vOTU-017249

Overview

vOTU representative UHGV-1471917

No. of genomes 8

Genome length 62,513 bps

Completeness 76.32% (medium-quality)

Host Prevotella sp900543975

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-017249
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00009 › vSUBFAM-00291 › vGENUS-02426 › vOTU-017249
Host taxonomy	Bacteria › Bacteroidota › Bacteroidia › Bacteroidales › Bacteroidaceae › Prevotella › Prevotella sp900543975
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1471917
BioSample	SAMEA4545411
Genome length	62,513 bps
CheckV completeness	76.32% (medium-quality)
CheckV contamination	0.00%
CDS count	68
CDS density	85.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1471917_4	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-1471917_4	PHROG	phrog_1	integrase	integration and excision
UHGV-1471917_4	UniRef90	UniRef90_UPI001C2B9299	tyrosine-type recombinase/integrase	NA
UHGV-1471917_4	eggNOG-mapper	1236504.HMPREF2132_10995	Belongs to the 'phage' integrase family	NA
UHGV-1471917_4	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-1471917_4	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-1471917_4	Structural annotation	PF00589, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-1471917_6	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-1471917_6	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-1471917_6	UniRef90	UniRef90_A0A3R6E8G8	Reverse transcriptase domain-containing protein	NA
UHGV-1471917_6	eggNOG-mapper	445970.ALIPUT_02574	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-1471917_6	PADLOC	drt-UG27	DRT	DRT
UHGV-1471917_6	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-1471917_6	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-1471917_6	Structural annotation	PF00078, MF_04065, TIGR04416, COG3344	NA	NA
UHGV-1471917_7	UniRef90	UniRef90_A0A3R6HJL0	Ubiquitin carboxyl-hydrolase	NA
UHGV-1471917_7	eggNOG-mapper	547042.BACCOPRO_02126	NA	NA
UHGV-1471917_7	PADLOC	drt-cluster337	DRT	DRT
UHGV-1471917_8	eggNOG-mapper	445970.ALIPUT_02571	NA	NA
UHGV-1471917_8	PADLOC	drt-cluster346	DRT	DRT
UHGV-1471917_12	KOfam	K01258	pepT; tripeptide aminopeptidase [EC:3.4.11.4]	NA
UHGV-1471917_12	PHROG	phrog_4191	peptidase	other
UHGV-1471917_12	UniRef90	UniRef90_A0A6I7M9Z1	Acetyl-lysine deacetylase	NA
UHGV-1471917_12	eggNOG-mapper	742817.HMPREF9449_00545	NA	NA
UHGV-1471917_12	COG	COG2195	Di- or tripeptidase	NA
UHGV-1471917_12	Structural annotation	PF05343, MF_01120, TIGR01883, COG1363	NA	NA
UHGV-1471917_14	eggNOG-mapper	1077285.AGDG01000043_gene3425	NA	NA
UHGV-1471917_15	PHROG	phrog_11100	NA	unknown function
UHGV-1471917_16	Structural annotation	MF_00273	NA	NA
UHGV-1471917_21	PHROG	phrog_874	NA	unknown function
UHGV-1471917_21	eggNOG-mapper	762968.HMPREF9441_00541	NA	NA
UHGV-1471917_21	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-1471917_23	PHROG	phrog_8684	NA	unknown function
UHGV-1471917_23	UniRef90	UniRef90_A0A3D6E9B9	YopX domain-containing protein	NA
UHGV-1471917_23	eggNOG-mapper	40522.A8ASP1_BPA50	YopX protein	NA
UHGV-1471917_23	Pfam	PF09643	YopX protein	YopX
UHGV-1471917_23	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-1471917_23	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1471917_24	eggNOG-mapper	1236504.HMPREF2132_11055	DNA restriction-modification system	NA
UHGV-1471917_24	COG	COG0827	Adenine-specific DNA N6-methylase	NA
UHGV-1471917_26	PHROG	phrog_10156	NA	unknown function
UHGV-1471917_26	eggNOG-mapper	742727.HMPREF9447_04840	NA	NA
UHGV-1471917_27	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-1471917_27	PHROG	phrog_864	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-1471917_27	UniRef90	UniRef90_UPI001C2C5599	NA	NA
UHGV-1471917_27	eggNOG-mapper	1236504.HMPREF2132_11050	Phage plasmid primase, P4 family domain protein	NA
UHGV-1471917_27	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-1471917_27	Pfam	PF19263	NA	DUF5906
UHGV-1471917_27	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-1471917_27	Structural annotation	PF04735, MF_04000, TIGR01613, COG3378	NA	NA
UHGV-1471917_30	eggNOG-mapper	1236504.HMPREF2132_11155	NA	NA
UHGV-1471917_30	Structural annotation	PF06152, TIGR01641	NA	NA
UHGV-1471917_31	PHROG	phrog_64	portal protein	head and packaging
UHGV-1471917_31	UniRef90	UniRef90_A0A412VAZ6	Phage portal protein	NA
UHGV-1471917_31	eggNOG-mapper	1227266.HMPREF1551_00519	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1471917_31	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1471917_31	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-1471917_32	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-1471917_32	UniRef90	UniRef90_A0A3R5XWW2	HintN domain-containing protein	NA
UHGV-1471917_32	eggNOG-mapper	1236504.HMPREF2132_11175	Terminase-like family	NA
UHGV-1471917_32	Pfam	PF14528	LAGLIDADG-like domain	LAGLIDADG_3
UHGV-1471917_32	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1471917_32	COG	COG5362	Phage terminase large subunit	NA
UHGV-1471917_32	Structural annotation	PF04466, PF05203, PF20441, MF_04146, TIGR01547, NF005852, COG4373, COG1372	NA	NA
UHGV-1471917_34	Structural annotation	PF21430	NA	NA
UHGV-1471917_35	PHROG	phrog_29	major head protein	head and packaging
UHGV-1471917_35	UniRef90	UniRef90_A0A8B2AWS5	Major capsid protein	NA
UHGV-1471917_35	Structural annotation	PF03864, MF_04133, TIGR04387, COG4834	NA	NA
UHGV-1471917_36	eggNOG-mapper	1236504.HMPREF2132_11200	NA	NA
UHGV-1471917_36	Structural annotation	PF20449	NA	NA
UHGV-1471917_37	Structural annotation	PF19586, TIGR01563, COG5614	NA	NA
UHGV-1471917_39	eggNOG-mapper	742727.HMPREF9447_04835	NA	NA
UHGV-1471917_39	Structural annotation	PF06141	NA	NA
UHGV-1471917_40	Structural annotation	PF08813, TIGR01603, COG5437	NA	NA
UHGV-1471917_41	eggNOG-mapper	1236504.HMPREF2132_11225	NA	NA
UHGV-1471917_43	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-1471917_43	UniRef90	UniRef90_A0A415VJ71	TMP_3 domain-containing protein	NA
UHGV-1471917_43	eggNOG-mapper	742727.HMPREF9447_04839	tape measure	NA
UHGV-1471917_43	COG	COG1511	NA	NA
UHGV-1471917_44	eggNOG-mapper	1236504.HMPREF2132_11265	NA	NA
UHGV-1471917_44	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-1471917_45	PHROG	phrog_17422	NA	unknown function
UHGV-1471917_45	eggNOG-mapper	1121100.JCM6294_565	Phage minor structural protein	NA
UHGV-1471917_45	COG	COG4926	Phage-related protein	NA
UHGV-1471917_45	Structural annotation	PF14594, NF033848, COG4926	NA	NA
UHGV-1471917_46	PHROG	phrog_3267	tail protein	tail
UHGV-1471917_46	UniRef90	UniRef90_R6DH83	Phage gp373 protein	NA
UHGV-1471917_46	eggNOG-mapper	1392486.JIAF01000004_gene2044	NA	NA
UHGV-1471917_46	Structural annotation	PF02010, MF_04116, NF010681, COG1361	NA	NA
UHGV-1471917_47	Pfam	PF02018	Carbohydrate binding domain	CBM_4_9
UHGV-1471917_47	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-1471917_47	Structural annotation	PF00629, PF03921, NF033675, COG3354	NA	NA
UHGV-1471917_48	Structural annotation	PF12866, PF13620, PF20942, NF040788, COG2351	NA	NA
UHGV-1471917_49	UniRef90	UniRef90_A0A3C1AA88	Four helix bundle protein	NA
UHGV-1471917_49	Structural annotation	PF05635, NF033474, COG3781	NA	NA
UHGV-1471917_50	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-1471917_50	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-1471917_50	UniRef90	UniRef90_UPI001C2C8EC1	RNA-directed DNA polymerase	NA
UHGV-1471917_50	eggNOG-mapper	411479.BACUNI_00629	COG COG3344 Retron-type reverse transcriptase	NA
UHGV-1471917_50	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-1471917_50	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-1471917_50	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-1471917_50	Structural annotation	PF00078, MF_04065, TIGR04416, COG3344	NA	NA
UHGV-1471917_51	UniRef90	UniRef90_UPI001C49131D	NA	NA
UHGV-1471917_51	eggNOG-mapper	411479.BACUNI_00733	NA	NA
UHGV-1471917_51	Pfam	PF14301	NA	DUF4376
UHGV-1471917_51	Structural annotation	PF14301	NA	NA
UHGV-1471917_53	eggNOG-mapper	411479.BACUNI_00732	NA	NA
UHGV-1471917_53	Structural annotation	PF06197	NA	NA
UHGV-1471917_54	PHROG	phrog_15037	NA	unknown function
UHGV-1471917_54	UniRef90	UniRef90_A0A7U3RL93	Holin (Fragment)	NA
UHGV-1471917_54	eggNOG-mapper	657309.BXY_08050	NA	NA
UHGV-1471917_54	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1471917_55	KOfam	K01185	E3.2.1.17; lysozyme [EC:3.2.1.17]	NA
UHGV-1471917_55	PHROG	phrog_7	endolysin	lysis
UHGV-1471917_55	UniRef90	UniRef90_UPI000D10C356	lysozyme	NA
UHGV-1471917_55	eggNOG-mapper	679190.HMPREF0650_1968	lysozyme	NA
UHGV-1471917_55	Pfam	PF00959	Phage lysozyme	Phage_lysozyme
UHGV-1471917_55	COG	COG3772	Phage-related lysozyme (muramidase), GH24 family	NA
UHGV-1471917_55	HAMAP	MF_04110	Endolysin	NA
UHGV-1471917_55	Structural annotation	PF00959, MF_04110, COG3772	NA	NA
UHGV-1471917_56	eggNOG-mapper	679190.HMPREF0650_1967	NA	NA
UHGV-1471917_58	UniRef90	UniRef90_UPI001C2B78AF	helix-turn-helix domain-containing protein	NA
UHGV-1471917_58	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-1471917_58	Structural annotation	PF05930, NF033499, COG3311	NA	NA
UHGV-1471917_59	PHROG	phrog_16490	NA	unknown function
UHGV-1471917_59	UniRef90	UniRef90_A0A7M1RZU0	Spike protein/glycoprotein	NA
UHGV-1471917_59	eggNOG-mapper	411901.BACCAC_01112	NA	NA
UHGV-1471917_60	PHROG	phrog_31654	NA	unknown function
UHGV-1471917_60	eggNOG-mapper	742725.HMPREF9450_02106	NA	NA
UHGV-1471917_61	PHROG	phrog_28898	NA	unknown function
UHGV-1471917_61	eggNOG-mapper	411901.BACCAC_01110	NA	NA
UHGV-1471917_61	Structural annotation	PF10781	NA	NA
UHGV-1471917_63	PHROG	phrog_38431	NA	unknown function
UHGV-1471917_63	UniRef90	UniRef90_R5U340	Conserved domain protein	NA
UHGV-1471917_63	eggNOG-mapper	411901.BACCAC_01108	NA	NA
UHGV-1471917_64	eggNOG-mapper	762982.HMPREF9442_01206	NA	NA
UHGV-1471917_67	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-1471917_67	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-1471917_67	UniRef90	UniRef90_A0A2T4TU74	dUTPase domain-containing protein	NA
UHGV-1471917_67	eggNOG-mapper	679189.HMPREF9019_0917	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	NA
UHGV-1471917_67	Pfam	PF00692	dUTPase	dUTPase
UHGV-1471917_67	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-1471917_67	Structural annotation	PF00692, MF_00116, NF001862, COG0756	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1471917	Yes	62,513 bps	51.06%	76.32%	0.9730
UHGV-1538521	No	63,792 bps	50.99%	77.88%	0.9709
UHGV-1467283	No	62,753 bps	50.96%	76.62%	0.9741
UHGV-1472212	No	62,476 bps	51.07%	76.28%	0.9752
UHGV-1413691	No	60,094 bps	51.16%	73.30%	0.9723
UHGV-1840759	No	21,365 bps	53.80%	25.81%	0.9728
UHGV-1805878	No	15,766 bps	49.58%	19.07%	0.9547
UHGV-1764857	No	13,834 bps	50.12%	17.28%	0.9718