vOTU-017181

Overview

No. of genomes 13

Genome length 16,182 bps

Completeness 73.24% (medium-quality)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-017181
Number of genomes	13
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-06949 › vOTU-017181
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1415028
BioSample	SAMEA2467014
Genome length	16,182 bps
CheckV completeness	73.24% (medium-quality)
CheckV contamination	0.00%
CDS count	19
CDS density	90.31%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1415028_3	KOfam	K13925	pfbA; plasmin and fibronectin-binding protein A	NA
UHGV-1415028_3	eggNOG-mapper	1397699.JNIS01000001_gene2482	polygalacturonase activity	NA
UHGV-1415028_3	Pfam	PF12708	Pectate lyase superfamily protein	Pectate_lyase_3
UHGV-1415028_3	COG	COG5434	Polygalacturonase	NA
UHGV-1415028_4	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1415028_4	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-1415028_5	PHROG	phrog_2038	upper collar connector	connector
UHGV-1415028_5	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-1415028_5	eggNOG-mapper	10753.B7SSN1_BPNF	Phage Connector (GP10)	NA
UHGV-1415028_5	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1415028_5	Structural annotation	PF05352, MF_04120, TIGR01538, COG4695	NA	NA
UHGV-1415028_6	PHROG	phrog_2248	tail protein	tail
UHGV-1415028_6	UniRef90	UniRef90_A0A843HUB8	Caud_tail_N domain-containing protein	NA
UHGV-1415028_6	eggNOG-mapper	10756.DIT9_BPPH2	NA	NA
UHGV-1415028_6	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1415028_6	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1415028_6	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1415028_7	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1415028_7	UniRef90	UniRef90_A0A843HQR2	Ig-like domain-containing protein	NA
UHGV-1415028_7	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-1415028_7	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-1415028_7	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1415028_9	PHROG	phrog_11037	NA	unknown function
UHGV-1415028_9	UniRef90	UniRef90_A0A2Z4GUC1	Peptidoglycan hydrolase	NA
UHGV-1415028_9	eggNOG-mapper	1235796.C815_01287	pathogenesis	NA
UHGV-1415028_9	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-1415028_9	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-1415028_9	COG	COG3942	Surface antigen	NA
UHGV-1415028_9	Structural annotation	PF18013, PF05382, NF008096, COG3738	NA	NA
UHGV-1415028_10	PHROG	phrog_7698	endolysin	lysis
UHGV-1415028_10	UniRef90	UniRef90_A0A3B9GPW1	Cpl-7 domain-containing protein	NA
UHGV-1415028_10	eggNOG-mapper	1123315.AUIP01000001_gene1438	Cpl-7 lysozyme C-terminal domain protein	NA
UHGV-1415028_10	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-1415028_10	COG	COG1388	LysM repeat	NA
UHGV-1415028_10	Structural annotation	PF08230	NA	NA
UHGV-1415028_12	PHROG	phrog_6370	dsDNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1415028_12	Structural annotation	PF17548	NA	NA
UHGV-1415028_13	PHROG	phrog_6243	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1415028_13	UniRef90	UniRef90_A0A345BNN7	Single-stranded DNA-binding protein	NA
UHGV-1415028_13	eggNOG-mapper	307240.Q5ILD0_9VIRU	Pfam:Phi29_Phage_SSB	NA
UHGV-1415028_13	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-1415028_13	Structural annotation	PF17427	NA	NA
UHGV-1415028_14	Structural annotation	PF05435	NA	NA
UHGV-1415028_15	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1415028_15	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1415028_15	UniRef90	UniRef90_A0A355RJ67	DNA-directed DNA polymerase	NA
UHGV-1415028_15	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-1415028_15	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1415028_15	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-1415028_16	PHROG	phrog_2150	terminase	head and packaging
UHGV-1415028_16	UniRef90	UniRef90_A0A843HJW2	Phage DNA encapsidation protein	NA
UHGV-1415028_16	eggNOG-mapper	1094755.MCO_01569	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1415028_16	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1415028_16	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1415028	Yes	16,182 bps	39.77%	73.24%	0.9811
UHGV-1022503	No	15,987 bps	40.15%	72.41%	0.9814
UHGV-0859714	No	15,942 bps	39.94%	72.21%	0.9816
UHGV-2188301	No	15,942 bps	39.93%	72.21%	0.9810
UHGV-1418272	No	15,732 bps	40.19%	71.19%	0.9816
UHGV-0357308	No	15,684 bps	39.88%	71.08%	0.9819
UHGV-0058384	No	15,660 bps	39.89%	70.98%	0.9820
UHGV-1411853	No	15,660 bps	39.89%	70.82%	0.9820
UHGV-1411854	No	15,660 bps	39.89%	70.82%	0.9823
UHGV-1408290	No	13,122 bps	40.86%	59.50%	0.9816
UHGV-0066521	No	13,110 bps	40.84%	59.45%	0.9814
UHGV-1408298	No	13,110 bps	40.84%	59.45%	0.9814
UHGV-1649528	No	11,179 bps	41.27%	58.71%	0.9828