vOTU-017446

Overview

vOTU representative UHGV-0200925

No. of genomes 7

Genome length 34,913 bps

Completeness 76.17% (medium-quality)

Host UBA11524 sp000437595

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-017446
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-00582 › vGENUS-05471 › vOTU-017446
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › CAG-74 › UBA11524 › UBA11524 sp000437595
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0200925
BioSample	SAMN06164654
Genome length	34,913 bps
CheckV completeness	76.17% (medium-quality)
CheckV contamination	0.00%
CDS count	36
CDS density	94.09%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0200925_2	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-0200925_2	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0200925_2	UniRef90	UniRef90_W0FHI1	Methyltransferase	NA
UHGV-0200925_2	eggNOG-mapper	1121289.JHVL01000007_gene2766	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0200925_2	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0200925_2	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0200925_2	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0200925_2	COG	COG0863	DNA modification methylase	NA
UHGV-0200925_2	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0200925_3	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0200925_3	UniRef90	UniRef90_A0A1Q6PU38	Terminase	NA
UHGV-0200925_3	eggNOG-mapper	1209989.TepiRe1_2607	Phage terminase, small subunit	NA
UHGV-0200925_3	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0200925_3	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0200925_3	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0200925_3	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0200925_4	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0200925_4	UniRef90	UniRef90_A0A1Q6PTP4	Terminase	NA
UHGV-0200925_4	eggNOG-mapper	1408324.JNJK01000006_gene1378	Phage Terminase	NA
UHGV-0200925_4	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0200925_4	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0200925_4	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0200925_4	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0200925_5	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0200925_5	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0200925_5	UniRef90	UniRef90_A0A2V2FKC0	HNH endonuclease	NA
UHGV-0200925_5	eggNOG-mapper	97139.C824_04754	HNH endonuclease	NA
UHGV-0200925_5	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0200925_5	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0200925_5	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0200925_6	PHROG	phrog_12	portal protein	head and packaging
UHGV-0200925_6	UniRef90	UniRef90_A0A2V2FJ22	Phage portal protein	NA
UHGV-0200925_6	eggNOG-mapper	1121289.JHVL01000007_gene2755	Phage portal protein, HK97 family	NA
UHGV-0200925_6	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0200925_6	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0200925_6	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0200925_6	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0200925_7	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0200925_7	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0200925_7	UniRef90	UniRef90_UPI001D0757BC	DNA cytosine methyltransferase	NA
UHGV-0200925_7	eggNOG-mapper	1410624.JNKK01000051_gene2474	C-5 cytosine-specific DNA methylase	NA
UHGV-0200925_7	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-0200925_7	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0200925_7	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0200925_7	Structural annotation	PF12847, NF041081	NA	NA
UHGV-0200925_8	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0200925_8	PHROG	phrog_38038	NA	unknown function
UHGV-0200925_8	UniRef90	UniRef90_A0A410PTN3	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0200925_8	eggNOG-mapper	1216932.CM240_1398	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0200925_8	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-0200925_8	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0200925_8	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0200925_8	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-0200925_9	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0200925_9	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0200925_9	UniRef90	UniRef90_A0A2V2FK72	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0200925_9	eggNOG-mapper	1235802.C823_05277	Clp protease	NA
UHGV-0200925_9	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0200925_9	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0200925_9	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0200925_10	PHROG	phrog_10	major head protein	head and packaging
UHGV-0200925_10	UniRef90	UniRef90_A0A2V2FGW4	Phage major capsid protein	NA
UHGV-0200925_10	eggNOG-mapper	696281.Desru_3549	TIGRFAM phage major capsid protein, HK97 family	NA
UHGV-0200925_10	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0200925_10	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0200925_10	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0200925_10	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0200925_11	PHROG	phrog_12102	NA	unknown function
UHGV-0200925_11	UniRef90	UniRef90_A0A7C6BMC0	Head fiber protein	NA
UHGV-0200925_11	eggNOG-mapper	689781.AUJX01000031_gene111	NA	NA
UHGV-0200925_12	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0200925_12	UniRef90	UniRef90_A0A7C6BLP4	Phage gp6-like head-tail connector protein	NA
UHGV-0200925_12	eggNOG-mapper	1388763.O165_022245	DNA packaging	NA
UHGV-0200925_12	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0200925_12	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0200925_12	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0200925_13	PHROG	phrog_25	head closure Hc1	connector
UHGV-0200925_13	UniRef90	UniRef90_A0A7X7FI16	Phage head closure protein	NA
UHGV-0200925_13	eggNOG-mapper	1027292.HMPREF9372_1256	Phage head-tail adaptor	NA
UHGV-0200925_13	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0200925_13	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0200925_13	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0200925_13	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0200925_14	Structural annotation	PF05657	NA	NA
UHGV-0200925_15	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0200925_15	UniRef90	UniRef90_A0A0L0W654	Phage protein, HK97 gp10 family	NA
UHGV-0200925_15	eggNOG-mapper	431943.CKL_4062	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0200925_15	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0200925_15	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0200925_15	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-0200925_16	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0200925_16	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0200925_16	UniRef90	UniRef90_UPI001C63C090	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0200925_16	eggNOG-mapper	398512.JQKC01000005_gene5430	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0200925_16	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0200925_16	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0200925_16	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA
UHGV-0200925_17	PHROG	phrog_88	major tail protein	tail
UHGV-0200925_17	UniRef90	UniRef90_A0A7C6BMC6	Phage tail protein	NA
UHGV-0200925_17	eggNOG-mapper	1382315.JPOI01000001_gene276	Phage major tail protein phi13	NA
UHGV-0200925_17	Pfam	PF04630	Phage tail tube protein	Phage_TTP_1
UHGV-0200925_17	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0200925_17	COG	COG5276	NA	NA
UHGV-0200925_17	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0200925_18	eggNOG-mapper	1196031.ALEG01000039_gene1823	NA	NA
UHGV-0200925_20	KOfam	K07063	NA	NA
UHGV-0200925_20	PHROG	phrog_14427	NA	unknown function
UHGV-0200925_20	UniRef90	UniRef90_A0A231NS41	Putative toxin-antitoxin system toxin component, PIN family	NA
UHGV-0200925_20	eggNOG-mapper	335541.Swol_1975	PIN domain	NA
UHGV-0200925_20	Pfam	PF13470	PIN domain	PIN_3
UHGV-0200925_20	NCBIFam	TIGR00305.1	putative toxin-antitoxin system toxin component, PIN family	NA
UHGV-0200925_20	COG	COG1569	Predicted nucleic acid-binding protein, contains PIN domain	NA
UHGV-0200925_21	KOfam	K19156	prlF, sohA; antitoxin PrlF	NA
UHGV-0200925_21	UniRef90	UniRef90_A0A2N2NRJ3	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA
UHGV-0200925_21	eggNOG-mapper	335541.Swol_1976	PFAM SpoVT AbrB	NA
UHGV-0200925_21	Pfam	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
UHGV-0200925_21	NCBIFam	TIGR01439.1	transcriptional regulator, AbrB family	NA
UHGV-0200925_21	COG	COG2002	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	NA
UHGV-0200925_22	KOfam	K20283	GOLGA4; golgin subfamily A member 4	NA
UHGV-0200925_22	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-0200925_22	UniRef90	UniRef90_A0A1Q6PTR6	Phage tail tape measure protein	NA
UHGV-0200925_22	eggNOG-mapper	1121864.OMO_01316	Phage-related minor tail protein	NA
UHGV-0200925_22	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0200925_22	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0200925_22	COG	COG5283	Phage-related tail protein	NA
UHGV-0200925_22	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0200925_23	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0200925_23	UniRef90	UniRef90_A0A7C6FS63	Phage tail protein	NA
UHGV-0200925_23	eggNOG-mapper	272562.CA_C0062	tail component	NA
UHGV-0200925_23	COG	COG4722	Phage-related protein YomH	NA
UHGV-0200925_23	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0200925_24	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0200925_24	UniRef90	UniRef90_A0A1Q6PU45	SH3b domain-containing protein	NA
UHGV-0200925_24	eggNOG-mapper	386415.NT01CX_2159	Phage minor structural protein	NA
UHGV-0200925_24	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0200925_24	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0200925_24	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0200925_24	COG	COG4926	Phage-related protein	NA
UHGV-0200925_24	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0200925_25	PHROG	phrog_372	tail protein	tail
UHGV-0200925_25	UniRef90	UniRef90_UPI001F1AF627	NA	NA
UHGV-0200925_25	eggNOG-mapper	1416759.AYMR01000009_gene3061	NA	NA
UHGV-0200925_25	Pfam	PF05895	NA	DUF859
UHGV-0200925_25	Structural annotation	PF05895, MF_04116, NF010681, NF012201, COG3291	NA	NA
UHGV-0200925_26	Structural annotation	PF09792, NF033679	NA	NA
UHGV-0200925_27	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0200925_27	COG	COG3469	Chitinase	NA
UHGV-0200925_28	PHROG	phrog_21233	NA	unknown function
UHGV-0200925_28	UniRef90	UniRef90_A0A1Q6PTT3	Holin	NA
UHGV-0200925_28	eggNOG-mapper	1203606.HMPREF1526_00583	toxin secretion phage lysis holin	NA
UHGV-0200925_28	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0200925_28	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0200925_28	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0200925_28	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0200925_29	KOfam	K22519	PTAC5; protein disulfide-isomerase [EC:5.3.4.1]	NA
UHGV-0200925_29	PHROG	phrog_2649	endolysin	lysis
UHGV-0200925_29	UniRef90	UniRef90_A0A1Q6PTR5	PG_binding_1 domain-containing protein	NA
UHGV-0200925_29	eggNOG-mapper	871963.Desdi_1346	NLP P60 protein	NA
UHGV-0200925_29	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0200925_29	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0200925_29	Structural annotation	PF01471, PF19087, NF041850, TIGR02219, COG3409, COG3103, COG0791	NA	NA
UHGV-0200925_30	PHROG	phrog_2308	NA	unknown function
UHGV-0200925_30	UniRef90	UniRef90_A0A0J6WUL9	Sigma-70 region 4 type 2	NA
UHGV-0200925_30	eggNOG-mapper	1203606.HMPREF1526_00581	COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-0200925_30	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0200925_30	Structural annotation	PF06056, COG2771	NA	NA
UHGV-0200925_31	PHROG	phrog_2996	NA	unknown function
UHGV-0200925_31	Pfam	PF20612	SHOCT domain	SHOCT_2
UHGV-0200925_32	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0200925_32	PHROG	phrog_95	integrase	integration and excision
UHGV-0200925_32	UniRef90	UniRef90_A0A1Y4A4X4	Recombinase family protein	NA
UHGV-0200925_32	eggNOG-mapper	1378168.N510_01583	resolvase	NA
UHGV-0200925_32	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0200925_32	Pfam	PF07508	Recombinase	Recombinase
UHGV-0200925_32	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0200925_32	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0200925_32	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0200925_33	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0200925_33	PHROG	phrog_95	integrase	integration and excision
UHGV-0200925_33	UniRef90	UniRef90_UPI00058D1C31	recombinase family protein	NA
UHGV-0200925_33	eggNOG-mapper	573061.Clocel_0847	resolvase	NA
UHGV-0200925_33	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0200925_33	Pfam	PF07508	Recombinase	Recombinase
UHGV-0200925_33	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0200925_33	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0200925_33	Structural annotation	PF00239, PF07508, PF18822, NF041201, COG1961	NA	NA
UHGV-0200925_34	KOfam	K14059	int; integrase	NA
UHGV-0200925_34	PHROG	phrog_1	integrase	integration and excision
UHGV-0200925_34	UniRef90	UniRef90_A0A416ESW4	Site-specific integrase	NA
UHGV-0200925_34	eggNOG-mapper	1158602.I590_03592	Phage integrase SAM-like domain	NA
UHGV-0200925_34	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0200925_34	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0200925_34	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0200925_34	Structural annotation	PF00589, PF02920, MF_01808, TIGR02224, COG4974, COG3422	NA	NA
UHGV-0200925_35	Pfam	PF20612	SHOCT domain	SHOCT_2
UHGV-0200925_36	PHROG	phrog_95	integrase	integration and excision
UHGV-0200925_36	UniRef90	UniRef90_A0A832L644	Recombinase family protein (Fragment)	NA
UHGV-0200925_36	eggNOG-mapper	509191.AEDB02000019_gene4541	Resolvase, N terminal domain	NA
UHGV-0200925_36	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0200925	Yes	34,913 bps	56.82%	76.17%	0.9438
UHGV-2142681	No	21,145 bps	56.33%	45.00%	0.9515
UHGV-1800986	No	13,705 bps	58.04%	32.71%	0.9806
UHGV-0161888	No	13,623 bps	53.55%	22.70%	0.9029
UHGV-1809608	No	13,623 bps	53.55%	22.70%	0.9029
UHGV-1623439	No	10,580 bps	56.80%	17.57%	0.9567
UHGV-1612311	No	10,349 bps	56.95%	17.19%	0.9757