vOTU-016189

Overview

vOTU representative UHGV-2065587

No. of genomes 12

Genome length 36,069 bps

Completeness 67.42% (medium-quality)

Host Oscillospirales

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-016189
Number of genomes	12
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00011 › vOTU-016189
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales
Host range breadth	Order
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2065587
BioSample	SAMN05971614
Genome length	36,069 bps
CheckV completeness	67.42% (medium-quality)
CheckV contamination	0.00%
CDS count	39
CDS density	88.80%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2065587_1	PHROG	phrog_4709	NA	unknown function
UHGV-2065587_1	eggNOG-mapper	411473.RUMCAL_00553	NA	NA
UHGV-2065587_1	AcrCatalog	cluster_3300	NA	NA
UHGV-2065587_2	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2065587_2	UniRef90	UniRef90_A0A1K1YL55	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2065587_2	eggNOG-mapper	1384066.JAGT01000001_gene941	large subunit	NA
UHGV-2065587_2	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2065587_2	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2065587_2	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2065587_2	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2065587_3	KOfam	K07028	NA	NA
UHGV-2065587_3	PHROG	phrog_35548	NA	unknown function
UHGV-2065587_3	UniRef90	UniRef90_A0A239QG07	Predicted kinase	NA
UHGV-2065587_3	eggNOG-mapper	1280664.AUIX01000015_gene2261	AAA domain	NA
UHGV-2065587_3	Pfam	PF13671	AAA domain	AAA_33
UHGV-2065587_3	COG	COG0645	Predicted kinase, contains AAA domain	NA
UHGV-2065587_4	PHROG	phrog_12	portal protein	head and packaging
UHGV-2065587_4	UniRef90	UniRef90_R7H686	HK97 family phage portal protein	NA
UHGV-2065587_4	eggNOG-mapper	411473.RUMCAL_01625	Phage portal protein, HK97 family	NA
UHGV-2065587_4	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2065587_4	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-2065587_4	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2065587_4	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2065587_5	eggNOG-mapper	641112.ACOK01000108_gene1798	Belongs to the peptidase S14 family	NA
UHGV-2065587_5	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2065587_6	KOfam	K20170	nicA1; nicotine oxidoreductase [EC:1.5.3.-]	NA
UHGV-2065587_6	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-2065587_6	UniRef90	UniRef90_U2LB78	Group II intron-encoded protein LtrA	NA
UHGV-2065587_6	eggNOG-mapper	411473.RUMCAL_03452	NA	NA
UHGV-2065587_6	PADLOC	HEase_00017	homing endonuclease	RM
UHGV-2065587_6	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-2065587_6	Pfam	PF01348	Type II intron maturase	Intron_maturas2
UHGV-2065587_6	Pfam	PF21368	AI2M/AI1M-like, HNH endonuclease	AI2M-like_HNH
UHGV-2065587_6	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-2065587_6	Structural annotation	PF00078, PF01348, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-2065587_7	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-2065587_7	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-2065587_7	UniRef90	UniRef90_A0A1C6CKN2	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-2065587_7	eggNOG-mapper	411473.RUMCAL_01624	Belongs to the peptidase S14 family	NA
UHGV-2065587_7	Pfam	PF00574	Clp protease	CLP_protease
UHGV-2065587_7	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-2065587_7	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-2065587_8	PHROG	phrog_10	major head protein	head and packaging
UHGV-2065587_8	UniRef90	UniRef90_U2KTH2	Phage major capsid protein, HK97 family	NA
UHGV-2065587_8	eggNOG-mapper	411473.RUMCAL_01623	Phage major capsid protein, HK97 family	NA
UHGV-2065587_8	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2065587_8	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2065587_8	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2065587_8	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2065587_9	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-2065587_9	UniRef90	UniRef90_U2JP98	Phage DNA packaging protein	NA
UHGV-2065587_9	eggNOG-mapper	411473.RUMCAL_01622	Phage DNA packaging protein	NA
UHGV-2065587_9	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-2065587_9	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-2065587_9	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-2065587_10	PHROG	phrog_25	head closure Hc1	connector
UHGV-2065587_10	UniRef90	UniRef90_U2KU37	Putative phage head-tail adaptor	NA
UHGV-2065587_10	eggNOG-mapper	411473.RUMCAL_01621	Phage head-tail joining protein	NA
UHGV-2065587_10	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2065587_10	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2065587_10	COG	COG5614	Phage head-tail adaptor	NA
UHGV-2065587_10	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-2065587_11	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-2065587_11	UniRef90	UniRef90_U2KW23	Phage protein, HK97 gp10 family	NA
UHGV-2065587_11	eggNOG-mapper	411473.RUMCAL_01154	NA	NA
UHGV-2065587_11	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2065587_11	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-2065587_12	PHROG	phrog_78	tail terminator	connector
UHGV-2065587_12	UniRef90	UniRef90_UPI0005C7AE81	NA	NA
UHGV-2065587_12	eggNOG-mapper	411473.RUMCAL_01619	NA	NA
UHGV-2065587_12	Structural annotation	PF20765	NA	NA
UHGV-2065587_13	PHROG	phrog_88	major tail protein	tail
UHGV-2065587_13	UniRef90	UniRef90_U2KAW8	Phage major tail protein, phi13 family	NA
UHGV-2065587_13	eggNOG-mapper	411473.RUMCAL_01618	phage major tail protein, phi13 family	NA
UHGV-2065587_13	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-2065587_13	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-2065587_14	PHROG	phrog_709	NA	unknown function
UHGV-2065587_14	eggNOG-mapper	411473.RUMCAL_01617	NA	NA
UHGV-2065587_14	Structural annotation	PF11836	NA	NA
UHGV-2065587_15	PHROG	phrog_3033	NA	unknown function
UHGV-2065587_15	UniRef90	UniRef90_A0A2X2UJ60	Phage-like protein	NA
UHGV-2065587_15	eggNOG-mapper	411473.RUMCAL_01150	NA	NA
UHGV-2065587_16	KOfam	K06218	relE, stbE; mRNA interferase RelE/StbE	NA
UHGV-2065587_16	UniRef90	UniRef90_U2KW18	Toxin-antitoxin system, toxin component, RelE family	NA
UHGV-2065587_16	eggNOG-mapper	411473.RUMCAL_01149	Toxin-antitoxin system, toxin component, RelE family	NA
UHGV-2065587_16	COG	COG2026	mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system	NA
UHGV-2065587_16	Structural annotation	PF15781, TIGR00053, COG2026	NA	NA
UHGV-2065587_17	KOfam	K18923	stbD; antitoxin StbD	NA
UHGV-2065587_17	UniRef90	UniRef90_A0A374VMJ0	Type II toxin-antitoxin system Phd/YefM family antitoxin	NA
UHGV-2065587_17	eggNOG-mapper	411473.RUMCAL_01148	Antitoxin Phd_YefM, type II toxin-antitoxin system	NA
UHGV-2065587_17	Pfam	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system	PhdYeFM_antitox
UHGV-2065587_17	COG	COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	NA
UHGV-2065587_17	Structural annotation	PF02604, TIGR01552, COG2161	NA	NA
UHGV-2065587_18	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-2065587_18	UniRef90	UniRef90_R7H7A1	Phage tail tape measure protein TP901 family	NA
UHGV-2065587_18	eggNOG-mapper	411473.RUMCAL_02820	Phage tail tape measure protein, TP901 family	NA
UHGV-2065587_18	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2065587_18	Pfam	PF04513	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
UHGV-2065587_18	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-2065587_18	COG	COG5283	Phage-related tail protein	NA
UHGV-2065587_18	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-2065587_19	KOfam	K18815	aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]	NA
UHGV-2065587_19	PHROG	phrog_3810	acetyltransferase	other
UHGV-2065587_19	UniRef90	UniRef90_A0A352TMB6	N-acetyltransferase domain-containing protein	NA
UHGV-2065587_19	eggNOG-mapper	1392493.JIAB01000001_gene1531	Acetyltransferase (GNAT) domain	NA
UHGV-2065587_19	Pfam	PF00583	Acetyltransferase (GNAT) family	Acetyltransf_1
UHGV-2065587_19	COG	COG0454	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	NA
UHGV-2065587_20	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2065587_20	UniRef90	UniRef90_U2LM27	Phage tail component protein	NA
UHGV-2065587_20	eggNOG-mapper	411473.RUMCAL_02824	NA	NA
UHGV-2065587_20	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-2065587_20	COG	COG4722	Phage-related protein YomH	NA
UHGV-2065587_20	Structural annotation	PF20753, PF16774, TIGR01633, COG4722	NA	NA
UHGV-2065587_21	PHROG	phrog_538	minor tail protein	tail
UHGV-2065587_21	UniRef90	UniRef90_UPI001D005132	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-2065587_21	eggNOG-mapper	1341157.RF007C_02580	NA	NA
UHGV-2065587_21	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-2065587_21	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-2065587_22	PHROG	phrog_18805	NA	unknown function
UHGV-2065587_22	UniRef90	UniRef90_A0A374VRM9	Leucine-rich repeat domain-containing protein	NA
UHGV-2065587_22	eggNOG-mapper	1341157.RF007C_02575	Leucine rich repeats (6 copies)	NA
UHGV-2065587_22	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-2065587_22	COG	COG4886	Leucine-rich repeat (LRR) protein	NA
UHGV-2065587_22	Structural annotation	PF13306, PF20747	NA	NA
UHGV-2065587_23	PHROG	phrog_25979	NA	unknown function
UHGV-2065587_23	UniRef90	UniRef90_UPI001D1209BE	collagen-like protein	NA
UHGV-2065587_23	eggNOG-mapper	411473.RUMCAL_00613	Collagen triple helix repeat (20 copies)	NA
UHGV-2065587_23	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-2065587_23	COG	COG2931	Ca2+-binding protein, RTX toxin-related	NA
UHGV-2065587_23	Structural annotation	PF01404, PF16640, NF038128	NA	NA
UHGV-2065587_24	PHROG	phrog_199	holin	lysis
UHGV-2065587_24	UniRef90	UniRef90_A0A3C0IH03	Holin	NA
UHGV-2065587_24	eggNOG-mapper	411473.RUMCAL_03177	Bacteriophage holin family	NA
UHGV-2065587_24	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-2065587_24	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-2065587_24	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-2065587_24	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-2065587_25	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-2065587_25	PHROG	phrog_15001	endolysin	lysis
UHGV-2065587_25	UniRef90	UniRef90_A0A3C0IHA8	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-2065587_25	eggNOG-mapper	411473.RUMCAL_00618	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-2065587_25	AcrCatalog	cluster_53013	NA	NA
UHGV-2065587_25	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-2065587_25	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-2065587_25	Structural annotation	PF01510, NF008758, COG5632	NA	NA
UHGV-2065587_26	PHROG	phrog_2308	NA	unknown function
UHGV-2065587_26	UniRef90	UniRef90_A0A6N7VMH2	RNA polymerase subunit sigma-70	NA
UHGV-2065587_26	eggNOG-mapper	411473.RUMCAL_00619	recombinase activity	NA
UHGV-2065587_26	Pfam	PF06056	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
UHGV-2065587_26	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2065587_26	Structural annotation	PF06056, COG2771	NA	NA
UHGV-2065587_27	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2065587_27	PHROG	phrog_95	integrase	integration and excision
UHGV-2065587_27	UniRef90	UniRef90_U2KXH8	Resolvase protein	NA
UHGV-2065587_27	eggNOG-mapper	411473.RUMCAL_00620	Resolvase, N terminal domain	NA
UHGV-2065587_27	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2065587_27	Pfam	PF07508	Recombinase	Recombinase
UHGV-2065587_27	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-2065587_27	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2065587_27	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-2065587_28	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2065587_28	PHROG	phrog_95	integrase	integration and excision
UHGV-2065587_28	UniRef90	UniRef90_U2MCH2	Resolvase protein	NA
UHGV-2065587_28	eggNOG-mapper	411473.RUMCAL_00621	NA	NA
UHGV-2065587_28	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2065587_28	Pfam	PF07508	Recombinase	Recombinase
UHGV-2065587_28	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-2065587_28	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2065587_28	Structural annotation	PF00239, PF07508, PF18822, NF041201, COG1961	NA	NA
UHGV-2065587_29	AcrCatalog	cluster_17186	NA	NA
UHGV-2065587_31	PHROG	phrog_31146	NA	unknown function
UHGV-2065587_31	UniRef90	UniRef90_U2KEP7	Plasmid recombination enzyme	NA
UHGV-2065587_31	eggNOG-mapper	411473.RUMCAL_00624	extracellular polysaccharide biosynthetic process	NA
UHGV-2065587_31	Pfam	PF01076	Plasmid recombination enzyme	Mob_Pre
UHGV-2065587_31	COG	COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	NA
UHGV-2065587_31	Structural annotation	PF01076, NF041497	NA	NA
UHGV-2065587_32	KOfam	K14060	pinR; putative DNA-invertase from lambdoid prophage Rac	NA
UHGV-2065587_32	PHROG	phrog_125	DNA invertase	DNA, RNA and nucleotide metabolism
UHGV-2065587_32	UniRef90	UniRef90_U2KXI3	Resolvase protein	NA
UHGV-2065587_32	eggNOG-mapper	411473.RUMCAL_00625	Resolvase, N terminal domain	NA
UHGV-2065587_32	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2065587_32	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2065587_32	Structural annotation	PF00239, PF02796, NF009949, COG1961	NA	NA
UHGV-2065587_35	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2065587_35	PHROG	phrog_95	integrase	integration and excision
UHGV-2065587_35	UniRef90	UniRef90_U2KEQ3	Resolvase protein	NA
UHGV-2065587_35	eggNOG-mapper	411473.RUMCAL_00629	NA	NA
UHGV-2065587_35	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2065587_35	Pfam	PF07508	Recombinase	Recombinase
UHGV-2065587_35	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-2065587_35	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2065587_35	Structural annotation	PF00239, PF07508, PF15188, NF041201, COG1961	NA	NA
UHGV-2065587_36	eggNOG-mapper	411473.RUMCAL_00630	NA	NA
UHGV-2065587_37	eggNOG-mapper	411473.RUMCAL_00631	NA	NA
UHGV-2065587_39	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2065587_39	PHROG	phrog_95	integrase	integration and excision
UHGV-2065587_39	UniRef90	UniRef90_U2KY27	Zn_ribbon_recom domain-containing protein	NA
UHGV-2065587_39	eggNOG-mapper	411473.RUMCAL_00633	NA	NA
UHGV-2065587_39	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-2065587_39	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2065587	Yes	36,069 bps	44.33%	67.42%	0.8955
UHGV-2060683	No	18,225 bps	44.02%	32.48%	0.8734
UHGV-2088639	No	18,124 bps	43.99%	32.28%	0.8590
UHGV-2067891	No	16,867 bps	44.66%	31.90%	0.8911
UHGV-2186527	No	13,129 bps	45.87%	25.03%	0.8120
UHGV-2175723	No	12,546 bps	44.22%	23.82%	0.8657
UHGV-2073125	No	14,060 bps	45.12%	23.55%	0.7807
UHGV-2150168	No	12,027 bps	46.91%	22.44%	0.9146
UHGV-2118530	No	12,023 bps	46.89%	22.44%	0.9137
UHGV-2154620	No	11,603 bps	43.61%	22.37%	0.8607
UHGV-2072526	No	11,010 bps	43.86%	21.23%	0.8495
UHGV-2044055	No	10,502 bps	44.14%	20.36%	0.8525