vOTU-016406

Overview

vOTU representative UHGV-0208327

No. of genomes 13

Genome length 39,427 bps

Completeness 92.60% (high-quality)

Host Alistipes sp900541585

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-016406
Number of genomes	13
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00152 › vSUBFAM-01785 › vGENUS-20427 › vSUBGEN-40214 › vOTU-016406
Host taxonomy	Bacteria › Bacteroidota › Bacteroidia › Bacteroidales › Rikenellaceae › Alistipes › Alistipes sp900541585
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0208327
BioSample	NA
Genome length	39,427 bps
CheckV completeness	92.60% (high-quality)
CheckV contamination	0.00%
CDS count	48
CDS density	89.97%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0208327_1	Pfam	PF09357	RteC protein	RteC
UHGV-0208327_2	PHROG	phrog_66	excisionase and transcriptional regulator	integration and excision
UHGV-0208327_2	UniRef90	UniRef90_UPI001B365795	helix-turn-helix domain-containing protein	NA
UHGV-0208327_2	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0208327_2	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-0208327_2	COG	COG2452	Predicted site-specific integrase-resolvase	NA
UHGV-0208327_3	eggNOG-mapper	226185.EF_1434	Helix-turn-helix domain	NA
UHGV-0208327_3	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0208327_3	Structural annotation	PF01978, MF_01819, NF041230, COG3355	NA	NA
UHGV-0208327_4	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0208327_4	PHROG	phrog_3277	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0208327_4	UniRef90	UniRef90_UPI001B37FC83	ATP-binding protein	NA
UHGV-0208327_4	eggNOG-mapper	1236514.BAKL01000051_gene3706	NA	NA
UHGV-0208327_4	Structural annotation	PF01695, MF_01158, NF005992, COG1484	NA	NA
UHGV-0208327_6	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0208327_6	PHROG	phrog_589	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0208327_6	UniRef90	UniRef90_UPI001B371CB0	HNH endonuclease	NA
UHGV-0208327_6	eggNOG-mapper	1267535.KB906767_gene146	HNH nucleases	NA
UHGV-0208327_6	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0208327_6	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0208327_7	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0208327_7	PHROG	phrog_1	integrase	integration and excision
UHGV-0208327_7	UniRef90	UniRef90_UPI001B395E60	tyrosine-type recombinase/integrase	NA
UHGV-0208327_7	eggNOG-mapper	1433126.BN938_0085	Belongs to the 'phage' integrase family	NA
UHGV-0208327_7	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208327_7	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0208327_7	Structural annotation	PF00589, PF02899, MF_01807, NF001399, COG4974	NA	NA
UHGV-0208327_9	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0208327_9	UniRef90	UniRef90_UPI001B38A19C	phage terminase small subunit P27 family	NA
UHGV-0208327_9	eggNOG-mapper	1433126.BN938_0084	Phage terminase, small subunit	NA
UHGV-0208327_9	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0208327_9	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0208327_9	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0208327_9	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0208327_10	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0208327_10	UniRef90	UniRef90_UPI001B36B044	phage portal protein	NA
UHGV-0208327_10	eggNOG-mapper	2754.EH55_13175	Terminase	NA
UHGV-0208327_10	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0208327_10	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0208327_10	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0208327_10	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0208327_14	PHROG	phrog_12	portal protein	head and packaging
UHGV-0208327_14	UniRef90	UniRef90_UPI001EDCC252	phage portal protein	NA
UHGV-0208327_14	eggNOG-mapper	1453501.JELR01000001_gene2530	Phage portal protein	NA
UHGV-0208327_14	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0208327_14	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0208327_14	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0208327_14	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0208327_15	KOfam	K06904	NA	NA
UHGV-0208327_15	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0208327_15	UniRef90	UniRef90_UPI001B387660	HK97 family phage prohead protease	NA
UHGV-0208327_15	eggNOG-mapper	1246626.BleG1_2883	Caudovirus prohead serine protease	NA
UHGV-0208327_15	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0208327_15	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0208327_15	COG	COG3740	Phage head maturation protease	NA
UHGV-0208327_15	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0208327_16	KOfam	K07317	K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-0208327_16	PHROG	phrog_16674	DNA methyltransferase	other
UHGV-0208327_16	UniRef90	UniRef90_A0A4Z0V3N9	Site-specific DNA-methyltransferase (adenine-specific)	NA
UHGV-0208327_16	eggNOG-mapper	760192.Halhy_5555	Eco57I restriction-modification methylase	NA
UHGV-0208327_16	PADLOC	MTase_II_00099	Type II methyltransferase	RM
UHGV-0208327_16	Pfam	PF07669	Eco57I restriction-modification methylase	Eco57I
UHGV-0208327_16	Pfam	PF12950	TaqI-like C-terminal specificity domain	TaqI_C
UHGV-0208327_16	COG	COG0827	Adenine-specific DNA N6-methylase	NA
UHGV-0208327_16	Structural annotation	PF02384, PF20466, MF_01872, NF033451, COG0286	NA	NA
UHGV-0208327_17	UniRef90	UniRef90_A0A4Z0V4L5	Restriction endonuclease	NA
UHGV-0208327_17	eggNOG-mapper	760192.Halhy_5554	Restriction endonuclease XhoI	NA
UHGV-0208327_17	PADLOC	REase_II_00142	Type II restriction enzyme	RM
UHGV-0208327_17	Pfam	PF04555	Restriction endonuclease XhoI	XhoI
UHGV-0208327_18	PHROG	phrog_10	major head protein	head and packaging
UHGV-0208327_18	UniRef90	UniRef90_UPI001B36C5F7	phage major capsid protein	NA
UHGV-0208327_18	eggNOG-mapper	1433126.BN938_0523	Phage capsid family	NA
UHGV-0208327_18	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0208327_18	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0208327_18	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0208327_18	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0208327_19	PHROG	phrog_442	head-tail adaptor	connector
UHGV-0208327_19	UniRef90	UniRef90_UPI001B364E4B	phage gp6-like head-tail connector protein	NA
UHGV-0208327_19	eggNOG-mapper	1144305.PMI02_04884	NA	NA
UHGV-0208327_19	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0208327_19	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0208327_19	Structural annotation	PF05135, TIGR02215	NA	NA
UHGV-0208327_20	UniRef90	UniRef90_UPI001B38FDA0	head-tail adaptor protein	NA
UHGV-0208327_20	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0208327_20	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0208327_21	UniRef90	UniRef90_UPI001B3652B9	HK97 gp10 family phage protein	NA
UHGV-0208327_21	eggNOG-mapper	1433126.BN938_0520	NA	NA
UHGV-0208327_21	Structural annotation	PF06763, TIGR01725	NA	NA
UHGV-0208327_22	Structural annotation	PF11367	NA	NA
UHGV-0208327_23	PHROG	phrog_1407	major tail protein	tail
UHGV-0208327_23	UniRef90	UniRef90_UPI001B37470A	phage tail tube protein	NA
UHGV-0208327_23	eggNOG-mapper	1122931.AUAE01000036_gene1068	Phage tail tube protein	NA
UHGV-0208327_23	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-0208327_23	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0208327_24	Structural annotation	PF11836	NA	NA
UHGV-0208327_27	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-0208327_27	PHROG	phrog_56	DNA methyltransferase	other
UHGV-0208327_27	UniRef90	UniRef90_UPI001B35823F	DNA adenine methylase	NA
UHGV-0208327_27	eggNOG-mapper	1433126.BN938_0136	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-0208327_27	PADLOC	MTase_II_00039	Type II methyltransferase	RM
UHGV-0208327_27	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-0208327_27	COG	COG0338	DNA-adenine methylase	NA
UHGV-0208327_27	Structural annotation	PF02086, MF_00934, TIGR00571, COG0338	NA	NA
UHGV-0208327_28	UniRef90	UniRef90_UPI001B36C5A9	MmcQ/YjbR family DNA-binding protein	NA
UHGV-0208327_28	eggNOG-mapper	1203611.KB894542_gene778	YjbR	NA
UHGV-0208327_28	Pfam	PF04237	YjbR	YjbR
UHGV-0208327_28	COG	COG2315	Predicted DNA-binding protein with 'double-wing' structural motif, MmcQ/YjbR family	NA
UHGV-0208327_29	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0208327_29	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0208327_29	UniRef90	UniRef90_UPI001B37530A	site-specific DNA-methyltransferase	NA
UHGV-0208327_29	eggNOG-mapper	1122173.AXVL01000018_gene452	DNA methylase	NA
UHGV-0208327_29	PADLOC	MTase_II_00173	Type II methyltransferase	RM
UHGV-0208327_29	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0208327_29	COG	COG0863	DNA modification methylase	NA
UHGV-0208327_29	Structural annotation	PF01555, MF_01872, NF008572, COG0863	NA	NA
UHGV-0208327_30	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0208327_30	UniRef90	UniRef90_UPI00101BBD21	phosphoadenosine phosphosulfate reductase	NA
UHGV-0208327_30	eggNOG-mapper	1378168.N510_01911	NA	NA
UHGV-0208327_30	PADLOC	SspD_00001	SspD	SSP
UHGV-0208327_30	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0208327_30	Structural annotation	PF01507, MF_00064, NF006327, COG0175	NA	NA
UHGV-0208327_31	PHROG	phrog_1987	NA	unknown function
UHGV-0208327_32	Structural annotation	PF15513, COG5353	NA	NA
UHGV-0208327_36	Structural annotation	PF02185	NA	NA
UHGV-0208327_38	PHROG	phrog_30639	NA	unknown function
UHGV-0208327_38	eggNOG-mapper	1433126.BN938_0140	NA	NA
UHGV-0208327_38	Structural annotation	PF18975, PF10916, MF_01282, NF000022, COG4257, COG4379	NA	NA
UHGV-0208327_40	PHROG	phrog_873	endolysin	head and packaging
UHGV-0208327_40	UniRef90	UniRef90_UPI001B3821E9	structural protein P5	NA
UHGV-0208327_40	eggNOG-mapper	1433126.BN938_0138	NA	NA
UHGV-0208327_41	KOfam	K20361	USO1; intracellular protein transport protein USO1	NA
UHGV-0208327_41	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0208327_41	UniRef90	UniRef90_UPI000C15DCE7	phage tail length tape measure family protein	NA
UHGV-0208327_41	eggNOG-mapper	1433126.BN938_0515	domain protein	NA
UHGV-0208327_41	COG	COG5283	Phage-related tail protein	NA
UHGV-0208327_41	Structural annotation	PF05537, TIGR01760, COG3941	NA	NA
UHGV-0208327_42	PHROG	phrog_27609	NA	unknown function
UHGV-0208327_42	UniRef90	UniRef90_UPI001CDA75B6	cytochrome P450	NA
UHGV-0208327_42	eggNOG-mapper	709991.Odosp_3308	NA	NA
UHGV-0208327_43	PHROG	phrog_26822	NA	unknown function
UHGV-0208327_43	UniRef90	UniRef90_A0A060R6K6	Phage capsid and scaffold	NA
UHGV-0208327_43	eggNOG-mapper	1433126.BN938_0512	NA	NA
UHGV-0208327_44	PHROG	phrog_3267	tail protein	tail
UHGV-0208327_44	UniRef90	UniRef90_A0A060R5V5	NA	NA
UHGV-0208327_44	eggNOG-mapper	1433126.BN938_0123	NA	NA
UHGV-0208327_45	PHROG	phrog_19691	virion structural protein	head and packaging
UHGV-0208327_45	eggNOG-mapper	1433126.BN938_0126	NA	NA
UHGV-0208327_46	PHROG	phrog_17180	NA	unknown function
UHGV-0208327_46	eggNOG-mapper	1268240.ATFI01000012_gene1337	NA	NA
UHGV-0208327_47	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0208327_47	PHROG	phrog_1	integrase	integration and excision
UHGV-0208327_47	UniRef90	UniRef90_UPI001B36921E	site-specific integrase	NA
UHGV-0208327_47	eggNOG-mapper	1433126.BN938_0141	Belongs to the 'phage' integrase family	NA
UHGV-0208327_47	Pfam	PF17293	Arm DNA-binding domain	Arm-DNA-bind_5
UHGV-0208327_47	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0208327_47	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0208327_47	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0208327_47	Structural annotation	PF00589, PF13102, PF17293, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0208327_48	KOfam	K00290	LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]	NA
UHGV-0208327_48	UniRef90	UniRef90_J9CJ78	Saccharopine dehydrogenase	NA
UHGV-0208327_48	eggNOG-mapper	1033732.CAHI01000015_gene450	Saccharopine dehydrogenase	NA
UHGV-0208327_48	Pfam	PF03435	Saccharopine dehydrogenase NADP binding domain	Sacchrp_dh_NADP
UHGV-0208327_48	COG	COG1748	Saccharopine dehydrogenase, NADP-dependent	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0208327	Yes	39,427 bps	52.39%	92.60%	0.9550
UHGV-0087348	No	37,722 bps	52.45%	88.60%	0.9635
UHGV-1935239	No	37,533 bps	52.48%	88.15%	0.9633
UHGV-2117998	No	37,533 bps	52.48%	88.15%	0.9633
UHGV-2199785	No	35,818 bps	53.17%	83.70%	0.9556
UHGV-0138087	No	19,343 bps	53.00%	45.19%	0.9617
UHGV-1385762	No	30,135 bps	52.14%	42.84%	0.9635
UHGV-2222743	No	17,756 bps	51.39%	41.98%	0.9527
UHGV-0131972	No	21,637 bps	54.27%	31.57%	0.9522
UHGV-1638119	No	21,637 bps	54.27%	31.57%	0.9522
UHGV-1976794	No	21,590 bps	54.24%	31.50%	0.9624
UHGV-2240747	No	21,119 bps	53.07%	21.81%	0.9280
UHGV-1809170	No	12,888 bps	52.67%	14.66%	0.9513