vOTU-015648

Overview

No. of genomes 26

Genome length 13,713 bps

Completeness 61.18% (medium-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-015648
Number of genomes	26
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vOTU-015648
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0227021
BioSample	SAMD00114727
Genome length	13,713 bps
CheckV completeness	61.18% (medium-quality)
CheckV contamination	0.00%
CDS count	17
CDS density	92.26%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0227021_2	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-0227021_2	UniRef90	UniRef90_A0A7M1RPH5	Lower collar protein	NA
UHGV-0227021_2	eggNOG-mapper	10753.B7SSN2_BPNF	NA	NA
UHGV-0227021_3	PHROG	phrog_2038	upper collar connector	connector
UHGV-0227021_3	UniRef90	UniRef90_A0A1W7LXQ5	Putative Connector protein	NA
UHGV-0227021_3	eggNOG-mapper	10756.PORTL_BPPH2	Phage Connector (GP10)	NA
UHGV-0227021_3	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0227021_3	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-0227021_4	PHROG	phrog_2248	tail protein	tail
UHGV-0227021_4	UniRef90	UniRef90_A0A843GHP3	Caud_tail_N domain-containing protein	NA
UHGV-0227021_4	eggNOG-mapper	1161906.I6P8H4_9CAUD	NA	NA
UHGV-0227021_4	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-0227021_5	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-0227021_5	PHROG	phrog_2248	tail protein	tail
UHGV-0227021_5	UniRef90	UniRef90_A0A843HWB6	Caud_tail_N domain-containing protein	NA
UHGV-0227021_5	eggNOG-mapper	1121929.KB898686_gene177	G5	NA
UHGV-0227021_5	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-0227021_5	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0227021_5	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0227021_5	Structural annotation	PF16838, PF01551, NF008644, COG0739	NA	NA
UHGV-0227021_6	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0227021_6	UniRef90	UniRef90_A0A843HGP3	Ig-like domain-containing protein	NA
UHGV-0227021_6	eggNOG-mapper	10756.CAPSD_BPPH2	viral capsid	NA
UHGV-0227021_6	Structural annotation	PF21703, MF_04119, TIGR04387, COG1659	NA	NA
UHGV-0227021_7	Structural annotation	PF11418	NA	NA
UHGV-0227021_8	KOfam	K21472	lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]	NA
UHGV-0227021_8	PHROG	phrog_14988	peptidase	other
UHGV-0227021_8	UniRef90	UniRef90_A0A1C6BKV0	Glycyl-glycine endopeptidase ALE-1	NA
UHGV-0227021_8	eggNOG-mapper	700598.Niako_5729	PFAM Peptidase family M23	NA
UHGV-0227021_8	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0227021_8	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0227021_8	Structural annotation	PF01551, NF040883, COG0739	NA	NA
UHGV-0227021_9	PHROG	phrog_13256	NA	unknown function
UHGV-0227021_12	Structural annotation	PF17548	NA	NA
UHGV-0227021_13	PHROG	phrog_6243	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0227021_13	UniRef90	UniRef90_A0A345BNN7	Single-stranded DNA-binding protein	NA
UHGV-0227021_13	eggNOG-mapper	307240.Q5ILD0_9VIRU	Pfam:Phi29_Phage_SSB	NA
UHGV-0227021_13	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-0227021_13	Structural annotation	PF17427	NA	NA
UHGV-0227021_14	PHROG	phrog_10365	late transcriptional activator	transcription regulation
UHGV-0227021_14	Pfam	PF05464	Phi-29-like late genes activator (early protein GP4)	Phi-29_GP4
UHGV-0227021_14	Structural annotation	PF05464	NA	NA
UHGV-0227021_15	Structural annotation	PF05435	NA	NA
UHGV-0227021_16	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-0227021_16	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0227021_16	UniRef90	UniRef90_A0A316SF05	DNA-directed DNA polymerase	NA
UHGV-0227021_16	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-0227021_16	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0227021_16	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-0227021_17	PHROG	phrog_2150	terminase	head and packaging
UHGV-0227021_17	UniRef90	UniRef90_A0A355RJE0	DNA encapsidation protein	NA
UHGV-0227021_17	eggNOG-mapper	10753.B7SSN7_BPNF	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-0227021_17	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0227021_17	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0227021	Yes	13,713 bps	37.19%	61.18%	0.9735
UHGV-0319173	No	13,671 bps	37.20%	60.76%	0.9749
UHGV-1914484	No	13,613 bps	36.88%	60.69%	0.9737
UHGV-1496882	No	13,619 bps	37.29%	60.53%	0.9721
UHGV-1493883	No	13,614 bps	37.27%	60.49%	0.9741
UHGV-1494861	No	13,543 bps	37.09%	60.38%	0.9723
UHGV-0194787	No	13,523 bps	37.04%	60.29%	0.9726
UHGV-1497248	No	13,501 bps	37.05%	60.19%	0.9721
UHGV-0055732	No	13,523 bps	37.06%	60.08%	0.9722
UHGV-1492235	No	13,523 bps	37.06%	60.08%	0.9722
UHGV-1492241	No	13,523 bps	37.06%	60.08%	0.9722
UHGV-1410615	No	13,467 bps	37.00%	60.04%	0.9721
UHGV-1904927	No	13,498 bps	36.86%	59.98%	0.9727
UHGV-1401920	No	13,441 bps	37.00%	59.75%	0.9725
UHGV-1887369	No	13,396 bps	36.93%	59.71%	0.9720
UHGV-0127258	No	13,365 bps	36.79%	59.60%	0.9723
UHGV-1340580	No	13,365 bps	36.79%	59.60%	0.9723
UHGV-1410618	No	13,465 bps	37.03%	59.37%	0.9723
UHGV-1406444	No	13,302 bps	36.73%	59.31%	0.9723
UHGV-1410790	No	13,294 bps	36.98%	59.28%	0.9703
UHGV-0049434	No	13,425 bps	36.98%	59.19%	0.9712
UHGV-1401916	No	13,425 bps	36.98%	59.19%	0.9712
UHGV-0064757	No	13,271 bps	36.71%	58.99%	0.9732
UHGV-1869740	No	13,368 bps	36.82%	58.96%	0.9740
UHGV-0285146	No	13,363 bps	37.12%	58.91%	0.9729
UHGV-0170787	No	11,764 bps	37.41%	51.68%	0.9700