV-0183081	No	12,494 bps	39.55%	57.22%	0.9747
UHGV-1486481	No	12,422 bps	38.63%	56.84%	0.9763
UHGV-0069195	No	12,336 bps	39.54%	56.50%	0.9775
UHGV-1503847	No	12,326 bps	38.64%	56.39%	0.9767
UHGV-1501798	No	12,141 bps	39.30%	56.15%	0.9799
UHGV-1504396	No	12,093 bps	39.19%	55.93%	0.9799
UHGV-1506815	No	12,180 bps	38.89%	55.82%	0.9768
UHGV-1505911	No	12,135 bps	38.77%	55.53%	0.9762
UHGV-0405036	No	11,960 bps	39.02%	55.32%	0.9780
UHGV-1391431	No	11,922 bps	38.97%	54.56%	0.9774
UHGV-1542773	No	11,755 bps	39.12%	53.87%	0.9773
UHGV-1386892	No	11,752 bps	38.94%	53.78%	0.9790
UHGV-1651491	No	10,989 bps	39.09%	50.82%	0.9793
UHGV-1621726	No	10,418 bps	39.12%	48.18%	0.9806
UHGV-1651731	No	10,305 bps	38.70%	47.16%	0.9731