vOTU-016877

Overview

vOTU representative UHGV-0198704

No. of genomes 9

Genome length 50,679 bps

Completeness 65.99% (medium-quality)

Host UMGS1696 sp900554225

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-016877
Number of genomes	9
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00102 › vSUBFAM-00709 › vGENUS-00656 › vOTU-016877
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › CAG-272 › UMGS1696 › UMGS1696 sp900554225
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0198704
BioSample	SAMN05414962
Genome length	50,679 bps
CheckV completeness	65.99% (medium-quality)
CheckV contamination	0.00%
CDS count	70
CDS density	92.71%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0198704_2	eggNOG-mapper	1298920.KI911353_gene541	ATPase involved in DNA repair	NA
UHGV-0198704_2	COG	COG0419	DNA repair exonuclease SbcCD ATPase subunit	NA
UHGV-0198704_3	UniRef90	UniRef90_R5IRZ6	NA	NA
UHGV-0198704_3	eggNOG-mapper	931626.Awo_c11420	Listeria-Bacteroides repeat domain (List_Bact_rpt)	NA
UHGV-0198704_3	Pfam	PF19789	NA	DUF6273
UHGV-0198704_3	COG	COG3209	NA	NA
UHGV-0198704_3	Structural annotation	PF19789	NA	NA
UHGV-0198704_4	PHROG	phrog_13589	NA	unknown function
UHGV-0198704_4	eggNOG-mapper	1298920.KI911353_gene4836	ATPase involved in DNA repair	NA
UHGV-0198704_4	COG	COG0419	DNA repair exonuclease SbcCD ATPase subunit	NA
UHGV-0198704_5	PHROG	phrog_3904	tail fiber protein	tail
UHGV-0198704_5	COG	COG4926	Phage-related protein	NA
UHGV-0198704_5	Structural annotation	PF10651	NA	NA
UHGV-0198704_8	eggNOG-mapper	1449126.JQKL01000002_gene1688	NA	NA
UHGV-0198704_8	Structural annotation	PF11134, NF038128, COG5276	NA	NA
UHGV-0198704_9	Structural annotation	PF20387	NA	NA
UHGV-0198704_11	PHROG	phrog_14242	major head protein	head and packaging
UHGV-0198704_11	UniRef90	UniRef90_A0A3D2CI53	Phage major capsid protein	NA
UHGV-0198704_11	eggNOG-mapper	935948.KE386495_gene2267	NA	NA
UHGV-0198704_11	NCBIFam	NF033394.1	phage major capsid protein	NA
UHGV-0198704_11	Structural annotation	PF17236, MF_04133, NF033394, COG4653	NA	NA
UHGV-0198704_13	PHROG	phrog_156	portal protein	head and packaging
UHGV-0198704_13	eggNOG-mapper	588581.Cpap_1526	NA	NA
UHGV-0198704_13	Structural annotation	PF16510, MF_04120, TIGR01538, COG4383	NA	NA
UHGV-0198704_16	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0198704_16	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0198704_16	UniRef90	UniRef90_UPI001C30E6F9	PBSX family phage terminase large subunit	NA
UHGV-0198704_16	eggNOG-mapper	696281.Desru_1088	Phage terminase large subunit	NA
UHGV-0198704_16	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0198704_16	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0198704_16	COG	COG1783	Phage terminase large subunit	NA
UHGV-0198704_16	Structural annotation	PF04466, PF20454, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0198704_17	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-0198704_17	UniRef90	UniRef90_UPI001D02F64C	DNA-packaging protein	NA
UHGV-0198704_17	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0198704_17	Structural annotation	PF16677	NA	NA
UHGV-0198704_20	Structural annotation	PF19923, NF009981, COG0355	NA	NA
UHGV-0198704_21	Structural annotation	PF01381, NF040522, COG1476	NA	NA
UHGV-0198704_22	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0198704_22	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0198704_22	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0198704_22	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0198704_22	Structural annotation	PF01381, NF041951, COG1476, COG4068	NA	NA
UHGV-0198704_24	PHROG	phrog_3292	NA	unknown function
UHGV-0198704_24	UniRef90	UniRef90_M1WWV3	KTSC domain-containing protein	NA
UHGV-0198704_24	eggNOG-mapper	87626.PTD2_14877	KTSC domain	NA
UHGV-0198704_24	Pfam	PF13619	KTSC domain	KTSC
UHGV-0198704_24	Structural annotation	PF13619	NA	NA
UHGV-0198704_26	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0198704_26	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0198704_26	UniRef90	UniRef90_D2U099	Phage transcriptional regulator	NA
UHGV-0198704_26	eggNOG-mapper	1443113.LC20_02249	Helix-turn-helix XRE-family like proteins	NA
UHGV-0198704_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0198704_26	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0198704_26	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-0198704_27	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0198704_27	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0198704_27	UniRef90	UniRef90_R9K5V7	HTH cro/C1-type domain-containing protein	NA
UHGV-0198704_27	eggNOG-mapper	397290.C810_05152	DNA-binding helix-turn-helix protein	NA
UHGV-0198704_27	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0198704_27	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0198704_27	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0198704_35	PHROG	phrog_14970	NA	unknown function
UHGV-0198704_35	UniRef90	UniRef90_UPI00164BFA28	Rad52/Rad22 family DNA repair protein	NA
UHGV-0198704_35	eggNOG-mapper	411470.RUMGNA_02193	double-strand break repair protein	NA
UHGV-0198704_35	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-0198704_35	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0198704_35	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0198704_37	PHROG	phrog_2205	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0198704_37	UniRef90	UniRef90_A0A1T4YHV2	Bacteriophage Mu Gam like protein	NA
UHGV-0198704_37	eggNOG-mapper	1203606.HMPREF1526_01878	Bacteriophage Mu Gam like protein	NA
UHGV-0198704_37	Pfam	PF07352	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
UHGV-0198704_37	Structural annotation	PF07352	NA	NA
UHGV-0198704_38	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0198704_38	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-0198704_38	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0198704_38	Structural annotation	PF05772	NA	NA
UHGV-0198704_39	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0198704_39	eggNOG-mapper	941770.GL622178_gene367	Replication initiation and membrane attachment	NA
UHGV-0198704_39	COG	COG3756	NA	NA
UHGV-0198704_40	PHROG	phrog_9804	NA	unknown function
UHGV-0198704_40	UniRef90	UniRef90_A0A845QMW0	Inhibitor_G39P domain-containing protein	NA
UHGV-0198704_40	eggNOG-mapper	1499683.CCFF01000013_gene503	Loader and inhibitor of phage G40P	NA
UHGV-0198704_40	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0198704_40	Structural annotation	PF11417	NA	NA
UHGV-0198704_46	UniRef90	UniRef90_A0A098GES5	Putative phage associated protein	NA
UHGV-0198704_46	Structural annotation	PF01423, MF_00257, NF001963, COG1958	NA	NA
UHGV-0198704_54	Pfam	PF04448	NA	DUF551
UHGV-0198704_55	UniRef90	UniRef90_A0A1I3J1T2	NA	NA
UHGV-0198704_55	Pfam	PF04448	NA	DUF551
UHGV-0198704_55	Structural annotation	PF04448, NF041588	NA	NA
UHGV-0198704_56	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0198704_56	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0198704_56	UniRef90	UniRef90_UPI00164A78A3	dUTP diphosphatase	NA
UHGV-0198704_56	eggNOG-mapper	1282887.AUJG01000016_gene1113	NA	NA
UHGV-0198704_56	Pfam	PF00692	dUTPase	dUTPase
UHGV-0198704_56	NCBIFam	TIGR00576.1	dUTP diphosphatase	NA
UHGV-0198704_56	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0198704_56	Structural annotation	PF00692, MF_00116, TIGR00576, COG0756	NA	NA
UHGV-0198704_58	PHROG	phrog_474	phosphofructokinase	other
UHGV-0198704_58	UniRef90	UniRef90_UPI00103054B4	NA	NA
UHGV-0198704_58	eggNOG-mapper	1095750.HMPREF9970_1026	NA	NA
UHGV-0198704_58	Pfam	PF19905	NA	DUF6378
UHGV-0198704_58	Structural annotation	PF19905	NA	NA
UHGV-0198704_59	PHROG	phrog_4632	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0198704_59	UniRef90	UniRef90_A0A7X8IB41	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0198704_59	eggNOG-mapper	556263.FSEG_00477	NA	NA
UHGV-0198704_59	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0198704_60	UniRef90	UniRef90_UPI00156F0E9C	NA	NA
UHGV-0198704_60	eggNOG-mapper	999411.HMPREF1092_00897	NA	NA
UHGV-0198704_60	Structural annotation	PF14359, MF_03036, TIGR03646, COG3613	NA	NA
UHGV-0198704_61	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0198704_61	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0198704_61	UniRef90	UniRef90_A0A7C6GL00	Single-stranded DNA-binding protein	NA
UHGV-0198704_61	eggNOG-mapper	445972.ANACOL_04434	Single-stranded DNA-binding protein	NA
UHGV-0198704_61	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0198704_61	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0198704_61	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0198704_61	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0198704_61	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0198704_65	PHROG	phrog_22978	NA	unknown function
UHGV-0198704_65	eggNOG-mapper	1485543.JMME01000020_gene773	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)	NA
UHGV-0198704_65	Pfam	PF18814	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
UHGV-0198704_65	Pfam	PF18819	Phage MuF-C-terminal domain	MuF_C
UHGV-0198704_65	Pfam	PF18760	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
UHGV-0198704_65	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0198704_68	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0198704_70	PHROG	phrog_2172	NA	unknown function
UHGV-0198704_70	UniRef90	UniRef90_W1I4H7	Uncultured bacterium plasmid pRGI00071	NA
UHGV-0198704_70	eggNOG-mapper	1408311.JNJM01000024_gene619	Initiator Replication protein	NA
UHGV-0198704_70	Pfam	PF01051	Initiator Replication protein, WH1	Rep3_N
UHGV-0198704_70	Pfam	PF21205	Initiator Rep protein, WH2	Rep3_C
UHGV-0198704_70	COG	COG5527	Protein involved in initiation of plasmid replication	NA
UHGV-0198704_70	Structural annotation	PF01051, PF21205, NF038290, COG5527	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0198704	Yes	50,679 bps	49.95%	65.99%	0.9755
UHGV-1387020	No	31,514 bps	48.81%	54.51%	0.9771
UHGV-1430163	No	30,945 bps	48.82%	53.47%	0.9724
UHGV-0150337	No	18,058 bps	51.97%	31.45%	0.9811
UHGV-1675767	No	17,826 bps	51.98%	31.04%	0.9802
UHGV-1684500	No	17,548 bps	51.96%	30.56%	0.9802
UHGV-1768481	No	17,291 bps	48.48%	29.72%	0.9743
UHGV-1737903	No	15,387 bps	51.54%	26.81%	0.9760
UHGV-0144609	No	14,429 bps	51.87%	25.13%	0.9790