vOTU-017683

Overview

vOTU representative UHGV-1960562

No. of genomes 7

Genome length 26,071 bps

Completeness 68.68% (medium-quality)

Host Lachnospira eligens A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-017683
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00117 › vGENUS-00172 › vOTU-017683
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Lachnospira › Lachnospira eligens A
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1960562
BioSample	NA
Genome length	26,071 bps
CheckV completeness	68.68% (medium-quality)
CheckV contamination	0.00%
CDS count	36
CDS density	94.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1960562_1	KOfam	K06334	cotJC; spore coat protein JC	NA
UHGV-1960562_1	PHROG	phrog_7573	NA	unknown function
UHGV-1960562_1	UniRef90	UniRef90_A0A174Z0E5	Manganese catalase family protein	NA
UHGV-1960562_1	eggNOG-mapper	515620.EUBELI_00515	NA	NA
UHGV-1960562_1	Pfam	PF05067	Manganese containing catalase	Mn_catalase
UHGV-1960562_1	COG	COG3546	Mn-containing catalase (includes spore coat protein CotJC)	NA
UHGV-1960562_1	Structural annotation	PF05067, MF_00931, TIGR04535, COG3546	NA	NA
UHGV-1960562_3	KOfam	K07273	acm; lysozyme	NA
UHGV-1960562_3	PHROG	phrog_291	endolysin	lysis
UHGV-1960562_3	UniRef90	UniRef90_A0A356C4L5	LysM domain-containing protein	NA
UHGV-1960562_3	eggNOG-mapper	515620.EUBELI_01316	Glycoside Hydrolase Family 25-like lysozyme endolysin	NA
UHGV-1960562_3	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-1960562_3	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-1960562_3	Structural annotation	PF01183, NF007404, COG3757	NA	NA
UHGV-1960562_4	PHROG	phrog_199	holin	lysis
UHGV-1960562_4	UniRef90	UniRef90_A0A356C4Q2	Holin	NA
UHGV-1960562_4	eggNOG-mapper	483218.BACPEC_01140	Bacteriophage holin family	NA
UHGV-1960562_4	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-1960562_4	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-1960562_4	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-1960562_4	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-1960562_6	PHROG	phrog_2566	NA	unknown function
UHGV-1960562_7	PHROG	phrog_6616	tail protein	tail
UHGV-1960562_7	UniRef90	UniRef90_A0A356C4L7	Peptidase S74 domain-containing protein	NA
UHGV-1960562_7	eggNOG-mapper	1499683.CCFF01000014_gene3896	Phage minor structural protein	NA
UHGV-1960562_7	COG	COG4926	Phage-related protein	NA
UHGV-1960562_7	Structural annotation	PF16466, NF033848, COG3500	NA	NA
UHGV-1960562_8	PHROG	phrog_1401	NA	unknown function
UHGV-1960562_8	UniRef90	UniRef90_UPI0007099B7A	NA	NA
UHGV-1960562_8	eggNOG-mapper	1294142.CINTURNW_1705	NA	NA
UHGV-1960562_8	Structural annotation	PF07761	NA	NA
UHGV-1960562_9	PHROG	phrog_1194	NA	unknown function
UHGV-1960562_9	eggNOG-mapper	33035.JPJF01000093_gene2242	NA	NA
UHGV-1960562_9	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-1960562_10	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-1960562_10	UniRef90	UniRef90_R6TDK7	Phage-related protein-like protein	NA
UHGV-1960562_10	eggNOG-mapper	33035.JPJF01000093_gene2243	phage tail tape measure protein	NA
UHGV-1960562_10	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-1960562_10	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-1960562_11	PHROG	phrog_8355	NA	unknown function
UHGV-1960562_11	UniRef90	UniRef90_UPI0006BBA9AA	Gp15 family bacteriophage protein	NA
UHGV-1960562_11	eggNOG-mapper	1151292.QEW_2424	NA	NA
UHGV-1960562_12	PHROG	phrog_8300	NA	unknown function
UHGV-1960562_12	eggNOG-mapper	1151292.QEW_2425	NA	NA
UHGV-1960562_12	Structural annotation	PF06896	NA	NA
UHGV-1960562_13	PHROG	phrog_820	major tail protein	tail
UHGV-1960562_13	UniRef90	UniRef90_T3DDR1	Phage major tail 2 family protein	NA
UHGV-1960562_13	eggNOG-mapper	1151292.QEW_2426	NA	NA
UHGV-1960562_13	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-1960562_14	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-1960562_14	UniRef90	UniRef90_UPI001D068DAC	minor capsid protein	NA
UHGV-1960562_14	eggNOG-mapper	742740.HMPREF9474_03510	NA	NA
UHGV-1960562_14	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-1960562_14	Structural annotation	PF12691, COG5003	NA	NA
UHGV-1960562_15	eggNOG-mapper	742740.HMPREF9474_03509	NA	NA
UHGV-1960562_16	PHROG	phrog_8710	NA	unknown function
UHGV-1960562_16	eggNOG-mapper	742740.HMPREF9474_03508	NA	NA
UHGV-1960562_16	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-1960562_17	PHROG	phrog_541	head-tail adaptor	connector
UHGV-1960562_17	eggNOG-mapper	1304866.K413DRAFT_0783	NA	NA
UHGV-1960562_18	PHROG	phrog_1378	NA	unknown function
UHGV-1960562_18	eggNOG-mapper	1415775.U729_2606	NA	NA
UHGV-1960562_19	PHROG	phrog_422	major head protein	head and packaging
UHGV-1960562_19	UniRef90	UniRef90_A0A356C4N2	Capsid protein	NA
UHGV-1960562_19	eggNOG-mapper	742740.HMPREF9474_03505	NA	NA
UHGV-1960562_19	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-1960562_20	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-1960562_20	eggNOG-mapper	742740.HMPREF9474_03504	NA	NA
UHGV-1960562_21	PHROG	phrog_872	NA	unknown function
UHGV-1960562_21	eggNOG-mapper	397290.C810_05225	NA	NA
UHGV-1960562_21	dbAPIS	APIS052	NA	NA
UHGV-1960562_23	PHROG	phrog_581	minor head protein	head and packaging
UHGV-1960562_23	UniRef90	UniRef90_A0A413YU28	Minor capsid protein	NA
UHGV-1960562_23	eggNOG-mapper	1282664.H354_06636	Phage minor capsid protein 2	NA
UHGV-1960562_23	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-1960562_23	Structural annotation	PF06152	NA	NA
UHGV-1960562_24	PHROG	phrog_533	portal protein	head and packaging
UHGV-1960562_24	UniRef90	UniRef90_A0A3D5LTG9	Capsid protein	NA
UHGV-1960562_24	eggNOG-mapper	33035.JPJF01000093_gene2257	NA	NA
UHGV-1960562_24	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-1960562_25	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1960562_25	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-1960562_25	UniRef90	UniRef90_A0A413YU24	Terminase	NA
UHGV-1960562_25	eggNOG-mapper	1391647.AVSV01000003_gene1802	Phage terminase, large subunit, PBSX family	NA
UHGV-1960562_25	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1960562_25	COG	COG1783	Phage terminase large subunit	NA
UHGV-1960562_25	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1960562_26	PHROG	phrog_2538	terminase small subunit	head and packaging
UHGV-1960562_26	UniRef90	UniRef90_A0A1C5UE81	HTH_Tnp_1_2 domain-containing protein	NA
UHGV-1960562_26	eggNOG-mapper	320843.Q4ZBS0_9CAUD	DNA packaging	NA
UHGV-1960562_26	Pfam	PF13022	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
UHGV-1960562_26	Structural annotation	PF13022	NA	NA
UHGV-1960562_27	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-1960562_27	UniRef90	UniRef90_UPI0009BB8B35	RNA polymerase subunit sigma-24	NA
UHGV-1960562_27	eggNOG-mapper	397290.C810_01391	NA	NA
UHGV-1960562_27	Structural annotation	PF02996	NA	NA
UHGV-1960562_28	PHROG	phrog_625	NA	unknown function
UHGV-1960562_28	UniRef90	UniRef90_A0A413YU40	ASCH domain-containing protein	NA
UHGV-1960562_28	eggNOG-mapper	397290.C810_01502	NA	NA
UHGV-1960562_28	Structural annotation	PF12961, COG2028	NA	NA
UHGV-1960562_32	PHROG	phrog_8684	NA	unknown function
UHGV-1960562_32	UniRef90	UniRef90_A0A413YU53	YopX domain-containing protein	NA
UHGV-1960562_32	eggNOG-mapper	476272.RUMHYD_03337	NA	NA
UHGV-1960562_32	Pfam	PF09643	YopX protein	YopX
UHGV-1960562_32	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-1960562_33	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-1960562_33	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-1960562_33	UniRef90	UniRef90_A0A413YU08	HNH endonuclease	NA
UHGV-1960562_33	eggNOG-mapper	742740.HMPREF9474_03129	HNH endonuclease	NA
UHGV-1960562_33	Pfam	PF01844	HNH endonuclease	HNH
UHGV-1960562_33	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-1960562_33	Structural annotation	TIGR02646, COG1403	NA	NA
UHGV-1960562_35	PHROG	phrog_15077	NA	unknown function
UHGV-1960562_35	UniRef90	UniRef90_A0A174WLY0	NA	NA
UHGV-1960562_35	eggNOG-mapper	483218.BACPEC_01165	NA	NA
UHGV-1960562_35	Structural annotation	PF11300, NF038070	NA	NA
UHGV-1960562_36	PHROG	phrog_8470	NA	unknown function
UHGV-1960562_36	eggNOG-mapper	483218.BACPEC_01166	PcfJ-like protein	NA
UHGV-1960562_36	Pfam	PF14284	PcfJ-like protein	PcfJ

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1960562	Yes	26,071 bps	38.07%	68.68%	0.9812
UHGV-1521264	No	23,636 bps	38.03%	62.23%	0.9817
UHGV-1831835	No	17,602 bps	38.08%	46.32%	0.9819
UHGV-0108129	No	16,689 bps	38.92%	43.99%	0.9830
UHGV-1604003	No	16,689 bps	38.92%	43.99%	0.9830
UHGV-1761231	No	15,738 bps	38.23%	41.41%	0.9822
UHGV-1682036	No	12,806 bps	38.54%	33.47%	0.9829